RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 SUN1O94901 812 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 AGTP01019 485 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 H2AFZP0C0S5 128 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 USP17L8P0C7I0 530 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 RAB27AP51159 221 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 PTENP60484 403 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 GRM4Q14833 912 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 FAM26FQ5R3K3 315 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 SLC30A9Q6PML9 568 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 H2AFVQ71UI9 128 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 KRT25Q7Z3Z0 450 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 JAMLQ86YT9 394 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 PIDD1Q9HB75 910 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 AJAP1Q9UKB5 411 aaPredicted RBP13.26□□□□□ -0.29
ERBB3-219ENST00000551242 CASZ1Q86V15 1759 aa13.25□□□□□ -0.29
ERBB3-219ENST00000551242 ARAP2Q8WZ64 1704 aa13.25□□□□□ -0.29
ERBB3-219ENST00000551242 COL18A1P39060 1754 aa13.25□□□□□ -0.29
ERBB3-219ENST00000551242 NPHP3-ACAD11A0A0J9YXS1 232 aa13.25□□□□□ -0.29
ERBB3-219ENST00000551242 SPDYE5A6NIY4 337 aa13.25□□□□□ -0.29
ERBB3-219ENST00000551242 KIAA0391O15091 583 aaKnown RBP13.25□□□□□ -0.29
ERBB3-219ENST00000551242 KRT13P13646 458 aa13.25□□□□□ -0.29
ERBB3-219ENST00000551242 IGHMBP2P38935 993 aaKnown RBP13.25□□□□□ -0.29
ERBB3-219ENST00000551242 AUHQ13825 339 aaKnown RBP13.25□□□□□ -0.29
ERBB3-219ENST00000551242 CALCRLQ16602 461 aa13.25□□□□□ -0.29
ERBB3-219ENST00000551242 C10orf76Q5T2E6 689 aa13.25□□□□□ -0.29
ERBB3-219ENST00000551242 C6orf118Q5T5N4 469 aa13.25□□□□□ -0.29
ERBB3-219ENST00000551242 SUSD4Q5VX71 490 aa13.25□□□□□ -0.29
ERBB3-219ENST00000551242 GJB7Q6PEY0 223 aa13.25□□□□□ -0.29
ERBB3-219ENST00000551242 ANKRD42Q8N9B4 389 aa13.25□□□□□ -0.29
ERBB3-219ENST00000551242 GDAP1Q8TB36 358 aa13.25□□□□□ -0.29
ERBB3-219ENST00000551242 DNAJC19Q96DA6 116 aa13.25□□□□□ -0.29
ERBB3-219ENST00000551242 STX8Q9UNK0 236 aa13.25□□□□□ -0.29
ERBB3-219ENST00000551242 RASGRF2O14827 1237 aa13.25□□□□□ -0.29
ERBB3-219ENST00000551242 LIN7AO14910 233 aaPredicted RBP13.25□□□□□ -0.29
ERBB3-219ENST00000551242 SMIM24O75264 130 aa13.25□□□□□ -0.29
ERBB3-219ENST00000551242 LUC7L3O95232 432 aaKnown RBP13.25□□□□□ -0.29
ERBB3-219ENST00000551242 TDP2O95551 362 aa13.25□□□□□ -0.29
ERBB3-219ENST00000551242 GNAT1P11488 350 aa13.25□□□□□ -0.29
ERBB3-219ENST00000551242 ADAM9Q13443 819 aa13.25□□□□□ -0.29
ERBB3-219ENST00000551242 PLS1Q14651 629 aa13.25□□□□□ -0.29
ERBB3-219ENST00000551242 KIAA1755Q5JYT7 1200 aa13.25□□□□□ -0.29
ERBB3-219ENST00000551242 GALNT17Q6IS24 598 aa13.25□□□□□ -0.29
ERBB3-219ENST00000551242 BARGINQ6ZT62 677 aa13.25□□□□□ -0.29
ERBB3-219ENST00000551242 ASRGL1Q7L266 308 aa13.25□□□□□ -0.29
ERBB3-219ENST00000551242 EXOC3L1Q86VI1 746 aa13.25□□□□□ -0.29
ERBB3-219ENST00000551242 COL23A1Q86Y22 540 aaPredicted RBP13.25□□□□□ -0.29
ERBB3-219ENST00000551242 PIGBQ92521 554 aa13.25□□□□□ -0.29
ERBB3-219ENST00000551242 C18orf8Q96DM3 657 aa13.25□□□□□ -0.29
ERBB3-219ENST00000551242 IFT74Q96LB3 600 aa13.25□□□□□ -0.29
ERBB3-219ENST00000551242 MCM9Q9NXL9 1143 aa13.25□□□□□ -0.29
ERBB3-219ENST00000551242 AMFRQ9UKV5 643 aa13.25□□□□□ -0.29
ERBB3-219ENST00000551242 GOLGA6L10A0A0M3HER8 536 aa13.24□□□□□ -0.29
ERBB3-219ENST00000551242 DDX3XO00571 662 aaKnown RBP eCLIP13.24□□□□□ -0.297e-7■■■■□ 26.2
ERBB3-219ENST00000551242 FLOT1O75955 427 aa13.24□□□□□ -0.29
ERBB3-219ENST00000551242 FESP07332 822 aa13.24□□□□□ -0.29
ERBB3-219ENST00000551242 ABCB4P21439 1286 aa13.24□□□□□ -0.29
ERBB3-219ENST00000551242 MKRN4PQ13434 485 aaPredicted RBP13.24□□□□□ -0.29
ERBB3-219ENST00000551242 ANO7Q6IWH7 933 aa13.24□□□□□ -0.29
ERBB3-219ENST00000551242 TBC1D16Q8TBP0 767 aa13.24□□□□□ -0.29
ERBB3-219ENST00000551242 UTP4Q969X6 686 aaKnown RBP13.24□□□□□ -0.29
ERBB3-219ENST00000551242 TSC22D3Q99576 134 aa13.24□□□□□ -0.29
ERBB3-219ENST00000551242 ETNK1Q9HBU6 452 aa13.24□□□□□ -0.29
ERBB3-219ENST00000551242 PAPOLBQ9NRJ5 636 aaKnown RBP13.24□□□□□ -0.29
ERBB3-219ENST00000551242 CACNA1SQ13698 1873 aa13.24□□□□□ -0.29
ERBB3-219ENST00000551242 TMEM120BA0PK00 339 aa13.24□□□□□ -0.29
ERBB3-219ENST00000551242 KLRF2D3W0D1 207 aa13.24□□□□□ -0.29
ERBB3-219ENST00000551242 GH1P01241 217 aa13.24□□□□□ -0.29
ERBB3-219ENST00000551242 NEFHP12036 1026 aa13.24□□□□□ -0.29
ERBB3-219ENST00000551242 GALCP54803 685 aa13.24□□□□□ -0.29
ERBB3-219ENST00000551242 NKX1-1Q15270 411 aaPredicted RBP13.24□□□□□ -0.29
ERBB3-219ENST00000551242 LONRF1Q17RB8 773 aa13.24□□□□□ -0.29
ERBB3-219ENST00000551242 SPDYCQ5MJ68 293 aa13.24□□□□□ -0.29
ERBB3-219ENST00000551242 DPY19L2P1Q6NXN4 242 aa13.24□□□□□ -0.29
ERBB3-219ENST00000551242 SPATA21Q7Z572 469 aa13.24□□□□□ -0.29
ERBB3-219ENST00000551242 CCDC25Q86WR0 208 aa13.24□□□□□ -0.29
ERBB3-219ENST00000551242 MTMR9Q96QG7 549 aa13.24□□□□□ -0.29
ERBB3-219ENST00000551242 ZHX3Q9H4I2 956 aa13.24□□□□□ -0.29
ERBB3-219ENST00000551242 GRHL1Q9NZI5 618 aa13.24□□□□□ -0.29
ERBB3-219ENST00000551242 TMOD4Q9NZQ9 345 aa13.24□□□□□ -0.29
ERBB3-219ENST00000551242 JAG2Q9Y219 1238 aa13.24□□□□□ -0.29
ERBB3-219ENST00000551242 IGSF9BQ9UPX0 1349 aa13.23□□□□□ -0.29
ERBB3-219ENST00000551242 PCK1P35558 622 aa13.23□□□□□ -0.29
ERBB3-219ENST00000551242 RPL21P46778 160 aaKnown RBP13.23□□□□□ -0.29
ERBB3-219ENST00000551242 PAPOLAP51003 745 aaKnown RBP13.23□□□□□ -0.29
ERBB3-219ENST00000551242 MGAT5Q09328 741 aa13.23□□□□□ -0.29
ERBB3-219ENST00000551242 PSMD2Q13200 908 aa13.23□□□□□ -0.29
ERBB3-219ENST00000551242 SEPT2Q15019 361 aa13.23□□□□□ -0.29
ERBB3-219ENST00000551242 CEP63Q96MT8 703 aa13.23□□□□□ -0.29
ERBB3-219ENST00000551242 PLCD4Q9BRC7 762 aa13.23□□□□□ -0.29
ERBB3-219ENST00000551242 DCCP43146 1447 aa13.23□□□□□ -0.29
ERBB3-219ENST00000551242 DDX3YO15523 660 aaKnown RBP13.23□□□□□ -0.29
ERBB3-219ENST00000551242 AHCYL1O43865 530 aa13.23□□□□□ -0.29
ERBB3-219ENST00000551242 HIP1RO75146 1068 aa13.23□□□□□ -0.29
ERBB3-219ENST00000551242 PLCG2P16885 1265 aa13.23□□□□□ -0.29
ERBB3-219ENST00000551242 RPS6KA3P51812 740 aa13.23□□□□□ -0.29
ERBB3-219ENST00000551242 MXRA7P84157 204 aa13.23□□□□□ -0.29
ERBB3-219ENST00000551242 MECOMQ03112 1051 aa13.23□□□□□ -0.29
ERBB3-219ENST00000551242 ADCY1Q08828 1119 aa13.23□□□□□ -0.29
ERBB3-219ENST00000551242 KRT79Q5XKE5 535 aa13.23□□□□□ -0.29
ERBB3-219ENST00000551242 SYCE1Q8N0S2 351 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms