RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 TBC1D22AQ8WUA7 517 aa13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 SCFD1Q8WVM8 642 aa13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 ATXN2LQ8WWM7 1075 aaKnown RBP13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 SCLT1Q96NL6 688 aa13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 FMO2Q99518 471 aa13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 NOD2Q9HC29 1040 aa13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 PCDHA12Q9UN75 941 aa13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 MYH7BA7E2Y1 1941 aa13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 E9PMD0 336 aa13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 C6orf229H3BNL8 230 aa13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 RTN2O75298 545 aa13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 H2AFZP0C0S5 128 aa13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 EPS15P42566 896 aa13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 CLK2P49760 499 aaKnown RBP13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 GTF2IP78347 998 aa13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 GABPAQ06546 454 aa13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 ADAM9Q13443 819 aa13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 SLMAPQ14BN4 828 aa13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 VPS72Q15906 364 aa13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 DUPD1Q68J44 220 aa13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 H2AFVQ71UI9 128 aa13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 VPS36Q86VN1 386 aa13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 TBC1D16Q8TBP0 767 aa13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 TMEM109Q9BVC6 243 aa13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 EPB41L4BQ9H329 900 aa13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 PABPC3Q9H361 631 aaKnown RBP13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 DDX4Q9NQI0 724 aaKnown RBP13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 EMILIN3Q9NT22 766 aa13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 ZDHHC18Q9NUE0 388 aa13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 CNOT7Q9UIV1 285 aaKnown RBP13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 MYH4Q9Y623 1939 aa13.88□□□□□ -0.19
CALCOCO1-217ENST00000549935 TAF1LQ8IZX4 1826 aa13.87□□□□□ -0.19
CALCOCO1-217ENST00000549935 PITPNM2Q9BZ72 1349 aa13.87□□□□□ -0.19
CALCOCO1-217ENST00000549935 NPHP3-ACAD11A0A0J9YXS1 232 aa13.87□□□□□ -0.19
CALCOCO1-217ENST00000549935 FAM187AA6NFU0 413 aa13.87□□□□□ -0.19
CALCOCO1-217ENST00000549935 CCDC169A6NNP5 214 aa13.87□□□□□ -0.19
CALCOCO1-217ENST00000549935 USP17L10C9JJH3 530 aa13.87□□□□□ -0.19
CALCOCO1-217ENST00000549935 CTNND1O60716 968 aaKnown RBP13.87□□□□□ -0.19
CALCOCO1-217ENST00000549935 SCP2P22307 547 aa13.87□□□□□ -0.19
CALCOCO1-217ENST00000549935 JAM2P57087 298 aa13.87□□□□□ -0.19
CALCOCO1-217ENST00000549935 CRY2Q49AN0 593 aa13.87□□□□□ -0.19
CALCOCO1-217ENST00000549935 PPP1R18Q6NYC8 613 aa13.87□□□□□ -0.19
CALCOCO1-217ENST00000549935 KCTD1Q719H9 257 aa13.87□□□□□ -0.19
CALCOCO1-217ENST00000549935 ZNF622Q969S3 477 aaKnown RBP eCLIP13.87□□□□□ -0.194e-7■■■□□ 18.3
CALCOCO1-217ENST00000549935 SPAG5Q96R06 1193 aa13.87□□□□□ -0.19
CALCOCO1-217ENST00000549935 PSTPIP2Q9H939 334 aa13.87□□□□□ -0.19
CALCOCO1-217ENST00000549935 BATF3Q9NR55 127 aa13.87□□□□□ -0.19
CALCOCO1-217ENST00000549935 KIAA1024Q9UPX6 916 aa13.87□□□□□ -0.19
CALCOCO1-217ENST00000549935 TRAF3IP3Q9Y228 551 aa13.87□□□□□ -0.19
CALCOCO1-217ENST00000549935 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.87□□□□□ -0.19
CALCOCO1-217ENST00000549935 IGKV6D-41A0A0C4DH26 115 aa13.87□□□□□ -0.19
CALCOCO1-217ENST00000549935 CCDC189A1A4V9 331 aa13.87□□□□□ -0.19
CALCOCO1-217ENST00000549935 PON1P27169 355 aa13.87□□□□□ -0.19
CALCOCO1-217ENST00000549935 ZNF268Q14587 947 aaPredicted RBP13.87□□□□□ -0.19
CALCOCO1-217ENST00000549935 ENOX2Q16206 610 aaKnown RBP13.87□□□□□ -0.19
CALCOCO1-217ENST00000549935 FMNL3Q8IVF7 1028 aa13.87□□□□□ -0.19
CALCOCO1-217ENST00000549935 RBM17Q96I25 401 aaKnown RBP13.87□□□□□ -0.19
CALCOCO1-217ENST00000549935 FAXDC2Q96IV6 333 aa13.87□□□□□ -0.19
CALCOCO1-217ENST00000549935 NAP1L3Q99457 506 aaPredicted RBP13.87□□□□□ -0.19
CALCOCO1-217ENST00000549935 MXD3Q9BW11 206 aa13.87□□□□□ -0.19
CALCOCO1-217ENST00000549935 ADAM7Q9H2U9 754 aa13.87□□□□□ -0.19
CALCOCO1-217ENST00000549935 SERPINB13Q9UIV8 391 aa13.87□□□□□ -0.19
CALCOCO1-217ENST00000549935 HDAC9Q9UKV0 1011 aa13.87□□□□□ -0.19
CALCOCO1-217ENST00000549935 NCANO14594 1321 aa13.86□□□□□ -0.19
CALCOCO1-217ENST00000549935 FOCADQ5VW36 1801 aa13.86□□□□□ -0.19
CALCOCO1-217ENST00000549935 POTEB3A0JP26 581 aa13.86□□□□□ -0.19
CALCOCO1-217ENST00000549935 POTECB2RU33 542 aa13.86□□□□□ -0.19
CALCOCO1-217ENST00000549935 TULP1O00294 542 aaPredicted RBP13.86□□□□□ -0.19
CALCOCO1-217ENST00000549935 MPHOSPH10O00566 681 aaKnown RBP13.86□□□□□ -0.19
CALCOCO1-217ENST00000549935 OPLAHO14841 1288 aa13.86□□□□□ -0.19
CALCOCO1-217ENST00000549935 ZBTB5O15062 677 aa13.86□□□□□ -0.19
CALCOCO1-217ENST00000549935 RAD21O60216 631 aa13.86□□□□□ -0.19
CALCOCO1-217ENST00000549935 CAND2O75155 1236 aa13.86□□□□□ -0.19
CALCOCO1-217ENST00000549935 AFPP02771 609 aaKnown RBP13.86□□□□□ -0.19
CALCOCO1-217ENST00000549935 ALADP13716 330 aa13.86□□□□□ -0.19
CALCOCO1-217ENST00000549935 CHN1P15882 459 aa13.86□□□□□ -0.19
CALCOCO1-217ENST00000549935 GBP1P32455 592 aa13.86□□□□□ -0.19
CALCOCO1-217ENST00000549935 EXOC3L4Q17RC7 722 aa13.86□□□□□ -0.19
CALCOCO1-217ENST00000549935 HERC4Q5GLZ8 1057 aaPredicted RBP13.86□□□□□ -0.19
CALCOCO1-217ENST00000549935 POTEBQ6S5H4 581 aa13.86□□□□□ -0.19
CALCOCO1-217ENST00000549935 COL23A1Q86Y22 540 aaPredicted RBP13.86□□□□□ -0.19
CALCOCO1-217ENST00000549935 CCDC63Q8NA47 563 aa13.86□□□□□ -0.19
CALCOCO1-217ENST00000549935 CERKQ8TCT0 537 aa13.86□□□□□ -0.19
CALCOCO1-217ENST00000549935 ERP44Q9BS26 406 aa13.86□□□□□ -0.19
CALCOCO1-217ENST00000549935 CARD9Q9H257 536 aa13.86□□□□□ -0.19
CALCOCO1-217ENST00000549935 GOLPH3Q9H4A6 298 aa13.86□□□□□ -0.19
CALCOCO1-217ENST00000549935 KCNMB3Q9NPA1 279 aa13.86□□□□□ -0.19
CALCOCO1-217ENST00000549935 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.86□□□□□ -0.19
CALCOCO1-217ENST00000549935 AMFRQ9UKV5 643 aa13.86□□□□□ -0.19
CALCOCO1-217ENST00000549935 PNMA2Q9UL42 364 aa13.86□□□□□ -0.19
CALCOCO1-217ENST00000549935 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 USP17L15C9J2P7 530 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 USP17L13C9JLJ4 530 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 USP17L11C9JVI0 530 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 USP17L18D6R9N7 530 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 USP17L22D6RA61 530 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 USP17L17D6RBQ6 530 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 USP17L19D6RCP7 530 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 USP17L20D6RJB6 530 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms