RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 SPG21Q9NZD8 308 aa12.36□□□□□ -0.43
TRAFD1-206ENST00000549358 DNAH14Q0VDD8 3507 aa12.36□□□□□ -0.43
TRAFD1-206ENST00000549358 LAMA4Q16363 1823 aa12.36□□□□□ -0.43
TRAFD1-206ENST00000549358 SPTBN4Q9H254 2564 aa12.35□□□□□ -0.43
TRAFD1-206ENST00000549358 C2orf71A6NGG8 1288 aa12.35□□□□□ -0.43
TRAFD1-206ENST00000549358 PPM1AP35813 382 aa12.35□□□□□ -0.43
TRAFD1-206ENST00000549358 ACTR2P61160 394 aa12.35□□□□□ -0.43
TRAFD1-206ENST00000549358 WTAPQ15007 396 aa12.35□□□□□ -0.43
TRAFD1-206ENST00000549358 UBE2SQ16763 222 aa12.35□□□□□ -0.43
TRAFD1-206ENST00000549358 KIZQ2M2Z5 673 aa12.35□□□□□ -0.43
TRAFD1-206ENST00000549358 CATIPQ7Z7H3 387 aa12.35□□□□□ -0.43
TRAFD1-206ENST00000549358 CCDC105Q8IYK2 499 aa12.35□□□□□ -0.43
TRAFD1-206ENST00000549358 ABI1Q8IZP0 508 aa12.35□□□□□ -0.43
TRAFD1-206ENST00000549358 DTWD2Q8NBA8 298 aa12.35□□□□□ -0.43
TRAFD1-206ENST00000549358 TMEM117Q9H0C3 514 aa12.35□□□□□ -0.43
TRAFD1-206ENST00000549358 KCNH7Q9NS40 1196 aa12.35□□□□□ -0.43
TRAFD1-206ENST00000549358 SEC63Q9UGP8 760 aaKnown RBP12.35□□□□□ -0.43
TRAFD1-206ENST00000549358 KAT6AQ92794 2004 aa12.34□□□□□ -0.43
TRAFD1-206ENST00000549358 SPDYE3A6NKU9 549 aa12.34□□□□□ -0.43
TRAFD1-206ENST00000549358 HIP1O00291 1037 aa12.34□□□□□ -0.43
TRAFD1-206ENST00000549358 CXCL14O95715 111 aa12.34□□□□□ -0.43
TRAFD1-206ENST00000549358 EOMESO95936 686 aa12.34□□□□□ -0.43
TRAFD1-206ENST00000549358 CRYBB1P53674 252 aaPredicted RBP12.34□□□□□ -0.43
TRAFD1-206ENST00000549358 B4GALNT3Q6L9W6 998 aa12.34□□□□□ -0.43
TRAFD1-206ENST00000549358 FAM228AQ86W67 206 aa12.34□□□□□ -0.43
TRAFD1-206ENST00000549358 TMEM87AQ8NBN3 555 aa12.34□□□□□ -0.43
TRAFD1-206ENST00000549358 OSMRQ99650 979 aa12.34□□□□□ -0.43
TRAFD1-206ENST00000549358 SDF4Q9BRK5 362 aa12.34□□□□□ -0.43
TRAFD1-206ENST00000549358 CYP26B1Q9NR63 512 aa12.34□□□□□ -0.43
TRAFD1-206ENST00000549358 FBXL21Q9UKT6 434 aa12.34□□□□□ -0.43
TRAFD1-206ENST00000549358 PCDHA6Q9UN73 950 aa12.34□□□□□ -0.43
TRAFD1-206ENST00000549358 USTQ9Y2C2 406 aa12.34□□□□□ -0.43
TRAFD1-206ENST00000549358 PCDHA8Q9Y5H6 950 aa12.34□□□□□ -0.43
TRAFD1-206ENST00000549358 STK25O00506 426 aa12.33□□□□□ -0.44
TRAFD1-206ENST00000549358 HOXA2O43364 376 aa12.33□□□□□ -0.44
TRAFD1-206ENST00000549358 KRT37O76014 449 aa12.33□□□□□ -0.44
TRAFD1-206ENST00000549358 LMNAP02545 664 aaKnown RBP12.33□□□□□ -0.44
TRAFD1-206ENST00000549358 HDAC1Q13547 482 aaPredicted RBP12.33□□□□□ -0.44
TRAFD1-206ENST00000549358 TDGQ13569 410 aa12.33□□□□□ -0.44
TRAFD1-206ENST00000549358 SART3Q15020 963 aaKnown RBP12.33□□□□□ -0.44
TRAFD1-206ENST00000549358 KIAA1841Q6NSI8 718 aa12.33□□□□□ -0.44
TRAFD1-206ENST00000549358 TMC5Q6UXY8 1006 aa12.33□□□□□ -0.44
TRAFD1-206ENST00000549358 SIX5Q8N196 739 aa12.33□□□□□ -0.44
TRAFD1-206ENST00000549358 SLC39A11Q8N1S5 342 aa12.33□□□□□ -0.44
TRAFD1-206ENST00000549358 LRRC43Q8N309 656 aa12.33□□□□□ -0.44
TRAFD1-206ENST00000549358 RNF169Q8NCN4 708 aa12.33□□□□□ -0.44
TRAFD1-206ENST00000549358 CYP2W1Q8TAV3 490 aa12.33□□□□□ -0.44
TRAFD1-206ENST00000549358 FEZF2Q8TBJ5 459 aa12.33□□□□□ -0.44
TRAFD1-206ENST00000549358 ACSF2Q96CM8 615 aaPredicted RBP12.33□□□□□ -0.44
TRAFD1-206ENST00000549358 RTP3Q9BQQ7 232 aa12.33□□□□□ -0.44
TRAFD1-206ENST00000549358 MXRA8Q9BRK3 442 aa12.33□□□□□ -0.44
TRAFD1-206ENST00000549358 MYL10Q9BUA6 226 aa12.33□□□□□ -0.44
TRAFD1-206ENST00000549358 SPZ1Q9BXG8 430 aa12.33□□□□□ -0.44
TRAFD1-206ENST00000549358 IL25Q9H293 177 aa12.33□□□□□ -0.44
TRAFD1-206ENST00000549358 RNF19AQ9NV58 838 aa12.33□□□□□ -0.44
TRAFD1-206ENST00000549358 FNDC1Q4ZHG4 1894 aaPredicted RBP12.33□□□□□ -0.44
TRAFD1-206ENST00000549358 NT5C1B-RDH14C9J2C7 533 aa12.32□□□□□ -0.44
TRAFD1-206ENST00000549358 BACH1O14867 736 aa12.32□□□□□ -0.44
TRAFD1-206ENST00000549358 HBP1O60381 514 aa12.32□□□□□ -0.44
TRAFD1-206ENST00000549358 ATG7O95352 703 aa12.32□□□□□ -0.44
TRAFD1-206ENST00000549358 EPCAMP16422 314 aa12.32□□□□□ -0.44
TRAFD1-206ENST00000549358 SLC26A2P50443 739 aa12.32□□□□□ -0.44
TRAFD1-206ENST00000549358 ITGB3BPQ13352 177 aaPredicted RBP12.32□□□□□ -0.44
TRAFD1-206ENST00000549358 DSC3Q14574 896 aa12.32□□□□□ -0.44
TRAFD1-206ENST00000549358 BMS1Q14692 1282 aaKnown RBP12.32□□□□□ -0.44
TRAFD1-206ENST00000549358 RALYLQ86SE5 291 aaKnown RBP12.32□□□□□ -0.44
TRAFD1-206ENST00000549358 PLEKHM2Q8IWE5 1019 aa12.32□□□□□ -0.44
TRAFD1-206ENST00000549358 CMTR1Q8N1G2 835 aaKnown RBP12.32□□□□□ -0.44
TRAFD1-206ENST00000549358 CTCFLQ8NI51 663 aaPredicted RBP12.32□□□□□ -0.44
TRAFD1-206ENST00000549358 AUTS2Q8WXX7 1259 aa12.32□□□□□ -0.44
TRAFD1-206ENST00000549358 HINFPQ9BQA5 517 aa12.32□□□□□ -0.44
TRAFD1-206ENST00000549358 SEMA4AQ9H3S1 761 aa12.32□□□□□ -0.44
TRAFD1-206ENST00000549358 DZANK1Q9NVP4 752 aa12.32□□□□□ -0.44
TRAFD1-206ENST00000549358 R4GN57 208 aa12.32□□□□□ -0.44
TRAFD1-206ENST00000549358 NFASCO94856 1347 aa12.32□□□□□ -0.44
TRAFD1-206ENST00000549358 DMXL1Q9Y485 3027 aa12.32□□□□□ -0.44
TRAFD1-206ENST00000549358 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.31□□□□□ -0.44
TRAFD1-206ENST00000549358 hCG_1642624A0A1W2PR95 340 aa12.31□□□□□ -0.44
TRAFD1-206ENST00000549358 GPR32O75388 356 aa12.31□□□□□ -0.44
TRAFD1-206ENST00000549358 VTNP04004 478 aa12.31□□□□□ -0.44
TRAFD1-206ENST00000549358 CYP21A2P08686 494 aa12.31□□□□□ -0.44
TRAFD1-206ENST00000549358 ZSCAN20P17040 1043 aaPredicted RBP12.31□□□□□ -0.44
TRAFD1-206ENST00000549358 SMARCA1P28370 1054 aa12.31□□□□□ -0.44
TRAFD1-206ENST00000549358 KIF5BP33176 963 aa12.31□□□□□ -0.44
TRAFD1-206ENST00000549358 ALDH7A1P49419 539 aaKnown RBP12.31□□□□□ -0.44
TRAFD1-206ENST00000549358 METAP2P50579 478 aaKnown RBP eCLIP12.31□□□□□ -0.44
TRAFD1-206ENST00000549358 PUM1Q14671 1186 aaKnown RBP eCLIP12.31□□□□□ -0.44
TRAFD1-206ENST00000549358 ZNF484Q5JVG2 852 aa12.31□□□□□ -0.44
TRAFD1-206ENST00000549358 TRMT1LQ7Z2T5 733 aaKnown RBP12.31□□□□□ -0.44
TRAFD1-206ENST00000549358 CABP7Q86V35 215 aa12.31□□□□□ -0.44
TRAFD1-206ENST00000549358 RASEFQ8IZ41 740 aa12.31□□□□□ -0.44
TRAFD1-206ENST00000549358 VPS52Q8N1B4 723 aa12.31□□□□□ -0.44
TRAFD1-206ENST00000549358 SRBD1Q8N5C6 995 aaKnown RBP12.31□□□□□ -0.44
TRAFD1-206ENST00000549358 METTL13Q8N6R0 699 aa12.31□□□□□ -0.44
TRAFD1-206ENST00000549358 NCOA7Q8NI08 942 aa12.31□□□□□ -0.44
TRAFD1-206ENST00000549358 IGDCC4Q8TDY8 1250 aa12.31□□□□□ -0.44
TRAFD1-206ENST00000549358 KIF12Q96FN5 646 aa12.31□□□□□ -0.44
TRAFD1-206ENST00000549358 OSBPL3Q9H4L5 887 aa12.31□□□□□ -0.44
TRAFD1-206ENST00000549358 KCNK12Q9HB15 430 aa12.31□□□□□ -0.44
TRAFD1-206ENST00000549358 CACNA1HO95180 2353 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms