RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 PSMC6P62333 389 aa12.12□□□□□ -0.47
LINC00661-204ENST00000549354 ARHGAP44Q17R89 818 aa12.12□□□□□ -0.47
LINC00661-204ENST00000549354 GPBP1Q86WP2 473 aa12.12□□□□□ -0.47
LINC00661-204ENST00000549354 PCDHA12Q9UN75 941 aa12.12□□□□□ -0.47
LINC00661-204ENST00000549354 ASTN2O75129 1339 aaPredicted RBP12.12□□□□□ -0.47
LINC00661-204ENST00000549354 ABCB11O95342 1321 aa12.12□□□□□ -0.47
LINC00661-204ENST00000549354 PVALEFA0A1B0GWK0 134 aa12.12□□□□□ -0.47
LINC00661-204ENST00000549354 RSPH10B2B2RC85 870 aa12.12□□□□□ -0.47
LINC00661-204ENST00000549354 WDR46O15213 610 aaKnown RBP12.12□□□□□ -0.47
LINC00661-204ENST00000549354 BUB1BO60566 1050 aaPredicted RBP12.12□□□□□ -0.47
LINC00661-204ENST00000549354 RSPH10BP0C881 870 aa12.12□□□□□ -0.47
LINC00661-204ENST00000549354 SLC9A1P19634 815 aa12.12□□□□□ -0.47
LINC00661-204ENST00000549354 ZNF76P36508 570 aa12.12□□□□□ -0.47
LINC00661-204ENST00000549354 SPIRE1Q08AE8 756 aa12.12□□□□□ -0.47
LINC00661-204ENST00000549354 CCDC170Q8IYT3 715 aa12.12□□□□□ -0.47
LINC00661-204ENST00000549354 RAD54LQ92698 747 aa12.12□□□□□ -0.47
LINC00661-204ENST00000549354 FAM20AQ96MK3 541 aa12.12□□□□□ -0.47
LINC00661-204ENST00000549354 NUP58Q9BVL2 599 aa12.12□□□□□ -0.47
LINC00661-204ENST00000549354 TLR10Q9BXR5 811 aa12.12□□□□□ -0.47
LINC00661-204ENST00000549354 LRRN2O75325 713 aa12.11□□□□□ -0.47
LINC00661-204ENST00000549354 KLRC1P26715 233 aa12.11□□□□□ -0.47
LINC00661-204ENST00000549354 INPP5BP32019 993 aa12.11□□□□□ -0.47
LINC00661-204ENST00000549354 PPP1R2P41236 205 aa12.11□□□□□ -0.47
LINC00661-204ENST00000549354 DHX9Q08211 1270 aaKnown RBP12.11□□□□□ -0.47
LINC00661-204ENST00000549354 PPFIA1Q13136 1202 aa12.11□□□□□ -0.47
LINC00661-204ENST00000549354 FAM182AQ5T1J6 154 aa12.11□□□□□ -0.47
LINC00661-204ENST00000549354 CFAP58Q5T655 872 aa12.11□□□□□ -0.47
LINC00661-204ENST00000549354 APOBEC3FQ8IUX4 373 aaKnown RBP12.11□□□□□ -0.47
LINC00661-204ENST00000549354 HOOK2Q96ED9 719 aa12.11□□□□□ -0.47
LINC00661-204ENST00000549354 WDR18Q9BV38 432 aa12.11□□□□□ -0.47
LINC00661-204ENST00000549354 PLAGL2Q9UPG8 496 aa12.11□□□□□ -0.47
LINC00661-204ENST00000549354 MRPL11Q9Y3B7 192 aaKnown RBP12.11□□□□□ -0.47
LINC00661-204ENST00000549354 STK24Q9Y6E0 443 aa12.11□□□□□ -0.47
LINC00661-204ENST00000549354 TARSL2A2RTX5 802 aaKnown RBP12.11□□□□□ -0.47
LINC00661-204ENST00000549354 SPDYE3A6NKU9 549 aa12.11□□□□□ -0.47
LINC00661-204ENST00000549354 SP4Q02446 784 aa12.11□□□□□ -0.47
LINC00661-204ENST00000549354 KLHL30Q0D2K2 578 aa12.11□□□□□ -0.47
LINC00661-204ENST00000549354 FAM114A1Q8IWE2 563 aa12.11□□□□□ -0.47
LINC00661-204ENST00000549354 GPC2Q8N158 579 aa12.11□□□□□ -0.47
LINC00661-204ENST00000549354 RNPC3Q96LT9 517 aaKnown RBP12.11□□□□□ -0.47
LINC00661-204ENST00000549354 LRRC27Q9C0I9 530 aa12.11□□□□□ -0.47
LINC00661-204ENST00000549354 PANK4Q9NVE7 773 aa12.11□□□□□ -0.47
LINC00661-204ENST00000549354 GPRC5DQ9NZD1 345 aa12.11□□□□□ -0.47
LINC00661-204ENST00000549354 RGL1Q9NZL6 768 aa12.11□□□□□ -0.47
LINC00661-204ENST00000549354 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.11□□□□□ -0.47
LINC00661-204ENST00000549354 PPP2R3BQ9Y5P8 575 aa12.11□□□□□ -0.47
LINC00661-204ENST00000549354 SBF1O95248 1867 aa12.11□□□□□ -0.47
LINC00661-204ENST00000549354 ZNF536O15090 1300 aa12.11□□□□□ -0.47
LINC00661-204ENST00000549354 KDM3AQ9Y4C1 1321 aa12.11□□□□□ -0.47
LINC00661-204ENST00000549354 ADAM9Q13443 819 aa12.11□□□□□ -0.47
LINC00661-204ENST00000549354 KCTD17Q8N5Z5 321 aa12.11□□□□□ -0.47
LINC00661-204ENST00000549354 ZNF341Q9BYN7 854 aa12.11□□□□□ -0.47
LINC00661-204ENST00000549354 DDX47Q9H0S4 455 aaKnown RBP12.11□□□□□ -0.47
LINC00661-204ENST00000549354 GJA3Q9Y6H8 435 aa12.11□□□□□ -0.47
LINC00661-204ENST00000549354 CASP5P51878 434 aa12.1□□□□□ -0.47
LINC00661-204ENST00000549354 ZNF211Q13398 564 aaPredicted RBP12.1□□□□□ -0.47
LINC00661-204ENST00000549354 CEP85LQ5SZL2 805 aa12.1□□□□□ -0.47
LINC00661-204ENST00000549354 DCAF15Q66K64 600 aa12.1□□□□□ -0.47
LINC00661-204ENST00000549354 CHADLQ6NUI6 762 aa12.1□□□□□ -0.47
LINC00661-204ENST00000549354 EFCAB13Q8IY85 973 aa12.1□□□□□ -0.47
LINC00661-204ENST00000549354 SAMD3Q8N6K7 520 aa12.1□□□□□ -0.47
LINC00661-204ENST00000549354 RPGRIP1Q96KN7 1286 aa12.1□□□□□ -0.47
LINC00661-204ENST00000549354 NOX5Q96PH1 765 aa12.1□□□□□ -0.47
LINC00661-204ENST00000549354 NT5C3AQ9H0P0 336 aa12.1□□□□□ -0.47
LINC00661-204ENST00000549354 DNAJC17Q9NVM6 304 aaKnown RBP12.1□□□□□ -0.47
LINC00661-204ENST00000549354 IGLV3-22A0A075B6J6 115 aa12.1□□□□□ -0.47
LINC00661-204ENST00000549354 A0A087X0T9 212 aa12.1□□□□□ -0.47
LINC00661-204ENST00000549354 LOC102724159A0A0B4J2E5 919 aa12.1□□□□□ -0.47
LINC00661-204ENST00000549354 ANO9A1A5B4 782 aa12.1□□□□□ -0.47
LINC00661-204ENST00000549354 FAM86B1E9PN63 330 aa12.1□□□□□ -0.47
LINC00661-204ENST00000549354 EIF3HO15372 352 aaKnown RBP eCLIP12.1□□□□□ -0.47
LINC00661-204ENST00000549354 RPS6KA5O75582 802 aa12.1□□□□□ -0.47
LINC00661-204ENST00000549354 ICAM1P05362 532 aa12.1□□□□□ -0.47
LINC00661-204ENST00000549354 FAM86B2P0C5J1 330 aa12.1□□□□□ -0.47
LINC00661-204ENST00000549354 FAM228BP0C875 321 aa12.1□□□□□ -0.47
LINC00661-204ENST00000549354 LMNB1P20700 586 aa12.1□□□□□ -0.47
LINC00661-204ENST00000549354 PWP2Q15269 919 aaKnown RBP12.1□□□□□ -0.47
LINC00661-204ENST00000549354 FOXR2Q6PJQ5 311 aa12.1□□□□□ -0.47
LINC00661-204ENST00000549354 DNAH12Q6ZR08 3092 aa12.1□□□□□ -0.47
LINC00661-204ENST00000549354 GCOM1H8Y6P7 765 aaPredicted RBP12.09□□□□□ -0.47
LINC00661-204ENST00000549354 POLR2MP0CAP2 368 aa12.09□□□□□ -0.47
LINC00661-204ENST00000549354 HSD17B4P51659 736 aa12.09□□□□□ -0.47
LINC00661-204ENST00000549354 IRX3P78415 501 aaPredicted RBP12.09□□□□□ -0.47
LINC00661-204ENST00000549354 FAM26FQ5R3K3 315 aa12.09□□□□□ -0.47
LINC00661-204ENST00000549354 NBPF12Q5TAG4 269 aaPredicted RBP12.09□□□□□ -0.47
LINC00661-204ENST00000549354 KLHDC7AQ5VTJ3 777 aa12.09□□□□□ -0.47
LINC00661-204ENST00000549354 UNC13DQ70J99 1090 aa12.09□□□□□ -0.47
LINC00661-204ENST00000549354 PRPF38AQ8NAV1 312 aaKnown RBP12.09□□□□□ -0.47
LINC00661-204ENST00000549354 UBLCP1Q8WVY7 318 aaPredicted RBP12.09□□□□□ -0.47
LINC00661-204ENST00000549354 ADAM33Q9BZ11 813 aa12.09□□□□□ -0.47
LINC00661-204ENST00000549354 CELF4Q9BZC1 486 aaKnown RBP12.09□□□□□ -0.47
LINC00661-204ENST00000549354 EFCC1Q9HA90 598 aa12.09□□□□□ -0.47
LINC00661-204ENST00000549354 PARP14Q460N5 1801 aa12.09□□□□□ -0.47
LINC00661-204ENST00000549354 SMCHD1A6NHR9 2005 aa12.09□□□□□ -0.47
LINC00661-204ENST00000549354 A0A087WUV0 522 aaPredicted RBP12.09□□□□□ -0.47
LINC00661-204ENST00000549354 CYP2J2P51589 502 aa12.09□□□□□ -0.47
LINC00661-204ENST00000549354 IFT88Q13099 833 aa12.09□□□□□ -0.47
LINC00661-204ENST00000549354 TAX1BP1Q86VP1 789 aa12.09□□□□□ -0.47
LINC00661-204ENST00000549354 LDHDQ86WU2 507 aa12.09□□□□□ -0.47
LINC00661-204ENST00000549354 OTUD6BQ8N6M0 293 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms