RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 SPATA31C1P0DKV0 1188 aa10.74□□□□□ -0.69
SMARCD1-205ENST00000548573 LMNB1P20700 586 aa10.74□□□□□ -0.69
SMARCD1-205ENST00000548573 TMOD1P28289 359 aa10.74□□□□□ -0.69
SMARCD1-205ENST00000548573 SHMT1P34896 483 aa10.74□□□□□ -0.69
SMARCD1-205ENST00000548573 GALCP54803 685 aa10.74□□□□□ -0.69
SMARCD1-205ENST00000548573 PTENP60484 403 aa10.74□□□□□ -0.69
SMARCD1-205ENST00000548573 PSMC6P62333 389 aa10.74□□□□□ -0.69
SMARCD1-205ENST00000548573 PPATQ06203 517 aa10.74□□□□□ -0.69
SMARCD1-205ENST00000548573 PABPC4Q13310 644 aaKnown RBP eCLIP10.74□□□□□ -0.69
SMARCD1-205ENST00000548573 NFIL3Q16649 462 aa10.74□□□□□ -0.69
SMARCD1-205ENST00000548573 LACTB2Q53H82 288 aaPredicted RBP10.74□□□□□ -0.69
SMARCD1-205ENST00000548573 TCERG1LQ5VWI1 586 aa10.74□□□□□ -0.69
SMARCD1-205ENST00000548573 KCTD1Q719H9 257 aa10.74□□□□□ -0.69
SMARCD1-205ENST00000548573 DNAAF5Q86Y56 855 aa10.74□□□□□ -0.69
SMARCD1-205ENST00000548573 FMNL3Q8IVF7 1028 aa10.74□□□□□ -0.69
SMARCD1-205ENST00000548573 U2AF1L4Q8WU68 220 aaKnown RBP10.74□□□□□ -0.69
SMARCD1-205ENST00000548573 RFFLQ8WZ73 363 aa10.74□□□□□ -0.69
SMARCD1-205ENST00000548573 TATDN2Q93075 761 aa10.74□□□□□ -0.69
SMARCD1-205ENST00000548573 TLCD1Q96CP7 247 aa10.74□□□□□ -0.69
SMARCD1-205ENST00000548573 BORCS6Q96GS4 357 aa10.74□□□□□ -0.69
SMARCD1-205ENST00000548573 NAP1L3Q99457 506 aaPredicted RBP10.74□□□□□ -0.69
SMARCD1-205ENST00000548573 OSBPL7Q9BZF2 842 aa10.74□□□□□ -0.69
SMARCD1-205ENST00000548573 CARD9Q9H257 536 aa10.74□□□□□ -0.69
SMARCD1-205ENST00000548573 DDX3YO15523 660 aaKnown RBP10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 SOX5P35711 763 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 MAGOHP61326 146 aaKnown RBP10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 ARHGAP4P98171 946 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 PDE4CQ08493 712 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 QPCTQ16769 361 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 PTPROQ16827 1216 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 QRICH1Q2TAL8 776 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 KRT71Q3SY84 523 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 CRY2Q49AN0 593 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 HOOK3Q86VS8 718 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 AMIGO3Q86WK7 504 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 CACNA2D3Q8IZS8 1091 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 OLIG1Q8TAK6 271 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 LNX1Q8TBB1 728 aaPredicted RBP10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 ATP8B4Q8TF62 1192 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 MAGOHBQ96A72 148 aaKnown RBP10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 CCDC114Q96M63 670 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 FAM20AQ96MK3 541 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 FMO2Q99518 471 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 SLC40A1Q9NP59 571 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 OLFML3Q9NRN5 406 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 DAAM1Q9Y4D1 1078 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 PCDHA1Q9Y5I3 950 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 FAM187AA6NFU0 413 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 MEIS2O14770 477 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 EVI5O60447 810 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 BUB1BO60566 1050 aaPredicted RBP10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 FGGP02679 453 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 NUDT17P0C025 328 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 GHRP10912 638 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 GAP43P17677 238 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 CASP4P49662 377 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 PLS1Q14651 629 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 SLC15A2Q16348 729 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 ANKRD20A8PQ5CZ79 823 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 GKAP1Q5VSY0 366 aaPredicted RBP10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 CCDC50Q8IVM0 306 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 PROCA1Q8NCQ7 364 aaPredicted RBP10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 SLC35G2Q8TBE7 412 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 TBC1D16Q8TBP0 767 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 CCDC17Q96LX7 622 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 SYT11Q9BT88 431 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 MKNK1Q9BUB5 465 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 STK33Q9BYT3 514 aa10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 CELF4Q9BZC1 486 aaKnown RBP10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 DDX4Q9NQI0 724 aaKnown RBP10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 CCNL1Q9UK58 526 aaPredicted RBP10.73□□□□□ -0.69
SMARCD1-205ENST00000548573 QSER1Q2KHR3 1735 aa10.72□□□□□ -0.69
SMARCD1-205ENST00000548573 GOLGA6L10A0A0M3HER8 536 aa10.72□□□□□ -0.69
SMARCD1-205ENST00000548573 DCDC2CA8MYV0 355 aa10.72□□□□□ -0.69
SMARCD1-205ENST00000548573 MEIS1O00470 390 aa10.72□□□□□ -0.69
SMARCD1-205ENST00000548573 EIF3DO15371 548 aaKnown RBP eCLIP10.72□□□□□ -0.69
SMARCD1-205ENST00000548573 PPP1R12BO60237 982 aaPredicted RBP10.72□□□□□ -0.69
SMARCD1-205ENST00000548573 TBCAO75347 108 aaKnown RBP10.72□□□□□ -0.69
SMARCD1-205ENST00000548573 BBOX1O75936 387 aa10.72□□□□□ -0.69
SMARCD1-205ENST00000548573 GCNT3O95395 438 aa10.72□□□□□ -0.69
SMARCD1-205ENST00000548573 CCDC172P0C7W6 258 aa10.72□□□□□ -0.69
SMARCD1-205ENST00000548573 PSMC2P35998 433 aaKnown RBP10.72□□□□□ -0.69
SMARCD1-205ENST00000548573 MAP2K2P36507 400 aa10.72□□□□□ -0.69
SMARCD1-205ENST00000548573 DRG2P55039 364 aaKnown RBP10.72□□□□□ -0.69
SMARCD1-205ENST00000548573 IFFO1Q0D2I5 559 aa10.72□□□□□ -0.69
SMARCD1-205ENST00000548573 BYSLQ13895 437 aaKnown RBP10.72□□□□□ -0.69
SMARCD1-205ENST00000548573 DHX34Q14147 1143 aaKnown RBP10.72□□□□□ -0.69
SMARCD1-205ENST00000548573 PRR16Q569H4 304 aa10.72□□□□□ -0.69
SMARCD1-205ENST00000548573 TRAPPC3LQ5T215 181 aa10.72□□□□□ -0.69
SMARCD1-205ENST00000548573 ERMARDQ5T6L9 678 aa10.72□□□□□ -0.69
SMARCD1-205ENST00000548573 DUPD1Q68J44 220 aa10.72□□□□□ -0.69
SMARCD1-205ENST00000548573 GJB7Q6PEY0 223 aa10.72□□□□□ -0.69
SMARCD1-205ENST00000548573 DCAF4Q8WV16 495 aa10.72□□□□□ -0.69
SMARCD1-205ENST00000548573 CTNNBL1Q8WYA6 563 aaPredicted RBP10.72□□□□□ -0.69
SMARCD1-205ENST00000548573 LENG9Q96B70 501 aa10.72□□□□□ -0.69
SMARCD1-205ENST00000548573 RBM17Q96I25 401 aaKnown RBP10.72□□□□□ -0.69
SMARCD1-205ENST00000548573 UIMC1Q96RL1 719 aa10.72□□□□□ -0.69
SMARCD1-205ENST00000548573 ERP44Q9BS26 406 aa10.72□□□□□ -0.69
SMARCD1-205ENST00000548573 POLR3CQ9BUI4 534 aaPredicted RBP10.72□□□□□ -0.69
SMARCD1-205ENST00000548573 DPH5Q9H2P9 285 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms