RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 RGL1Q9NZL6 768 aa13.31□□□□□ -0.28
YBX3-217ENST00000546164 SIP14410 1827 aa13.31□□□□□ -0.28
YBX3-217ENST00000546164 MICAL3Q7RTP6 2002 aa13.3□□□□□ -0.28
YBX3-217ENST00000546164 TMEM150BA6NC51 233 aa13.3□□□□□ -0.28
YBX3-217ENST00000546164 DDX11L8A8MPP1 907 aa13.3□□□□□ -0.28
YBX3-217ENST00000546164 RBAK-RBAKDNI3L0D1 243 aa13.3□□□□□ -0.28
YBX3-217ENST00000546164 GPR32O75388 356 aa13.3□□□□□ -0.28
YBX3-217ENST00000546164 MAFO75444 373 aaPredicted RBP13.3□□□□□ -0.28
YBX3-217ENST00000546164 SLITRK3O94933 977 aa13.3□□□□□ -0.28
YBX3-217ENST00000546164 CA3P07451 260 aa13.3□□□□□ -0.28
YBX3-217ENST00000546164 OR52Z1P0C646 297 aa13.3□□□□□ -0.28
YBX3-217ENST00000546164 CD52P31358 61 aa13.3□□□□□ -0.28
YBX3-217ENST00000546164 TOB1P50616 345 aaPredicted RBP13.3□□□□□ -0.28
YBX3-217ENST00000546164 CLCN3P51790 818 aa13.3□□□□□ -0.28
YBX3-217ENST00000546164 HTRA4P83105 476 aaPredicted RBP13.3□□□□□ -0.28
YBX3-217ENST00000546164 CDC42EP1Q00587 391 aa13.3□□□□□ -0.28
YBX3-217ENST00000546164 ZNF174Q15697 407 aa13.3□□□□□ -0.28
YBX3-217ENST00000546164 MTERF2Q49AM1 385 aa13.3□□□□□ -0.28
YBX3-217ENST00000546164 PPP2R2DQ66LE6 453 aa13.3□□□□□ -0.28
YBX3-217ENST00000546164 MYOCDQ8IZQ8 938 aa13.3□□□□□ -0.28
YBX3-217ENST00000546164 LRRC71Q8N4P6 559 aa13.3□□□□□ -0.28
YBX3-217ENST00000546164 TOP1MTQ969P6 601 aa13.3□□□□□ -0.28
YBX3-217ENST00000546164 DYDC2Q96IM9 177 aa13.3□□□□□ -0.28
YBX3-217ENST00000546164 EIF2AK1Q9BQI3 630 aaKnown RBP13.3□□□□□ -0.28
YBX3-217ENST00000546164 JPH2Q9BR39 696 aaPredicted RBP13.3□□□□□ -0.28
YBX3-217ENST00000546164 ADAMTS10Q9H324 1103 aa13.3□□□□□ -0.28
YBX3-217ENST00000546164 CYP26B1Q9NR63 512 aa13.3□□□□□ -0.28
YBX3-217ENST00000546164 PADI3Q9ULW8 664 aa13.3□□□□□ -0.28
YBX3-217ENST00000546164 TRANK1O15050 2925 aa13.3□□□□□ -0.28
YBX3-217ENST00000546164 MYO9BQ13459 2157 aa13.3□□□□□ -0.28
YBX3-217ENST00000546164 H3BQV1 296 aa13.29□□□□□ -0.28
YBX3-217ENST00000546164 ENPP3O14638 875 aa13.29□□□□□ -0.28
YBX3-217ENST00000546164 RPS6KA5O75582 802 aa13.29□□□□□ -0.28
YBX3-217ENST00000546164 VTNP04004 478 aa13.29□□□□□ -0.28
YBX3-217ENST00000546164 YWHABP31946 246 aaKnown RBP13.29□□□□□ -0.28
YBX3-217ENST00000546164 TAP1Q03518 808 aa13.29□□□□□ -0.28
YBX3-217ENST00000546164 PAK2Q13177 524 aa13.29□□□□□ -0.28
YBX3-217ENST00000546164 KIZQ2M2Z5 673 aa13.29□□□□□ -0.28
YBX3-217ENST00000546164 RILPL1Q5EBL4 403 aa13.29□□□□□ -0.28
YBX3-217ENST00000546164 ODR4Q5SWX8 454 aa13.29□□□□□ -0.28
YBX3-217ENST00000546164 OTUD6AQ7L8S5 288 aa13.29□□□□□ -0.28
YBX3-217ENST00000546164 TMCO2Q7Z6W1 182 aaPredicted RBP13.29□□□□□ -0.28
YBX3-217ENST00000546164 EXOC8Q8IYI6 725 aa13.29□□□□□ -0.28
YBX3-217ENST00000546164 C4orf32Q8N8J7 132 aa13.29□□□□□ -0.28
YBX3-217ENST00000546164 TMEM40Q8WWA1 233 aa13.29□□□□□ -0.28
YBX3-217ENST00000546164 LINC01599Q8WXQ3 324 aa13.29□□□□□ -0.28
YBX3-217ENST00000546164 INTS4Q96HW7 963 aaKnown RBP13.29□□□□□ -0.28
YBX3-217ENST00000546164 ZBED2Q9BTP6 218 aa13.29□□□□□ -0.28
YBX3-217ENST00000546164 SUGCTQ9HAC7 445 aa13.29□□□□□ -0.28
YBX3-217ENST00000546164 CDHR5Q9HBB8 845 aa13.29□□□□□ -0.28
YBX3-217ENST00000546164 ERVK-5Q9HDB9 667 aa13.29□□□□□ -0.28
YBX3-217ENST00000546164 AKT3Q9Y243 479 aa13.29□□□□□ -0.28
YBX3-217ENST00000546164 NOC2LQ9Y3T9 749 aaKnown RBP13.29□□□□□ -0.28
YBX3-217ENST00000546164 INSL6Q9Y581 213 aa13.29□□□□□ -0.28
YBX3-217ENST00000546164 PTPRSQ13332 1948 aa13.29□□□□□ -0.28
YBX3-217ENST00000546164 GBF1Q92538 1859 aa13.28□□□□□ -0.28
YBX3-217ENST00000546164 POTEMA6NI47 508 aa13.28□□□□□ -0.28
YBX3-217ENST00000546164 LAD1O00515 517 aa13.28□□□□□ -0.28
YBX3-217ENST00000546164 GPR182O15218 404 aa13.28□□□□□ -0.28
YBX3-217ENST00000546164 ARHGEF15O94989 841 aa13.28□□□□□ -0.28
YBX3-217ENST00000546164 RFC5P40937 340 aa13.28□□□□□ -0.28
YBX3-217ENST00000546164 GPC3P51654 580 aa13.28□□□□□ -0.28
YBX3-217ENST00000546164 NPEPPSP55786 919 aa13.28□□□□□ -0.28
YBX3-217ENST00000546164 NLRP11P59045 1033 aaKnown RBP13.28□□□□□ -0.28
YBX3-217ENST00000546164 CYP4A11Q02928 519 aa13.28□□□□□ -0.28
YBX3-217ENST00000546164 CTTNQ14247 550 aaKnown RBP13.28□□□□□ -0.28
YBX3-217ENST00000546164 LARP1BQ659C4 914 aaKnown RBP13.28□□□□□ -0.28
YBX3-217ENST00000546164 PLA2G4FQ68DD2 849 aa13.28□□□□□ -0.28
YBX3-217ENST00000546164 TPH2Q8IWU9 490 aa13.28□□□□□ -0.28
YBX3-217ENST00000546164 MYLIPQ8WY64 445 aa13.28□□□□□ -0.28
YBX3-217ENST00000546164 SNX21Q969T3 373 aa13.28□□□□□ -0.28
YBX3-217ENST00000546164 CEP170P1Q96L14 293 aa13.28□□□□□ -0.28
YBX3-217ENST00000546164 OSMRQ99650 979 aa13.28□□□□□ -0.28
YBX3-217ENST00000546164 TSPYL2Q9H2G4 693 aaPredicted RBP13.28□□□□□ -0.28
YBX3-217ENST00000546164 TMX1Q9H3N1 280 aa13.28□□□□□ -0.28
YBX3-217ENST00000546164 DHX33Q9H6R0 707 aaKnown RBP13.28□□□□□ -0.28
YBX3-217ENST00000546164 TUFT1Q9NNX1 390 aa13.28□□□□□ -0.28
YBX3-217ENST00000546164 ANKEF1Q9NU02 776 aa13.28□□□□□ -0.28
YBX3-217ENST00000546164 GINS2Q9Y248 185 aa13.28□□□□□ -0.28
YBX3-217ENST00000546164 EVPLQ92817 2033 aa13.28□□□□□ -0.28
YBX3-217ENST00000546164 COL4A6Q14031 1691 aa13.28□□□□□ -0.28
YBX3-217ENST00000546164 LCHNA4D1U4 455 aa13.27□□□□□ -0.29
YBX3-217ENST00000546164 K7ELQ4 463 aaPredicted RBP13.27□□□□□ -0.29
YBX3-217ENST00000546164 GAS2O43903 313 aaKnown RBP13.27□□□□□ -0.29
YBX3-217ENST00000546164 SPATA31C1P0DKV0 1188 aa13.27□□□□□ -0.29
YBX3-217ENST00000546164 XRCC6P12956 609 aaKnown RBP eCLIP13.27□□□□□ -0.29
YBX3-217ENST00000546164 PDCP20941 246 aa13.27□□□□□ -0.29
YBX3-217ENST00000546164 EIF4BP23588 611 aaKnown RBP13.27□□□□□ -0.29
YBX3-217ENST00000546164 DNM2P50570 870 aa13.27□□□□□ -0.29
YBX3-217ENST00000546164 DRP2Q13474 957 aa13.27□□□□□ -0.29
YBX3-217ENST00000546164 NBR1Q14596 966 aa13.27□□□□□ -0.29
YBX3-217ENST00000546164 TMEM266Q2M3C6 531 aa13.27□□□□□ -0.29
YBX3-217ENST00000546164 MCTP1Q6DN14 999 aa13.27□□□□□ -0.29
YBX3-217ENST00000546164 RTN4RL1Q86UN2 441 aaPredicted RBP13.27□□□□□ -0.29
YBX3-217ENST00000546164 ZNF410Q86VK4 478 aa13.27□□□□□ -0.29
YBX3-217ENST00000546164 FAM228AQ86W67 206 aa13.27□□□□□ -0.29
YBX3-217ENST00000546164 CRIPAKQ8N1N5 446 aa13.27□□□□□ -0.29
YBX3-217ENST00000546164 ZNF579Q8NAF0 562 aaKnown RBP13.27□□□□□ -0.29
YBX3-217ENST00000546164 SLC7A3Q8WY07 619 aa13.27□□□□□ -0.29
YBX3-217ENST00000546164 SH2D3AQ9BRG2 576 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms