RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 ST3GAL5Q9UNP4 418 aa22.41■■□□□ 1.18
CHD4-213ENST00000545584 PCDHB7Q9Y5E2 793 aa22.41■■□□□ 1.18
CHD4-213ENST00000545584 ZNF862O60290 1169 aa22.4■■□□□ 1.18
CHD4-213ENST00000545584 CLCN3P51790 818 aa22.4■■□□□ 1.18
CHD4-213ENST00000545584 AK2P54819 239 aa22.4■■□□□ 1.18
CHD4-213ENST00000545584 LETM2Q2VYF4 491 aa22.4■■□□□ 1.18
CHD4-213ENST00000545584 MBOAT7Q96N66 472 aa22.4■■□□□ 1.18
CHD4-213ENST00000545584 NECAB3Q96P71 396 aaPredicted RBP22.4■■□□□ 1.18
CHD4-213ENST00000545584 ADAM2Q99965 735 aa22.4■■□□□ 1.18
CHD4-213ENST00000545584 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.39■■□□□ 1.17
CHD4-213ENST00000545584 GPR32O75388 356 aa22.39■■□□□ 1.17
CHD4-213ENST00000545584 NLRP11P59045 1033 aaKnown RBP22.39■■□□□ 1.17
CHD4-213ENST00000545584 TBC1D8BQ0IIM8 1120 aa22.39■■□□□ 1.17
CHD4-213ENST00000545584 UGCGQ16739 394 aa22.39■■□□□ 1.17
CHD4-213ENST00000545584 PAN2Q504Q3 1202 aaKnown RBP22.39■■□□□ 1.17
CHD4-213ENST00000545584 CRIPAKQ8N1N5 446 aa22.39■■□□□ 1.17
CHD4-213ENST00000545584 RGS18Q9NS28 235 aa22.39■■□□□ 1.17
CHD4-213ENST00000545584 ORC3Q9UBD5 711 aaPredicted RBP22.39■■□□□ 1.17
CHD4-213ENST00000545584 WDR81Q562E7 1941 aa22.39■■□□□ 1.17
CHD4-213ENST00000545584 CENPBP07199 599 aaPredicted RBP22.38■■□□□ 1.17
CHD4-213ENST00000545584 LINC00271P0C7V0 271 aa22.38■■□□□ 1.17
CHD4-213ENST00000545584 GCFC2P16383 781 aaKnown RBP22.38■■□□□ 1.17
CHD4-213ENST00000545584 KCNA5P22460 613 aa22.38■■□□□ 1.17
CHD4-213ENST00000545584 XKR3Q5GH77 459 aa22.38■■□□□ 1.17
CHD4-213ENST00000545584 TCEAL5Q5H9L2 206 aa22.38■■□□□ 1.17
CHD4-213ENST00000545584 SLC24A5Q71RS6 500 aa22.38■■□□□ 1.17
CHD4-213ENST00000545584 NEK8Q86SG6 692 aa22.38■■□□□ 1.17
CHD4-213ENST00000545584 FAM228AQ86W67 206 aa22.38■■□□□ 1.17
CHD4-213ENST00000545584 LRRC71Q8N4P6 559 aa22.38■■□□□ 1.17
CHD4-213ENST00000545584 ETNPPLQ8TBG4 499 aa22.38■■□□□ 1.17
CHD4-213ENST00000545584 SCLT1Q96NL6 688 aa22.38■■□□□ 1.17
CHD4-213ENST00000545584 NAP1L4Q99733 375 aaKnown RBP22.38■■□□□ 1.17
CHD4-213ENST00000545584 SEPT9Q9UHD8 586 aaPredicted RBP22.38■■□□□ 1.17
CHD4-213ENST00000545584 MRPL42Q9Y6G3 142 aaKnown RBP22.38■■□□□ 1.17
CHD4-213ENST00000545584 NCOR1O75376 2440 aa22.38■■□□□ 1.17
CHD4-213ENST00000545584 REV3LO60673 3130 aa22.37■■□□□ 1.17
CHD4-213ENST00000545584 GRM6O15303 877 aa22.37■■□□□ 1.17
CHD4-213ENST00000545584 MGEA5O60502 916 aa22.37■■□□□ 1.17
CHD4-213ENST00000545584 LEXMQ3ZCV2 418 aa22.37■■□□□ 1.17
CHD4-213ENST00000545584 NAALADL2Q58DX5 795 aa22.37■■□□□ 1.17
CHD4-213ENST00000545584 P2RX5Q93086 422 aa22.37■■□□□ 1.17
CHD4-213ENST00000545584 FAM20AQ96MK3 541 aa22.37■■□□□ 1.17
CHD4-213ENST00000545584 BRWD1Q9NSI6 2320 aa22.37■■□□□ 1.17
CHD4-213ENST00000545584 SPTBN5Q9NRC6 3674 aaKnown RBP22.36■■□□□ 1.17
CHD4-213ENST00000545584 NCK2O43639 380 aa22.36■■□□□ 1.17
CHD4-213ENST00000545584 MARCH6O60337 910 aa22.36■■□□□ 1.17
CHD4-213ENST00000545584 MTERF2Q49AM1 385 aa22.36■■□□□ 1.17
CHD4-213ENST00000545584 B3GNT9Q6UX72 402 aa22.36■■□□□ 1.17
CHD4-213ENST00000545584 EP400NLQ6ZTU2 488 aa22.36■■□□□ 1.17
CHD4-213ENST00000545584 PIK3AP1Q6ZUJ8 805 aa22.36■■□□□ 1.17
CHD4-213ENST00000545584 LINC01465Q8N7H1 131 aa22.36■■□□□ 1.17
CHD4-213ENST00000545584 NIFKQ9BYG3 293 aaKnown RBP22.36■■□□□ 1.17
CHD4-213ENST00000545584 BRMS1Q9HCU9 246 aa22.36■■□□□ 1.17
CHD4-213ENST00000545584 C9IYK1 514 aa22.35■■□□□ 1.17
CHD4-213ENST00000545584 SLC37A4O43826 429 aa22.35■■□□□ 1.17
CHD4-213ENST00000545584 DKC1O60832 514 aaKnown RBP eCLIP22.35■■□□□ 1.17
CHD4-213ENST00000545584 CTDNEP1O95476 244 aa22.35■■□□□ 1.17
CHD4-213ENST00000545584 ZSCAN20P17040 1043 aaPredicted RBP22.35■■□□□ 1.17
CHD4-213ENST00000545584 EIF4BP23588 611 aaKnown RBP22.35■■□□□ 1.17
CHD4-213ENST00000545584 CDC42EP1Q00587 391 aa22.35■■□□□ 1.17
CHD4-213ENST00000545584 TARBP2Q15633 366 aaKnown RBP22.35■■□□□ 1.17
CHD4-213ENST00000545584 SPOUT1Q5T280 376 aaKnown RBP22.35■■□□□ 1.17
CHD4-213ENST00000545584 PPP4R3AQ6IN85 833 aa22.35■■□□□ 1.17
CHD4-213ENST00000545584 NECAB1Q8N987 351 aa22.35■■□□□ 1.17
CHD4-213ENST00000545584 PABPC5Q96DU9 382 aaKnown RBP22.35■■□□□ 1.17
CHD4-213ENST00000545584 ATP6V0A4Q9HBG4 840 aa22.35■■□□□ 1.17
CHD4-213ENST00000545584 PLAGL2Q9UPG8 496 aa22.35■■□□□ 1.17
CHD4-213ENST00000545584 DDX11L8A8MPP1 907 aa22.34■■□□□ 1.17
CHD4-213ENST00000545584 CCNT1O60563 726 aaKnown RBP22.34■■□□□ 1.17
CHD4-213ENST00000545584 MMP1P03956 469 aa22.34■■□□□ 1.17
CHD4-213ENST00000545584 KRT2P35908 639 aa22.34■■□□□ 1.17
CHD4-213ENST00000545584 GATMP50440 423 aa22.34■■□□□ 1.17
CHD4-213ENST00000545584 DNM2P50570 870 aa22.34■■□□□ 1.17
CHD4-213ENST00000545584 GPC3P51654 580 aa22.34■■□□□ 1.17
CHD4-213ENST00000545584 NEK4P51957 841 aa22.34■■□□□ 1.17
CHD4-213ENST00000545584 PSMC5P62195 406 aa22.34■■□□□ 1.17
CHD4-213ENST00000545584 ME3Q16798 604 aa22.34■■□□□ 1.17
CHD4-213ENST00000545584 PUS10Q3MIT2 529 aaKnown RBP22.34■■□□□ 1.17
CHD4-213ENST00000545584 NLRP7Q8WX94 980 aa22.34■■□□□ 1.17
CHD4-213ENST00000545584 GTF3C6Q969F1 213 aa22.34■■□□□ 1.17
CHD4-213ENST00000545584 PPP2R3CQ969Q6 453 aa22.34■■□□□ 1.17
CHD4-213ENST00000545584 ADAMTS10Q9H324 1103 aa22.34■■□□□ 1.17
CHD4-213ENST00000545584 ELAC1Q9H777 363 aaKnown RBP22.34■■□□□ 1.17
CHD4-213ENST00000545584 ALG13Q9NP73 1137 aaKnown RBP22.34■■□□□ 1.17
CHD4-213ENST00000545584 AAASQ9NRG9 546 aa22.34■■□□□ 1.17
CHD4-213ENST00000545584 GJB4Q9NTQ9 266 aa22.34■■□□□ 1.17
CHD4-213ENST00000545584 TMEM161AQ9NX61 479 aa22.34■■□□□ 1.17
CHD4-213ENST00000545584 TBKBP1A7MCY6 615 aa22.33■■□□□ 1.17
CHD4-213ENST00000545584 TBX3O15119 743 aa22.33■■□□□ 1.17
CHD4-213ENST00000545584 DTNBO60941 627 aa22.33■■□□□ 1.17
CHD4-213ENST00000545584 PPP2R5CQ13362 524 aa22.33■■□□□ 1.17
CHD4-213ENST00000545584 DSC3Q14574 896 aa22.33■■□□□ 1.17
CHD4-213ENST00000545584 OXER1Q8TDS5 423 aa22.33■■□□□ 1.17
CHD4-213ENST00000545584 ZNF668Q96K58 619 aaPredicted RBP22.33■■□□□ 1.17
CHD4-213ENST00000545584 JPH2Q9BR39 696 aaPredicted RBP22.33■■□□□ 1.17
CHD4-213ENST00000545584 KCNMB3Q9NPA1 279 aa22.33■■□□□ 1.17
CHD4-213ENST00000545584 CLDND1Q9NY35 253 aa22.33■■□□□ 1.17
CHD4-213ENST00000545584 PCDHB12Q9Y5F1 795 aa22.33■■□□□ 1.17
CHD4-213ENST00000545584 HOXA2O43364 376 aa22.32■■□□□ 1.16
CHD4-213ENST00000545584 CSPG5O95196 566 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms