RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 TNNC1P63316 161 aa16.39■□□□□ 0.21
USP28-214ENST00000545540 DRAP1Q14919 205 aaPredicted RBP16.39■□□□□ 0.21
USP28-214ENST00000545540 ABCB5Q2M3G0 1257 aa16.39■□□□□ 0.21
USP28-214ENST00000545540 PHLDB2Q86SQ0 1253 aa16.39■□□□□ 0.21
USP28-214ENST00000545540 FAM186BQ8IYM0 893 aa16.39■□□□□ 0.21
USP28-214ENST00000545540 MDM1Q8TC05 714 aa16.39■□□□□ 0.21
USP28-214ENST00000545540 FBXO28Q9NVF7 368 aa16.39■□□□□ 0.21
USP28-214ENST00000545540 ATP8A1Q9Y2Q0 1164 aa16.39■□□□□ 0.21
USP28-214ENST00000545540 ECHS1P30084 290 aa16.39■□□□□ 0.21
USP28-214ENST00000545540 DLG4P78352 724 aa16.39■□□□□ 0.21
USP28-214ENST00000545540 ITIH3Q06033 890 aa16.39■□□□□ 0.21
USP28-214ENST00000545540 HYIQ5T013 277 aa16.39■□□□□ 0.21
USP28-214ENST00000545540 MIGA2Q7L4E1 593 aa16.39■□□□□ 0.21
USP28-214ENST00000545540 TADA2BQ86TJ2 420 aa16.39■□□□□ 0.21
USP28-214ENST00000545540 SP8Q8IXZ3 490 aa16.39■□□□□ 0.21
USP28-214ENST00000545540 LRRC57Q8N9N7 239 aa16.39■□□□□ 0.21
USP28-214ENST00000545540 ERMNQ8TAM6 284 aa16.39■□□□□ 0.21
USP28-214ENST00000545540 SLC35G2Q8TBE7 412 aa16.39■□□□□ 0.21
USP28-214ENST00000545540 TAF1DQ9H5J8 278 aaPredicted RBP16.39■□□□□ 0.21
USP28-214ENST00000545540 DNAJC12Q9UKB3 198 aa16.39■□□□□ 0.21
USP28-214ENST00000545540 SLFN12Q8IYM2 578 aa16.38■□□□□ 0.21
USP28-214ENST00000545540 SLC20A1Q8WUM9 679 aa16.38■□□□□ 0.21
USP28-214ENST00000545540 EDEM3Q9BZQ6 932 aa16.38■□□□□ 0.21
USP28-214ENST00000545540 NUCKS1Q9H1E3 243 aaKnown RBP16.38■□□□□ 0.21
USP28-214ENST00000545540 MYH4Q9Y623 1939 aa16.38■□□□□ 0.21
USP28-214ENST00000545540 ERLIN2O94905 339 aa16.38■□□□□ 0.21
USP28-214ENST00000545540 IFT88Q13099 833 aa16.38■□□□□ 0.21
USP28-214ENST00000545540 SYDE2Q5VT97 1194 aa16.38■□□□□ 0.21
USP28-214ENST00000545540 THAP2Q9H0W7 228 aa16.38■□□□□ 0.21
USP28-214ENST00000545540 ERVK-5Q9HDB9 667 aa16.38■□□□□ 0.21
USP28-214ENST00000545540 NOVA2Q9UNW9 492 aaKnown RBP16.38■□□□□ 0.21
USP28-214ENST00000545540 CAPN7Q9Y6W3 813 aa16.38■□□□□ 0.21
USP28-214ENST00000545540 MAST2Q6P0Q8 1798 aa16.38■□□□□ 0.21
USP28-214ENST00000545540 CALUO43852 315 aaPredicted RBP16.38■□□□□ 0.21
USP28-214ENST00000545540 SYN2Q92777 582 aaPredicted RBP16.38■□□□□ 0.21
USP28-214ENST00000545540 KAT5Q92993 513 aa16.38■□□□□ 0.21
USP28-214ENST00000545540 BTBD6Q96KE9 485 aa16.38■□□□□ 0.21
USP28-214ENST00000545540 TSPYL1Q9H0U9 437 aa16.38■□□□□ 0.21
USP28-214ENST00000545540 TOM1O60784 492 aa16.37■□□□□ 0.21
USP28-214ENST00000545540 FLOT1O75955 427 aa16.37■□□□□ 0.21
USP28-214ENST00000545540 SLITRK3O94933 977 aa16.37■□□□□ 0.21
USP28-214ENST00000545540 ARP10275 920 aa16.37■□□□□ 0.21
USP28-214ENST00000545540 MARCKSL1P49006 195 aa16.37■□□□□ 0.21
USP28-214ENST00000545540 DHX9Q08211 1270 aaKnown RBP16.37■□□□□ 0.21
USP28-214ENST00000545540 EDRF1Q3B7T1 1238 aa16.37■□□□□ 0.21
USP28-214ENST00000545540 ODR4Q5SWX8 454 aa16.37■□□□□ 0.21
USP28-214ENST00000545540 LRCH2Q5VUJ6 765 aa16.37■□□□□ 0.21
USP28-214ENST00000545540 GJD4Q96KN9 370 aaPredicted RBP16.37■□□□□ 0.21
USP28-214ENST00000545540 PI4KBQ9UBF8 816 aa16.37■□□□□ 0.21
USP28-214ENST00000545540 TSKSQ9UJT2 592 aa16.37■□□□□ 0.21
USP28-214ENST00000545540 PGRMC1O00264 195 aaKnown RBP16.37■□□□□ 0.21
USP28-214ENST00000545540 PPP1R18Q6NYC8 613 aa16.37■□□□□ 0.21
USP28-214ENST00000545540 FRMD5Q7Z6J6 570 aa16.37■□□□□ 0.21
USP28-214ENST00000545540 SYCP3Q8IZU3 236 aa16.37■□□□□ 0.21
USP28-214ENST00000545540 PRMT6Q96LA8 375 aaPredicted RBP16.37■□□□□ 0.21
USP28-214ENST00000545540 VAV3Q9UKW4 847 aa16.37■□□□□ 0.21
USP28-214ENST00000545540 PRR12Q9ULL5 1215 aa16.37■□□□□ 0.21
USP28-214ENST00000545540 TRAF3IP3Q9Y228 551 aa16.37■□□□□ 0.21
USP28-214ENST00000545540 GOLGA8IPA6NC78 632 aa16.36■□□□□ 0.21
USP28-214ENST00000545540 GOLGA8JA6NMD2 632 aa16.36■□□□□ 0.21
USP28-214ENST00000545540 BMP3P12645 472 aa16.36■□□□□ 0.21
USP28-214ENST00000545540 DGKZQ13574 1117 aa16.36■□□□□ 0.21
USP28-214ENST00000545540 PPM1EQ8WY54 764 aa16.36■□□□□ 0.21
USP28-214ENST00000545540 ATP6V1G3Q96LB4 118 aa16.36■□□□□ 0.21
USP28-214ENST00000545540 CSRNP1Q96S65 589 aa16.36■□□□□ 0.21
USP28-214ENST00000545540 CNOT8Q9UFF9 292 aaKnown RBP16.36■□□□□ 0.21
USP28-214ENST00000545540 FRMD3A2A2Y4 597 aa16.36■□□□□ 0.21
USP28-214ENST00000545540 H0YHG0 523 aa16.36■□□□□ 0.21
USP28-214ENST00000545540 CHRNA5P30532 468 aa16.36■□□□□ 0.21
USP28-214ENST00000545540 HOXA10P31260 410 aaPredicted RBP16.36■□□□□ 0.21
USP28-214ENST00000545540 INPP5BP32019 993 aa16.36■□□□□ 0.21
USP28-214ENST00000545540 STAT1P42224 750 aa16.36■□□□□ 0.21
USP28-214ENST00000545540 TYW1Q9NV66 732 aaKnown RBP16.36■□□□□ 0.21
USP28-214ENST00000545540 FOXN3O00409 490 aaPredicted RBP16.36■□□□□ 0.21
USP28-214ENST00000545540 KRT13P13646 458 aa16.36■□□□□ 0.21
USP28-214ENST00000545540 MARSP56192 900 aaKnown RBP16.36■□□□□ 0.21
USP28-214ENST00000545540 AOC3Q16853 763 aa16.36■□□□□ 0.21
USP28-214ENST00000545540 GLE1Q53GS7 698 aaKnown RBP16.36■□□□□ 0.21
USP28-214ENST00000545540 DCAF12L1Q5VU92 463 aa16.36■□□□□ 0.21
USP28-214ENST00000545540 EPM2AIP1Q7L775 607 aaPredicted RBP16.36■□□□□ 0.21
USP28-214ENST00000545540 CRAMP1Q96RY5 1269 aa16.36■□□□□ 0.21
USP28-214ENST00000545540 CCT8L2Q96SF2 557 aa16.36■□□□□ 0.21
USP28-214ENST00000545540 HOMER2Q9NSB8 354 aa16.36■□□□□ 0.21
USP28-214ENST00000545540 SNX24Q9Y343 169 aa16.36■□□□□ 0.21
USP28-214ENST00000545540 PLIN4Q96Q06 1357 aa16.36■□□□□ 0.21
USP28-214ENST00000545540 GOLGA6L10A6NI86 522 aa16.35■□□□□ 0.21
USP28-214ENST00000545540 PDXKO00764 312 aa16.35■□□□□ 0.21
USP28-214ENST00000545540 SORBS3O60504 671 aa16.35■□□□□ 0.21
USP28-214ENST00000545540 MMP10P09238 476 aa16.35■□□□□ 0.21
USP28-214ENST00000545540 NT5DC3Q86UY8 548 aa16.35■□□□□ 0.21
USP28-214ENST00000545540 FAM178BQ8IXR5 827 aa16.35■□□□□ 0.21
USP28-214ENST00000545540 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.35■□□□□ 0.217e-6■■■■□ 21.1
USP28-214ENST00000545540 GLIS2Q9BZE0 524 aaPredicted RBP16.35■□□□□ 0.21
USP28-214ENST00000545540 EXOC3O60645 756 aa16.35■□□□□ 0.21
USP28-214ENST00000545540 SLCO1A2P46721 670 aa16.35■□□□□ 0.21
USP28-214ENST00000545540 ZNF844Q08AG5 666 aa16.35■□□□□ 0.21
USP28-214ENST00000545540 QPCTQ16769 361 aa16.35■□□□□ 0.21
USP28-214ENST00000545540 SCFD2Q8WU76 684 aa16.35■□□□□ 0.21
USP28-214ENST00000545540 COG5Q9UP83 839 aa16.35■□□□□ 0.21
USP28-214ENST00000545540 MYO3BQ8WXR4 1341 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms