RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 MYH15Q9Y2K3 1946 aa13.26□□□□□ -0.29
LTBR-214ENST00000545445 TANC1Q9C0D5 1861 aa13.25□□□□□ -0.29
LTBR-214ENST00000545445 POTEMA6NI47 508 aa13.25□□□□□ -0.29
LTBR-214ENST00000545445 EML1O00423 815 aa13.25□□□□□ -0.29
LTBR-214ENST00000545445 BAIAP3O94812 1187 aa13.25□□□□□ -0.29
LTBR-214ENST00000545445 LGALS2P05162 132 aa13.25□□□□□ -0.29
LTBR-214ENST00000545445 RPA1P27694 616 aa13.25□□□□□ -0.29
LTBR-214ENST00000545445 TXLNAP40222 546 aa13.25□□□□□ -0.29
LTBR-214ENST00000545445 UBA7P41226 1012 aa13.25□□□□□ -0.29
LTBR-214ENST00000545445 QARSP47897 775 aaKnown RBP13.25□□□□□ -0.29
LTBR-214ENST00000545445 STAT5BP51692 787 aa13.25□□□□□ -0.29
LTBR-214ENST00000545445 PSMC5P62195 406 aa13.25□□□□□ -0.29
LTBR-214ENST00000545445 DEFB103AP81534 67 aa13.25□□□□□ -0.29
LTBR-214ENST00000545445 LEXMQ3ZCV2 418 aa13.25□□□□□ -0.29
LTBR-214ENST00000545445 ADALQ6DHV7 355 aa13.25□□□□□ -0.29
LTBR-214ENST00000545445 SWSAP1Q6NVH7 229 aa13.25□□□□□ -0.29
LTBR-214ENST00000545445 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.25□□□□□ -0.29
LTBR-214ENST00000545445 GLG1Q92896 1179 aa13.25□□□□□ -0.29
LTBR-214ENST00000545445 FAM167AQ96KS9 214 aa13.25□□□□□ -0.29
LTBR-214ENST00000545445 HSD17B14Q9BPX1 270 aa13.25□□□□□ -0.29
LTBR-214ENST00000545445 EIF2AK1Q9BQI3 630 aaKnown RBP13.25□□□□□ -0.29
LTBR-214ENST00000545445 ZBED2Q9BTP6 218 aa13.25□□□□□ -0.29
LTBR-214ENST00000545445 ZSWIM4Q9H7M6 989 aa13.25□□□□□ -0.29
LTBR-214ENST00000545445 ZNF302Q9NR11 478 aa13.25□□□□□ -0.29
LTBR-214ENST00000545445 ERAP1Q9NZ08 941 aa13.25□□□□□ -0.29
LTBR-214ENST00000545445 LMCD1Q9NZU5 365 aa13.25□□□□□ -0.29
LTBR-214ENST00000545445 PCDHA7Q9UN72 937 aa13.25□□□□□ -0.29
LTBR-214ENST00000545445 MAFBQ9Y5Q3 323 aaPredicted RBP13.25□□□□□ -0.29
LTBR-214ENST00000545445 BRWD1Q9NSI6 2320 aa13.25□□□□□ -0.29
LTBR-214ENST00000545445 WDFY4Q6ZS81 3184 aa13.24□□□□□ -0.29
LTBR-214ENST00000545445 KDM3AQ9Y4C1 1321 aa13.24□□□□□ -0.29
LTBR-214ENST00000545445 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.24□□□□□ -0.29
LTBR-214ENST00000545445 H3BRB1 525 aa13.24□□□□□ -0.29
LTBR-214ENST00000545445 LYPLA2O95372 231 aa13.24□□□□□ -0.29
LTBR-214ENST00000545445 F2P00734 622 aa13.24□□□□□ -0.29
LTBR-214ENST00000545445 CHMP4BP1P59074 171 aa13.24□□□□□ -0.29
LTBR-214ENST00000545445 BFSP2Q13515 415 aa13.24□□□□□ -0.29
LTBR-214ENST00000545445 UTP14CQ5TAP6 766 aaKnown RBP13.24□□□□□ -0.29
LTBR-214ENST00000545445 PTCRAQ6ISU1 281 aaPredicted RBP13.24□□□□□ -0.29
LTBR-214ENST00000545445 PDXDC2PQ6P474 469 aa13.24□□□□□ -0.29
LTBR-214ENST00000545445 CCDC60Q8IWA6 550 aaPredicted RBP13.24□□□□□ -0.29
LTBR-214ENST00000545445 TMEM87AQ8NBN3 555 aa13.24□□□□□ -0.29
LTBR-214ENST00000545445 FBXL18Q96ME1 805 aa13.24□□□□□ -0.29
LTBR-214ENST00000545445 C16orf70Q9BSU1 422 aa13.24□□□□□ -0.29
LTBR-214ENST00000545445 CCSER1Q9C0I3 900 aa13.24□□□□□ -0.29
LTBR-214ENST00000545445 NT5C3AQ9H0P0 336 aa13.24□□□□□ -0.29
LTBR-214ENST00000545445 CSRNP2Q9H175 543 aa13.24□□□□□ -0.29
LTBR-214ENST00000545445 TUT1Q9H6E5 874 aaKnown RBP13.24□□□□□ -0.29
LTBR-214ENST00000545445 SUGCTQ9HAC7 445 aa13.24□□□□□ -0.29
LTBR-214ENST00000545445 GABBR1Q9UBS5 961 aa13.24□□□□□ -0.29
LTBR-214ENST00000545445 NOD1Q9Y239 953 aa13.24□□□□□ -0.29
LTBR-214ENST00000545445 IGSF9BQ9UPX0 1349 aa13.23□□□□□ -0.29
LTBR-214ENST00000545445 A0A1W2PQ27 194 aa13.23□□□□□ -0.29
LTBR-214ENST00000545445 A0A1W2PQ64 194 aa13.23□□□□□ -0.29
LTBR-214ENST00000545445 A0A1W2PQD8 194 aa13.23□□□□□ -0.29
LTBR-214ENST00000545445 GOLGA6L4A6NEF3 574 aa13.23□□□□□ -0.29
LTBR-214ENST00000545445 GOLGA6L22H0YM25 854 aa13.23□□□□□ -0.29
LTBR-214ENST00000545445 SLITRK3O94933 977 aa13.23□□□□□ -0.29
LTBR-214ENST00000545445 XRCC6P12956 609 aaKnown RBP eCLIP13.23□□□□□ -0.29
LTBR-214ENST00000545445 ALADP13716 330 aa13.23□□□□□ -0.29
LTBR-214ENST00000545445 CCT6AP40227 531 aaKnown RBP13.23□□□□□ -0.29
LTBR-214ENST00000545445 HYIQ5T013 277 aa13.23□□□□□ -0.29
LTBR-214ENST00000545445 AXDND1Q5T1B0 1012 aaPredicted RBP13.23□□□□□ -0.29
LTBR-214ENST00000545445 NFRKBQ6P4R8 1299 aa13.23□□□□□ -0.29
LTBR-214ENST00000545445 CABP7Q86V35 215 aa13.23□□□□□ -0.29
LTBR-214ENST00000545445 C4orf19Q8IY42 314 aa13.23□□□□□ -0.29
LTBR-214ENST00000545445 SNX29Q8TEQ0 813 aa13.23□□□□□ -0.29
LTBR-214ENST00000545445 CALML4Q96GE6 196 aa13.23□□□□□ -0.29
LTBR-214ENST00000545445 DYDC2Q96IM9 177 aa13.23□□□□□ -0.29
LTBR-214ENST00000545445 CHAMP1Q96JM3 812 aa13.23□□□□□ -0.29
LTBR-214ENST00000545445 CLIC6Q96NY7 704 aa13.23□□□□□ -0.29
LTBR-214ENST00000545445 PCYT2Q99447 389 aa13.23□□□□□ -0.29
LTBR-214ENST00000545445 PYM1Q9BRP8 204 aaKnown RBP13.23□□□□□ -0.29
LTBR-214ENST00000545445 LXNQ9BS40 222 aa13.23□□□□□ -0.29
LTBR-214ENST00000545445 NRBP2Q9NSY0 501 aa13.23□□□□□ -0.29
LTBR-214ENST00000545445 FAM13BQ9NYF5 915 aa13.23□□□□□ -0.29
LTBR-214ENST00000545445 CCDC39Q9UFE4 941 aa13.23□□□□□ -0.29
LTBR-214ENST00000545445 TELO2Q9Y4R8 837 aa13.23□□□□□ -0.29
LTBR-214ENST00000545445 PTPRSQ13332 1948 aa13.22□□□□□ -0.29
LTBR-214ENST00000545445 LINC01553A4QN01 128 aa13.22□□□□□ -0.29
LTBR-214ENST00000545445 HAS3O00219 553 aa13.22□□□□□ -0.29
LTBR-214ENST00000545445 DCXO43602 365 aa13.22□□□□□ -0.29
LTBR-214ENST00000545445 HBP1O60381 514 aa13.22□□□□□ -0.29
LTBR-214ENST00000545445 SPATA31C1P0DKV0 1188 aa13.22□□□□□ -0.29
LTBR-214ENST00000545445 CMA1P23946 247 aa13.22□□□□□ -0.29
LTBR-214ENST00000545445 ERVK-21P61565 698 aa13.22□□□□□ -0.29
LTBR-214ENST00000545445 GRIN1Q05586 938 aa13.22□□□□□ -0.29
LTBR-214ENST00000545445 GPNMBQ14956 572 aa13.22□□□□□ -0.29
LTBR-214ENST00000545445 TCTN1Q2MV58 587 aa13.22□□□□□ -0.29
LTBR-214ENST00000545445 XKR3Q5GH77 459 aa13.22□□□□□ -0.29
LTBR-214ENST00000545445 FAM117BQ6P1L5 589 aa13.22□□□□□ -0.29
LTBR-214ENST00000545445 OTUD6AQ7L8S5 288 aa13.22□□□□□ -0.29
LTBR-214ENST00000545445 CATSPER3Q86XQ3 398 aa13.22□□□□□ -0.29
LTBR-214ENST00000545445 TPH2Q8IWU9 490 aa13.22□□□□□ -0.29
LTBR-214ENST00000545445 CKAP2LQ8IYA6 745 aa13.22□□□□□ -0.29
LTBR-214ENST00000545445 ATP8B4Q8TF62 1192 aa13.22□□□□□ -0.29
LTBR-214ENST00000545445 BBXQ8WY36 941 aaPredicted RBP13.22□□□□□ -0.29
LTBR-214ENST00000545445 KAT2BQ92831 832 aa13.22□□□□□ -0.29
LTBR-214ENST00000545445 CDK5RAP3Q96JB5 506 aa13.22□□□□□ -0.29
LTBR-214ENST00000545445 NACC1Q96RE7 527 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms