RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 KRT25Q7Z3Z0 450 aa8.35□□□□□ -1.07
CPSF7-224ENST00000544990 NECAB1Q8N987 351 aa8.35□□□□□ -1.07
CPSF7-224ENST00000544990 FAM200AQ8TCP9 573 aa8.35□□□□□ -1.07
CPSF7-224ENST00000544990 TBCKQ8TEA7 893 aa8.35□□□□□ -1.07
CPSF7-224ENST00000544990 ATP6V0A1Q93050 837 aa8.35□□□□□ -1.07
CPSF7-224ENST00000544990 SCLYQ96I15 445 aa8.35□□□□□ -1.07
CPSF7-224ENST00000544990 AIFM3Q96NN9 605 aa8.35□□□□□ -1.07
CPSF7-224ENST00000544990 PHF20Q9BVI0 1012 aa8.35□□□□□ -1.07
CPSF7-224ENST00000544990 WNT8AQ9H1J5 351 aa8.35□□□□□ -1.07
CPSF7-224ENST00000544990 BRMS1Q9HCU9 246 aa8.35□□□□□ -1.07
CPSF7-224ENST00000544990 KCNJ14Q9UNX9 436 aa8.35□□□□□ -1.07
CPSF7-224ENST00000544990 MAP4K5Q9Y4K4 846 aa8.35□□□□□ -1.07
CPSF7-224ENST00000544990 MYH9P35579 1960 aaKnown RBP8.35□□□□□ -1.07
CPSF7-224ENST00000544990 EMSYQ7Z589 1322 aa8.34□□□□□ -1.07
CPSF7-224ENST00000544990 SCN5AQ14524 2016 aa8.34□□□□□ -1.07
CPSF7-224ENST00000544990 IGLV3-22A0A075B6J6 115 aa8.34□□□□□ -1.07
CPSF7-224ENST00000544990 ESPNB1AK53 854 aa8.34□□□□□ -1.07
CPSF7-224ENST00000544990 DDX39AO00148 427 aaKnown RBP8.34□□□□□ -1.07
CPSF7-224ENST00000544990 ADAMTS3O15072 1205 aa8.34□□□□□ -1.07
CPSF7-224ENST00000544990 LGR5O75473 907 aa8.34□□□□□ -1.07
CPSF7-224ENST00000544990 LARGE1O95461 756 aa8.34□□□□□ -1.07
CPSF7-224ENST00000544990 CTDNEP1O95476 244 aa8.34□□□□□ -1.07
CPSF7-224ENST00000544990 CKBP12277 381 aa8.34□□□□□ -1.07
CPSF7-224ENST00000544990 SELPP16109 830 aa8.34□□□□□ -1.07
CPSF7-224ENST00000544990 SLC26A2P50443 739 aa8.34□□□□□ -1.07
CPSF7-224ENST00000544990 STAT5BP51692 787 aa8.34□□□□□ -1.07
CPSF7-224ENST00000544990 ACTR2P61160 394 aa8.34□□□□□ -1.07
CPSF7-224ENST00000544990 SMAD3P84022 425 aaKnown RBP8.34□□□□□ -1.07
CPSF7-224ENST00000544990 ZNF200P98182 395 aaPredicted RBP8.34□□□□□ -1.07
CPSF7-224ENST00000544990 KRT76Q01546 638 aa8.34□□□□□ -1.07
CPSF7-224ENST00000544990 RBL2Q08999 1139 aa8.34□□□□□ -1.07
CPSF7-224ENST00000544990 ITGB3BPQ13352 177 aaPredicted RBP8.34□□□□□ -1.07
CPSF7-224ENST00000544990 TRIM29Q14134 588 aa8.34□□□□□ -1.07
CPSF7-224ENST00000544990 RABEP1Q15276 862 aa8.34□□□□□ -1.07
CPSF7-224ENST00000544990 FAM160B1Q5W0V3 765 aa8.34□□□□□ -1.07
CPSF7-224ENST00000544990 MIS18BP1Q6P0N0 1132 aa8.34□□□□□ -1.07
CPSF7-224ENST00000544990 TRAF7Q6Q0C0 670 aa8.34□□□□□ -1.07
CPSF7-224ENST00000544990 LRRC8DQ7L1W4 858 aa8.34□□□□□ -1.07
CPSF7-224ENST00000544990 C16orf59Q7L2K0 433 aa8.34□□□□□ -1.07
CPSF7-224ENST00000544990 OTOP2Q7RTS6 562 aa8.34□□□□□ -1.07
CPSF7-224ENST00000544990 PLPPR4Q7Z2D5 763 aa8.34□□□□□ -1.07
CPSF7-224ENST00000544990 DEFB128Q7Z7B8 93 aa8.34□□□□□ -1.07
CPSF7-224ENST00000544990 NSUN7Q8NE18 718 aaKnown RBP8.34□□□□□ -1.07
CPSF7-224ENST00000544990 HERVK_113Q902F9 699 aa8.34□□□□□ -1.07
CPSF7-224ENST00000544990 FTOQ9C0B1 505 aaKnown RBP eCLIP8.34□□□□□ -1.07
CPSF7-224ENST00000544990 SH2B1Q9NRF2 756 aaPredicted RBP8.34□□□□□ -1.07
CPSF7-224ENST00000544990 SETD4Q9NVD3 440 aa8.34□□□□□ -1.07
CPSF7-224ENST00000544990 DNAAF2Q9NVR5 837 aaKnown RBP8.34□□□□□ -1.07
CPSF7-224ENST00000544990 TANC1Q9C0D5 1861 aa8.34□□□□□ -1.07
CPSF7-224ENST00000544990 RRN3P2A6NIE6 340 aa8.33□□□□□ -1.08
CPSF7-224ENST00000544990 M0R2N6 131 aa8.33□□□□□ -1.08
CPSF7-224ENST00000544990 BACH1O14867 736 aa8.33□□□□□ -1.08
CPSF7-224ENST00000544990 DHX15O43143 795 aaKnown RBP8.33□□□□□ -1.08
CPSF7-224ENST00000544990 TREHO43280 583 aa8.33□□□□□ -1.08
CPSF7-224ENST00000544990 CAND2O75155 1236 aa8.33□□□□□ -1.08
CPSF7-224ENST00000544990 BRD1O95696 1058 aa8.33□□□□□ -1.08
CPSF7-224ENST00000544990 RPLP2P05387 115 aaKnown RBP8.33□□□□□ -1.08
CPSF7-224ENST00000544990 FDPSP14324 419 aaKnown RBP8.33□□□□□ -1.08
CPSF7-224ENST00000544990 MARK3P27448 753 aa8.33□□□□□ -1.08
CPSF7-224ENST00000544990 HOXC8P31273 242 aa8.33□□□□□ -1.08
CPSF7-224ENST00000544990 KRT2P35908 639 aa8.33□□□□□ -1.08
CPSF7-224ENST00000544990 THPOP40225 353 aa8.33□□□□□ -1.08
CPSF7-224ENST00000544990 DHX9Q08211 1270 aaKnown RBP8.33□□□□□ -1.08
CPSF7-224ENST00000544990 PPFIA1Q13136 1202 aa8.33□□□□□ -1.08
CPSF7-224ENST00000544990 NPY5RQ15761 445 aa8.33□□□□□ -1.08
CPSF7-224ENST00000544990 Q4G0T1 1027 aa8.33□□□□□ -1.08
CPSF7-224ENST00000544990 ZNF746Q6NUN9 644 aaPredicted RBP8.33□□□□□ -1.08
CPSF7-224ENST00000544990 MOXD1Q6UVY6 613 aa8.33□□□□□ -1.08
CPSF7-224ENST00000544990 RSPH3Q86UC2 560 aa8.33□□□□□ -1.08
CPSF7-224ENST00000544990 SERINC5Q86VE9 423 aa8.33□□□□□ -1.08
CPSF7-224ENST00000544990 CCDC83Q8IWF9 413 aa8.33□□□□□ -1.08
CPSF7-224ENST00000544990 SMAP1Q8IYB5 467 aaPredicted RBP8.33□□□□□ -1.08
CPSF7-224ENST00000544990 LMBR1Q8WVP7 490 aa8.33□□□□□ -1.08
CPSF7-224ENST00000544990 DHX38Q92620 1227 aaKnown RBP8.33□□□□□ -1.08
CPSF7-224ENST00000544990 CTAGE1Q96RT6 745 aa8.33□□□□□ -1.08
CPSF7-224ENST00000544990 KIF2CQ99661 725 aa8.33□□□□□ -1.08
CPSF7-224ENST00000544990 NAP1L4Q99733 375 aaKnown RBP8.33□□□□□ -1.08
CPSF7-224ENST00000544990 LLPHQ9BRT6 129 aaKnown RBP8.33□□□□□ -1.08
CPSF7-224ENST00000544990 TEKT3Q9BXF9 490 aa8.33□□□□□ -1.08
CPSF7-224ENST00000544990 ZNF302Q9NR11 478 aa8.33□□□□□ -1.08
CPSF7-224ENST00000544990 TELO2Q9Y4R8 837 aa8.33□□□□□ -1.08
CPSF7-224ENST00000544990 SAMM50Q9Y512 469 aa8.33□□□□□ -1.08
CPSF7-224ENST00000544990 CYP3A7-CYP3A51PA0A087WV96 503 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 IGKV6D-21A0A0A0MT36 114 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 RSPH10B2B2RC85 870 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 MSH4O15457 936 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 HBP1O60381 514 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 GAS7O60861 476 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 PSAPP07602 524 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 RSPH10BP0C881 870 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 INSRRP14616 1297 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 GCFC2P16383 781 aaKnown RBP8.32□□□□□ -1.08
CPSF7-224ENST00000544990 CYP3A7P24462 503 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 SFNP31947 248 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 ADAM17P78536 824 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 HMGN5P82970 282 aaKnown RBP8.32□□□□□ -1.08
CPSF7-224ENST00000544990 SAFBQ15424 915 aaKnown RBP eCLIP8.32□□□□□ -1.08
CPSF7-224ENST00000544990 GRIK4Q16099 956 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 INF2Q27J81 1249 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 LETM2Q2VYF4 491 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms