RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 TXKP42681 527 aa12.82□□□□□ -0.36
YBX3-216ENST00000544622 CLCN3P51790 818 aa12.82□□□□□ -0.36
YBX3-216ENST00000544622 DRP2Q13474 957 aa12.82□□□□□ -0.36
YBX3-216ENST00000544622 ADGRE1Q14246 886 aa12.82□□□□□ -0.36
YBX3-216ENST00000544622 KIZQ2M2Z5 673 aa12.82□□□□□ -0.36
YBX3-216ENST00000544622 PPP2R2DQ66LE6 453 aa12.82□□□□□ -0.36
YBX3-216ENST00000544622 MYOCDQ8IZQ8 938 aa12.82□□□□□ -0.36
YBX3-216ENST00000544622 LRRC71Q8N4P6 559 aa12.82□□□□□ -0.36
YBX3-216ENST00000544622 METTL13Q8N6R0 699 aa12.82□□□□□ -0.36
YBX3-216ENST00000544622 ZNF579Q8NAF0 562 aaKnown RBP12.82□□□□□ -0.36
YBX3-216ENST00000544622 SH2D3AQ9BRG2 576 aa12.82□□□□□ -0.36
YBX3-216ENST00000544622 LXNQ9BS40 222 aa12.82□□□□□ -0.36
YBX3-216ENST00000544622 FTHL17Q9BXU8 183 aa12.82□□□□□ -0.36
YBX3-216ENST00000544622 PRDM12Q9H4Q4 367 aa12.82□□□□□ -0.36
YBX3-216ENST00000544622 ERVK-5Q9HDB9 667 aa12.82□□□□□ -0.36
YBX3-216ENST00000544622 CYP26B1Q9NR63 512 aa12.82□□□□□ -0.36
YBX3-216ENST00000544622 NOC2LQ9Y3T9 749 aaKnown RBP12.82□□□□□ -0.36
YBX3-216ENST00000544622 INSL6Q9Y581 213 aa12.82□□□□□ -0.36
YBX3-216ENST00000544622 MUC3AQ02505 3323 aa12.82□□□□□ -0.36
YBX3-216ENST00000544622 DDX11L8A8MPP1 907 aa12.81□□□□□ -0.36
YBX3-216ENST00000544622 ZBTB39O15060 712 aa12.81□□□□□ -0.36
YBX3-216ENST00000544622 MARCH6O60337 910 aa12.81□□□□□ -0.36
YBX3-216ENST00000544622 DKC1O60832 514 aaKnown RBP eCLIP12.81□□□□□ -0.36
YBX3-216ENST00000544622 VTNP04004 478 aa12.81□□□□□ -0.36
YBX3-216ENST00000544622 TMOD1P28289 359 aa12.81□□□□□ -0.36
YBX3-216ENST00000544622 MCM7P33993 719 aa12.81□□□□□ -0.36
YBX3-216ENST00000544622 GPC3P51654 580 aa12.81□□□□□ -0.36
YBX3-216ENST00000544622 NPEPPSP55786 919 aa12.81□□□□□ -0.36
YBX3-216ENST00000544622 NLRP11P59045 1033 aaKnown RBP12.81□□□□□ -0.36
YBX3-216ENST00000544622 TBC1D8BQ0IIM8 1120 aa12.81□□□□□ -0.36
YBX3-216ENST00000544622 NCAPH2Q6IBW4 605 aa12.81□□□□□ -0.36
YBX3-216ENST00000544622 SPRED2Q7Z698 418 aa12.81□□□□□ -0.36
YBX3-216ENST00000544622 ZNF689Q96CS4 500 aaPredicted RBP12.81□□□□□ -0.36
YBX3-216ENST00000544622 DYDC2Q96IM9 177 aa12.81□□□□□ -0.36
YBX3-216ENST00000544622 OSMRQ99650 979 aa12.81□□□□□ -0.36
YBX3-216ENST00000544622 EIF2AK1Q9BQI3 630 aaKnown RBP12.81□□□□□ -0.36
YBX3-216ENST00000544622 TSPYL2Q9H2G4 693 aaPredicted RBP12.81□□□□□ -0.36
YBX3-216ENST00000544622 DHX33Q9H6R0 707 aaKnown RBP12.81□□□□□ -0.36
YBX3-216ENST00000544622 ZSWIM4Q9H7M6 989 aa12.81□□□□□ -0.36
YBX3-216ENST00000544622 SUGCTQ9HAC7 445 aa12.81□□□□□ -0.36
YBX3-216ENST00000544622 SEPT9Q9UHD8 586 aaPredicted RBP12.81□□□□□ -0.36
YBX3-216ENST00000544622 PPME1Q9Y570 386 aa12.81□□□□□ -0.36
YBX3-216ENST00000544622 EVPLQ92817 2033 aa12.81□□□□□ -0.36
YBX3-216ENST00000544622 COL4A6Q14031 1691 aa12.8□□□□□ -0.36
YBX3-216ENST00000544622 LINC01553A4QN01 128 aa12.8□□□□□ -0.36
YBX3-216ENST00000544622 EPOPA6NHQ4 379 aa12.8□□□□□ -0.36
YBX3-216ENST00000544622 LPXNO60711 386 aa12.8□□□□□ -0.36
YBX3-216ENST00000544622 RPS6KA5O75582 802 aa12.8□□□□□ -0.36
YBX3-216ENST00000544622 LINC00271P0C7V0 271 aa12.8□□□□□ -0.36
YBX3-216ENST00000544622 SPATA31C1P0DKV0 1188 aa12.8□□□□□ -0.36
YBX3-216ENST00000544622 FOSL2P15408 326 aa12.8□□□□□ -0.36
YBX3-216ENST00000544622 ATP2B1P20020 1258 aa12.8□□□□□ -0.36
YBX3-216ENST00000544622 EIF4BP23588 611 aaKnown RBP12.8□□□□□ -0.36
YBX3-216ENST00000544622 YWHABP31946 246 aaKnown RBP12.8□□□□□ -0.36
YBX3-216ENST00000544622 PAK2Q13177 524 aa12.8□□□□□ -0.36
YBX3-216ENST00000544622 CTTNQ14247 550 aaKnown RBP12.8□□□□□ -0.36
YBX3-216ENST00000544622 ZNF174Q15697 407 aa12.8□□□□□ -0.36
YBX3-216ENST00000544622 TMEM266Q2M3C6 531 aa12.8□□□□□ -0.36
YBX3-216ENST00000544622 MTERF2Q49AM1 385 aa12.8□□□□□ -0.36
YBX3-216ENST00000544622 TTC38Q5R3I4 469 aa12.8□□□□□ -0.36
YBX3-216ENST00000544622 FAM228AQ86W67 206 aa12.8□□□□□ -0.36
YBX3-216ENST00000544622 NEK9Q8TD19 979 aa12.8□□□□□ -0.36
YBX3-216ENST00000544622 ZBED2Q9BTP6 218 aa12.8□□□□□ -0.36
YBX3-216ENST00000544622 ST3GAL5Q9UNP4 418 aa12.8□□□□□ -0.36
YBX3-216ENST00000544622 GINS2Q9Y248 185 aa12.8□□□□□ -0.36
YBX3-216ENST00000544622 KIF3AQ9Y496 699 aa12.8□□□□□ -0.36
YBX3-216ENST00000544622 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.8□□□□□ -0.36
YBX3-216ENST00000544622 TTC3P53804 2025 aa12.79□□□□□ -0.36
YBX3-216ENST00000544622 POTEMA6NI47 508 aa12.79□□□□□ -0.36
YBX3-216ENST00000544622 GPR182O15218 404 aa12.79□□□□□ -0.36
YBX3-216ENST00000544622 MGEA5O60502 916 aa12.79□□□□□ -0.36
YBX3-216ENST00000544622 DGKIO75912 1065 aa12.79□□□□□ -0.36
YBX3-216ENST00000544622 XRCC6P12956 609 aaKnown RBP eCLIP12.79□□□□□ -0.36
YBX3-216ENST00000544622 ERVK-21P61565 698 aa12.79□□□□□ -0.36
YBX3-216ENST00000544622 FAM189BP81408 668 aa12.79□□□□□ -0.36
YBX3-216ENST00000544622 CDC42EP1Q00587 391 aa12.79□□□□□ -0.36
YBX3-216ENST00000544622 CYP4A11Q02928 519 aa12.79□□□□□ -0.36
YBX3-216ENST00000544622 NBR1Q14596 966 aa12.79□□□□□ -0.36
YBX3-216ENST00000544622 PLA2G4FQ68DD2 849 aa12.79□□□□□ -0.36
YBX3-216ENST00000544622 FAM117BQ6P1L5 589 aa12.79□□□□□ -0.36
YBX3-216ENST00000544622 CATSPER3Q86XQ3 398 aa12.79□□□□□ -0.36
YBX3-216ENST00000544622 MAP7D2Q96T17 732 aa12.79□□□□□ -0.36
YBX3-216ENST00000544622 RGS18Q9NS28 235 aa12.79□□□□□ -0.36
YBX3-216ENST00000544622 AKT3Q9Y243 479 aa12.79□□□□□ -0.36
YBX3-216ENST00000544622 PCDHB6Q9Y5E3 794 aa12.79□□□□□ -0.36
YBX3-216ENST00000544622 RFXAPO00287 272 aa12.78□□□□□ -0.36
YBX3-216ENST00000544622 UPP2O95045 317 aa12.78□□□□□ -0.36
YBX3-216ENST00000544622 OR52Z1P0C646 297 aa12.78□□□□□ -0.36
YBX3-216ENST00000544622 DARSP14868 501 aaKnown RBP12.78□□□□□ -0.36
YBX3-216ENST00000544622 TECP42680 631 aa12.78□□□□□ -0.36
YBX3-216ENST00000544622 FXR2P51116 673 aaKnown RBP eCLIP12.78□□□□□ -0.36
YBX3-216ENST00000544622 NFX1Q12986 1120 aaKnown RBP12.78□□□□□ -0.36
YBX3-216ENST00000544622 PDIA5Q14554 519 aa12.78□□□□□ -0.36
YBX3-216ENST00000544622 DSC3Q14574 896 aa12.78□□□□□ -0.36
YBX3-216ENST00000544622 ODR4Q5SWX8 454 aa12.78□□□□□ -0.36
YBX3-216ENST00000544622 OTUD6AQ7L8S5 288 aa12.78□□□□□ -0.36
YBX3-216ENST00000544622 TPH2Q8IWU9 490 aa12.78□□□□□ -0.36
YBX3-216ENST00000544622 EXOC8Q8IYI6 725 aa12.78□□□□□ -0.36
YBX3-216ENST00000544622 CEP170P1Q96L14 293 aa12.78□□□□□ -0.36
YBX3-216ENST00000544622 PPP1R16BQ96T49 567 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms