RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 EXOC1LA0A1B0GW35 172 aa13.76□□□□□ -0.21
CHD4-211ENST00000544484 MT-ND3P03897 115 aa13.76□□□□□ -0.21
CHD4-211ENST00000544484 SP8Q8IXZ3 490 aa13.76□□□□□ -0.21
CHD4-211ENST00000544484 PRPF38AQ8NAV1 312 aaKnown RBP13.76□□□□□ -0.21
CHD4-211ENST00000544484 CCDC197Q8NCU1 140 aa13.76□□□□□ -0.21
CHD4-211ENST00000544484 ATP6V1E2Q96A05 226 aa13.76□□□□□ -0.21
CHD4-211ENST00000544484 LXNQ9BS40 222 aa13.76□□□□□ -0.21
CHD4-211ENST00000544484 RNF181Q9P0P0 153 aa13.76□□□□□ -0.21
CHD4-211ENST00000544484 QARSP47897 775 aaKnown RBP13.76□□□□□ -0.21
CHD4-211ENST00000544484 IRX4P78413 519 aa13.76□□□□□ -0.21
CHD4-211ENST00000544484 ARHGEF6Q15052 776 aa13.76□□□□□ -0.21
CHD4-211ENST00000544484 PVALEFA0A1B0GWK0 134 aa13.76□□□□□ -0.21
CHD4-211ENST00000544484 HSPA6P17066 643 aa13.76□□□□□ -0.21
CHD4-211ENST00000544484 PCGF5Q86SE9 256 aa13.76□□□□□ -0.21
CHD4-211ENST00000544484 FBXO40Q9UH90 709 aa13.76□□□□□ -0.21
CHD4-211ENST00000544484 BCAP29Q9UHQ4 241 aa13.76□□□□□ -0.21
CHD4-211ENST00000544484 SART1O43290 800 aaKnown RBP13.76□□□□□ -0.21
CHD4-211ENST00000544484 KRT76Q01546 638 aa13.76□□□□□ -0.21
CHD4-211ENST00000544484 CASP8Q14790 479 aa13.76□□□□□ -0.21
CHD4-211ENST00000544484 MIPOL1Q8TD10 442 aa13.76□□□□□ -0.21
CHD4-211ENST00000544484 NEK9Q8TD19 979 aa13.76□□□□□ -0.21
CHD4-211ENST00000544484 HPS3Q969F9 1004 aa13.76□□□□□ -0.21
CHD4-211ENST00000544484 ZNF302Q9NR11 478 aa13.76□□□□□ -0.21
CHD4-211ENST00000544484 GINM1Q9NU53 330 aa13.76□□□□□ -0.21
CHD4-211ENST00000544484 G3BP2Q9UN86 482 aaKnown RBP13.76□□□□□ -0.21
CHD4-211ENST00000544484 RASGRF2O14827 1237 aa13.75□□□□□ -0.21
CHD4-211ENST00000544484 SLC12A1Q13621 1099 aa13.75□□□□□ -0.21
CHD4-211ENST00000544484 RWDD4Q6NW29 188 aaKnown RBP13.75□□□□□ -0.21
CHD4-211ENST00000544484 PPP1R2P3Q6NXS1 205 aa13.75□□□□□ -0.21
CHD4-211ENST00000544484 RHOT2Q8IXI1 618 aa13.75□□□□□ -0.21
CHD4-211ENST00000544484 TBC1D16Q8TBP0 767 aa13.75□□□□□ -0.21
CHD4-211ENST00000544484 C11orf70Q9BRQ4 267 aa13.75□□□□□ -0.21
CHD4-211ENST00000544484 MXD3Q9BW11 206 aa13.75□□□□□ -0.21
CHD4-211ENST00000544484 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.75□□□□□ -0.21
CHD4-211ENST00000544484 SNX24Q9Y343 169 aa13.75□□□□□ -0.21
CHD4-211ENST00000544484 LAMC1P11047 1609 aa13.75□□□□□ -0.21
CHD4-211ENST00000544484 ORC4O43929 436 aa13.75□□□□□ -0.21
CHD4-211ENST00000544484 P4HBP07237 508 aaKnown RBP13.75□□□□□ -0.21
CHD4-211ENST00000544484 RFX7Q2KHR2 1363 aa13.75□□□□□ -0.21
CHD4-211ENST00000544484 TRIM49P0CI25 452 aa13.75□□□□□ -0.21
CHD4-211ENST00000544484 TRIM49CP0CI26 452 aa13.75□□□□□ -0.21
CHD4-211ENST00000544484 SERPINB6P35237 376 aa13.75□□□□□ -0.21
CHD4-211ENST00000544484 RCAN1P53805 252 aa13.75□□□□□ -0.21
CHD4-211ENST00000544484 ZNF699Q32M78 642 aa13.75□□□□□ -0.21
CHD4-211ENST00000544484 C2orf69Q8N8R5 385 aa13.75□□□□□ -0.21
CHD4-211ENST00000544484 PNPLA7Q6ZV29 1317 aa13.75□□□□□ -0.21
CHD4-211ENST00000544484 SPHKAPQ2M3C7 1700 aa13.75□□□□□ -0.21
CHD4-211ENST00000544484 CASP2P42575 452 aa13.75□□□□□ -0.21
CHD4-211ENST00000544484 TWF2Q6IBS0 349 aaKnown RBP13.75□□□□□ -0.21
CHD4-211ENST00000544484 PHLDB3Q6NSJ2 640 aa13.75□□□□□ -0.21
CHD4-211ENST00000544484 FBXO38Q6PIJ6 1188 aa13.75□□□□□ -0.21
CHD4-211ENST00000544484 ANGPTL3Q9Y5C1 460 aa13.75□□□□□ -0.21
CHD4-211ENST00000544484 THOC5Q13769 683 aaKnown RBP13.75□□□□□ -0.21
CHD4-211ENST00000544484 MAP7Q14244 749 aa13.75□□□□□ -0.21
CHD4-211ENST00000544484 USP31Q70CQ4 1352 aa13.75□□□□□ -0.21
CHD4-211ENST00000544484 SCYL3Q8IZE3 742 aa13.75□□□□□ -0.21
CHD4-211ENST00000544484 PROM2Q8N271 834 aa13.75□□□□□ -0.21
CHD4-211ENST00000544484 EIF2AK1Q9BQI3 630 aaKnown RBP13.75□□□□□ -0.21
CHD4-211ENST00000544484 SCAF8Q9UPN6 1271 aaKnown RBP13.75□□□□□ -0.21
CHD4-211ENST00000544484 TOM1L1O75674 476 aa13.74□□□□□ -0.21
CHD4-211ENST00000544484 PPP1R18Q6NYC8 613 aa13.74□□□□□ -0.21
CHD4-211ENST00000544484 MTRQ99707 1265 aa13.74□□□□□ -0.21
CHD4-211ENST00000544484 RGL1Q9NZL6 768 aa13.74□□□□□ -0.21
CHD4-211ENST00000544484 ZNF609O15014 1411 aa13.74□□□□□ -0.21
CHD4-211ENST00000544484 HMGCS2P54868 508 aa13.74□□□□□ -0.21
CHD4-211ENST00000544484 EXOSC10Q01780 885 aaKnown RBP13.74□□□□□ -0.21
CHD4-211ENST00000544484 ZNF211Q13398 564 aaPredicted RBP13.74□□□□□ -0.21
CHD4-211ENST00000544484 DBN1Q16643 649 aa13.74□□□□□ -0.21
CHD4-211ENST00000544484 PSPC1Q8WXF1 523 aaKnown RBP13.74□□□□□ -0.21
CHD4-211ENST00000544484 MTA3Q9BTC8 594 aa13.74□□□□□ -0.21
CHD4-211ENST00000544484 ZMYND12Q9H0C1 365 aa13.74□□□□□ -0.21
CHD4-211ENST00000544484 TLK1Q9UKI8 766 aa13.74□□□□□ -0.21
CHD4-211ENST00000544484 A0A0G2JLW4 131 aa13.74□□□□□ -0.21
CHD4-211ENST00000544484 TTC26A0AVF1 554 aa13.74□□□□□ -0.21
CHD4-211ENST00000544484 WDR46O15213 610 aaKnown RBP13.74□□□□□ -0.21
CHD4-211ENST00000544484 ANXA13P27216 316 aa13.74□□□□□ -0.21
CHD4-211ENST00000544484 MICAL1Q8TDZ2 1067 aa13.74□□□□□ -0.21
CHD4-211ENST00000544484 PYROXD1Q8WU10 500 aa13.74□□□□□ -0.21
CHD4-211ENST00000544484 CACYBPQ9HB71 228 aaKnown RBP13.74□□□□□ -0.21
CHD4-211ENST00000544484 DAGLAQ9Y4D2 1042 aa13.74□□□□□ -0.21
CHD4-211ENST00000544484 QRICH2Q9H0J4 1663 aa13.74□□□□□ -0.21
CHD4-211ENST00000544484 NCK2O43639 380 aa13.74□□□□□ -0.21
CHD4-211ENST00000544484 SSTR3P32745 418 aaPredicted RBP13.74□□□□□ -0.21
CHD4-211ENST00000544484 VAMP7P51809 220 aa13.74□□□□□ -0.21
CHD4-211ENST00000544484 LDHDQ86WU2 507 aa13.74□□□□□ -0.21
CHD4-211ENST00000544484 SCINQ9Y6U3 715 aa13.74□□□□□ -0.21
CHD4-211ENST00000544484 SLMAPQ14BN4 828 aa13.74□□□□□ -0.21
CHD4-211ENST00000544484 MARCH10Q8NA82 808 aaPredicted RBP13.74□□□□□ -0.21
CHD4-211ENST00000544484 ABCF3Q9NUQ8 709 aa13.74□□□□□ -0.21
CHD4-211ENST00000544484 PLEKHG2Q9H7P9 1386 aa13.74□□□□□ -0.21
CHD4-211ENST00000544484 NPHP3-ACAD11A0A0J9YXS1 232 aa13.74□□□□□ -0.21
CHD4-211ENST00000544484 TTC36A6NLP5 189 aa13.74□□□□□ -0.21
CHD4-211ENST00000544484 ATP2C1P98194 919 aaPredicted RBP13.74□□□□□ -0.21
CHD4-211ENST00000544484 MAP3K21Q5TCX8 1036 aa13.74□□□□□ -0.21
CHD4-211ENST00000544484 UBN1Q9NPG3 1134 aa13.74□□□□□ -0.21
CHD4-211ENST00000544484 PDIK1LQ8N165 341 aa13.73□□□□□ -0.21
CHD4-211ENST00000544484 TMEM35BQ8NCS4 154 aa13.73□□□□□ -0.21
CHD4-211ENST00000544484 FAM167AQ96KS9 214 aa13.73□□□□□ -0.21
CHD4-211ENST00000544484 RPAP3Q9H6T3 665 aaPredicted RBP13.73□□□□□ -0.21
CHD4-211ENST00000544484 ZBTB12Q9Y330 459 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms