RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 TBC1D8BQ0IIM8 1120 aa17.33■□□□□ 0.36
ECHDC2-223ENST00000542552 CUL4AQ13619 759 aa17.33■□□□□ 0.36
ECHDC2-223ENST00000542552 KIZQ2M2Z5 673 aa17.33■□□□□ 0.36
ECHDC2-223ENST00000542552 MTERF2Q49AM1 385 aa17.33■□□□□ 0.36
ECHDC2-223ENST00000542552 RTN4RL1Q86UN2 441 aaPredicted RBP17.33■□□□□ 0.36
ECHDC2-223ENST00000542552 MYOCDQ8IZQ8 938 aa17.33■□□□□ 0.36
ECHDC2-223ENST00000542552 LRRC71Q8N4P6 559 aa17.33■□□□□ 0.36
ECHDC2-223ENST00000542552 TMEM40Q8WWA1 233 aa17.33■□□□□ 0.36
ECHDC2-223ENST00000542552 LINC01599Q8WXQ3 324 aa17.33■□□□□ 0.36
ECHDC2-223ENST00000542552 DYDC2Q96IM9 177 aa17.33■□□□□ 0.36
ECHDC2-223ENST00000542552 LXNQ9BS40 222 aa17.33■□□□□ 0.36
ECHDC2-223ENST00000542552 ZBED2Q9BTP6 218 aa17.33■□□□□ 0.36
ECHDC2-223ENST00000542552 ADAMTS10Q9H324 1103 aa17.33■□□□□ 0.36
ECHDC2-223ENST00000542552 RGL1Q9NZL6 768 aa17.33■□□□□ 0.36
ECHDC2-223ENST00000542552 COL4A6Q14031 1691 aa17.32■□□□□ 0.36
ECHDC2-223ENST00000542552 MAFO75444 373 aaPredicted RBP17.32■□□□□ 0.36
ECHDC2-223ENST00000542552 PAK2Q13177 524 aa17.32■□□□□ 0.36
ECHDC2-223ENST00000542552 GNL2Q13823 731 aaKnown RBP17.32■□□□□ 0.36
ECHDC2-223ENST00000542552 ZNF174Q15697 407 aa17.32■□□□□ 0.36
ECHDC2-223ENST00000542552 TTC38Q5R3I4 469 aa17.32■□□□□ 0.36
ECHDC2-223ENST00000542552 FAM117BQ6P1L5 589 aa17.32■□□□□ 0.36
ECHDC2-223ENST00000542552 CRIPAKQ8N1N5 446 aa17.32■□□□□ 0.36
ECHDC2-223ENST00000542552 C4orf32Q8N8J7 132 aa17.32■□□□□ 0.36
ECHDC2-223ENST00000542552 SP7Q8TDD2 431 aaPredicted RBP17.32■□□□□ 0.36
ECHDC2-223ENST00000542552 EIF2AK1Q9BQI3 630 aaKnown RBP17.32■□□□□ 0.36
ECHDC2-223ENST00000542552 SH2D3AQ9BRG2 576 aa17.32■□□□□ 0.36
ECHDC2-223ENST00000542552 FTHL17Q9BXU8 183 aa17.32■□□□□ 0.36
ECHDC2-223ENST00000542552 TMX1Q9H3N1 280 aa17.32■□□□□ 0.36
ECHDC2-223ENST00000542552 PRDM12Q9H4Q4 367 aa17.32■□□□□ 0.36
ECHDC2-223ENST00000542552 ZSWIM4Q9H7M6 989 aa17.32■□□□□ 0.36
ECHDC2-223ENST00000542552 SUGCTQ9HAC7 445 aa17.32■□□□□ 0.36
ECHDC2-223ENST00000542552 ERVK-5Q9HDB9 667 aa17.32■□□□□ 0.36
ECHDC2-223ENST00000542552 NOC2LQ9Y3T9 749 aaKnown RBP17.32■□□□□ 0.36
ECHDC2-223ENST00000542552 PPME1Q9Y570 386 aa17.32■□□□□ 0.36
ECHDC2-223ENST00000542552 INSL6Q9Y581 213 aa17.32■□□□□ 0.36
ECHDC2-223ENST00000542552 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.32■□□□□ 0.36
ECHDC2-223ENST00000542552 ARID2Q68CP9 1835 aa17.31■□□□□ 0.36
ECHDC2-223ENST00000542552 LYPLA2O95372 231 aa17.31■□□□□ 0.36
ECHDC2-223ENST00000542552 NPEPPSP55786 919 aa17.31■□□□□ 0.36
ECHDC2-223ENST00000542552 NLRP11P59045 1033 aaKnown RBP17.31■□□□□ 0.36
ECHDC2-223ENST00000542552 DRP2Q13474 957 aa17.31■□□□□ 0.36
ECHDC2-223ENST00000542552 PLA2G4FQ68DD2 849 aa17.31■□□□□ 0.36
ECHDC2-223ENST00000542552 ZNF579Q8NAF0 562 aaKnown RBP17.31■□□□□ 0.36
ECHDC2-223ENST00000542552 NEK9Q8TD19 979 aa17.31■□□□□ 0.36
ECHDC2-223ENST00000542552 MAP7D2Q96T17 732 aa17.31■□□□□ 0.36
ECHDC2-223ENST00000542552 OSMRQ99650 979 aa17.31■□□□□ 0.36
ECHDC2-223ENST00000542552 TSPYL2Q9H2G4 693 aaPredicted RBP17.31■□□□□ 0.36
ECHDC2-223ENST00000542552 CYP26B1Q9NR63 512 aa17.31■□□□□ 0.36
ECHDC2-223ENST00000542552 NOL7Q9UMY1 257 aaKnown RBP17.31■□□□□ 0.36
ECHDC2-223ENST00000542552 SMC3Q9UQE7 1217 aa17.31■□□□□ 0.36
ECHDC2-223ENST00000542552 AKT3Q9Y243 479 aa17.31■□□□□ 0.36
ECHDC2-223ENST00000542552 GINS2Q9Y248 185 aa17.31■□□□□ 0.36
ECHDC2-223ENST00000542552 LINC01553A4QN01 128 aa17.3■□□□□ 0.36
ECHDC2-223ENST00000542552 RPS6KA5O75582 802 aa17.3■□□□□ 0.36
ECHDC2-223ENST00000542552 FOSL2P15408 326 aa17.3■□□□□ 0.36
ECHDC2-223ENST00000542552 YWHABP31946 246 aaKnown RBP17.3■□□□□ 0.36
ECHDC2-223ENST00000542552 GPC3P51654 580 aa17.3■□□□□ 0.36
ECHDC2-223ENST00000542552 CYP4A11Q02928 519 aa17.3■□□□□ 0.36
ECHDC2-223ENST00000542552 ADGRE1Q14246 886 aa17.3■□□□□ 0.36
ECHDC2-223ENST00000542552 CTTNQ14247 550 aaKnown RBP17.3■□□□□ 0.36
ECHDC2-223ENST00000542552 TMEM266Q2M3C6 531 aa17.3■□□□□ 0.36
ECHDC2-223ENST00000542552 DHX33Q9H6R0 707 aaKnown RBP17.3■□□□□ 0.36
ECHDC2-223ENST00000542552 ST3GAL5Q9UNP4 418 aa17.3■□□□□ 0.36
ECHDC2-223ENST00000542552 SPTBN5Q9NRC6 3674 aaKnown RBP17.3■□□□□ 0.36
ECHDC2-223ENST00000542552 ZBTB39O15060 712 aa17.29■□□□□ 0.36
ECHDC2-223ENST00000542552 OR52Z1P0C646 297 aa17.29■□□□□ 0.36
ECHDC2-223ENST00000542552 EIF4BP23588 611 aaKnown RBP17.29■□□□□ 0.36
ECHDC2-223ENST00000542552 CDC42EP1Q00587 391 aa17.29■□□□□ 0.36
ECHDC2-223ENST00000542552 NBR1Q14596 966 aa17.29■□□□□ 0.36
ECHDC2-223ENST00000542552 OTUD6AQ7L8S5 288 aa17.29■□□□□ 0.36
ECHDC2-223ENST00000542552 SPRED2Q7Z698 418 aa17.29■□□□□ 0.36
ECHDC2-223ENST00000542552 FAM228AQ86W67 206 aa17.29■□□□□ 0.36
ECHDC2-223ENST00000542552 TPH2Q8IWU9 490 aa17.29■□□□□ 0.36
ECHDC2-223ENST00000542552 CEP170P1Q96L14 293 aa17.29■□□□□ 0.36
ECHDC2-223ENST00000542552 PPP1R16BQ96T49 567 aa17.29■□□□□ 0.36
ECHDC2-223ENST00000542552 JPH2Q9BR39 696 aaPredicted RBP17.29■□□□□ 0.36
ECHDC2-223ENST00000542552 RC3H2Q9HBD1 1191 aaKnown RBP17.29■□□□□ 0.36
ECHDC2-223ENST00000542552 EPOPA6NHQ4 379 aa17.28■□□□□ 0.36
ECHDC2-223ENST00000542552 POTEMA6NI47 508 aa17.28■□□□□ 0.36
ECHDC2-223ENST00000542552 GPR182O15218 404 aa17.28■□□□□ 0.36
ECHDC2-223ENST00000542552 MGEA5O60502 916 aa17.28■□□□□ 0.36
ECHDC2-223ENST00000542552 UPP2O95045 317 aa17.28■□□□□ 0.36
ECHDC2-223ENST00000542552 SPATA31C1P0DKV0 1188 aa17.28■□□□□ 0.36
ECHDC2-223ENST00000542552 RFC5P40937 340 aa17.28■□□□□ 0.36
ECHDC2-223ENST00000542552 DNM2P50570 870 aa17.28■□□□□ 0.36
ECHDC2-223ENST00000542552 ERVK-21P61565 698 aa17.28■□□□□ 0.36
ECHDC2-223ENST00000542552 NFX1Q12986 1120 aaKnown RBP17.28■□□□□ 0.36
ECHDC2-223ENST00000542552 ODR4Q5SWX8 454 aa17.28■□□□□ 0.36
ECHDC2-223ENST00000542552 EXOC8Q8IYI6 725 aa17.28■□□□□ 0.36
ECHDC2-223ENST00000542552 ANKEF1Q9NU02 776 aa17.28■□□□□ 0.36
ECHDC2-223ENST00000542552 SUCLA2Q9P2R7 463 aaPredicted RBP17.28■□□□□ 0.36
ECHDC2-223ENST00000542552 PCDHB6Q9Y5E3 794 aa17.28■□□□□ 0.36
ECHDC2-223ENST00000542552 H3BQV1 296 aa17.27■□□□□ 0.36
ECHDC2-223ENST00000542552 XRCC6P12956 609 aaKnown RBP eCLIP17.27■□□□□ 0.36
ECHDC2-223ENST00000542552 DARSP14868 501 aaKnown RBP17.27■□□□□ 0.36
ECHDC2-223ENST00000542552 POU3F3P20264 500 aaPredicted RBP17.27■□□□□ 0.36
ECHDC2-223ENST00000542552 TECP42680 631 aa17.27■□□□□ 0.36
ECHDC2-223ENST00000542552 FXR2P51116 673 aaKnown RBP eCLIP17.27■□□□□ 0.36
ECHDC2-223ENST00000542552 PTGDRQ13258 359 aa17.27■□□□□ 0.36
ECHDC2-223ENST00000542552 DSC3Q14574 896 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms