RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 DBHP09172 617 aa10.72□□□□□ -0.69
MRPS35-204ENST00000542199 GNAT1P11488 350 aa10.72□□□□□ -0.69
MRPS35-204ENST00000542199 POU3F2P20265 443 aaPredicted RBP10.72□□□□□ -0.69
MRPS35-204ENST00000542199 SKOR2Q2VWA4 1001 aaPredicted RBP10.72□□□□□ -0.69
MRPS35-204ENST00000542199 ADGRF1Q5T601 910 aa10.72□□□□□ -0.69
MRPS35-204ENST00000542199 MROH9Q5TGP6 573 aa10.72□□□□□ -0.69
MRPS35-204ENST00000542199 NBPF11Q86T75 865 aa10.72□□□□□ -0.69
MRPS35-204ENST00000542199 PIP4K2CQ8TBX8 421 aa10.72□□□□□ -0.69
MRPS35-204ENST00000542199 CHAC2Q8WUX2 184 aa10.72□□□□□ -0.69
MRPS35-204ENST00000542199 PIGBQ92521 554 aa10.72□□□□□ -0.69
MRPS35-204ENST00000542199 CATSPERZQ9NTU4 200 aa10.72□□□□□ -0.69
MRPS35-204ENST00000542199 B4E1Z4 1266 aa10.71□□□□□ -0.69
MRPS35-204ENST00000542199 M0R2C6 588 aa10.71□□□□□ -0.69
MRPS35-204ENST00000542199 NKRFO15226 690 aaKnown RBP eCLIP10.71□□□□□ -0.69
MRPS35-204ENST00000542199 APPP05067 770 aa10.71□□□□□ -0.69
MRPS35-204ENST00000542199 ARL4AP40617 200 aa10.71□□□□□ -0.69
MRPS35-204ENST00000542199 ST5P78524 1137 aa10.71□□□□□ -0.69
MRPS35-204ENST00000542199 QSER1Q2KHR3 1735 aa10.71□□□□□ -0.69
MRPS35-204ENST00000542199 KIF7Q2M1P5 1343 aa10.71□□□□□ -0.69
MRPS35-204ENST00000542199 TMEM177Q53S58 311 aa10.71□□□□□ -0.69
MRPS35-204ENST00000542199 C16orf59Q7L2K0 433 aa10.71□□□□□ -0.69
MRPS35-204ENST00000542199 KRT26Q7Z3Y9 468 aa10.71□□□□□ -0.69
MRPS35-204ENST00000542199 DDX53Q86TM3 631 aaKnown RBP10.71□□□□□ -0.69
MRPS35-204ENST00000542199 PPM1KQ8N3J5 372 aa10.71□□□□□ -0.69
MRPS35-204ENST00000542199 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.71□□□□□ -0.69
MRPS35-204ENST00000542199 LEO1Q8WVC0 666 aaPredicted RBP10.71□□□□□ -0.69
MRPS35-204ENST00000542199 INTS4Q96HW7 963 aaKnown RBP10.71□□□□□ -0.69
MRPS35-204ENST00000542199 MAPRE3Q9UPY8 281 aa10.71□□□□□ -0.69
MRPS35-204ENST00000542199 MAP2P11137 1827 aaKnown RBP10.7□□□□□ -0.7
MRPS35-204ENST00000542199 TOGARAM1Q9Y4F4 1720 aa10.7□□□□□ -0.7
MRPS35-204ENST00000542199 NUDT19A8MXV4 375 aa10.7□□□□□ -0.7
MRPS35-204ENST00000542199 DGKIO75912 1065 aa10.7□□□□□ -0.7
MRPS35-204ENST00000542199 PHKG2P15735 406 aa10.7□□□□□ -0.7
MRPS35-204ENST00000542199 HMGB2P26583 209 aaKnown RBP10.7□□□□□ -0.7
MRPS35-204ENST00000542199 CNGA1P29973 690 aa10.7□□□□□ -0.7
MRPS35-204ENST00000542199 FLT3P36888 993 aa10.7□□□□□ -0.7
MRPS35-204ENST00000542199 PTPROQ16827 1216 aa10.7□□□□□ -0.7
MRPS35-204ENST00000542199 FAM47CQ5HY64 1035 aa10.7□□□□□ -0.7
MRPS35-204ENST00000542199 OTOP3Q7RTS5 596 aa10.7□□□□□ -0.7
MRPS35-204ENST00000542199 OVCH1Q7RTY7 1134 aa10.7□□□□□ -0.7
MRPS35-204ENST00000542199 CABP7Q86V35 215 aa10.7□□□□□ -0.7
MRPS35-204ENST00000542199 MORC1Q86VD1 984 aa10.7□□□□□ -0.7
MRPS35-204ENST00000542199 IFNL2Q8IZJ0 200 aa10.7□□□□□ -0.7
MRPS35-204ENST00000542199 CAAP1Q9H8G2 361 aa10.7□□□□□ -0.7
MRPS35-204ENST00000542199 KNSTRNQ9Y448 316 aa10.7□□□□□ -0.7
MRPS35-204ENST00000542199 COL4A3BPQ9Y5P4 624 aa10.7□□□□□ -0.7
MRPS35-204ENST00000542199 HCFC2Q9Y5Z7 792 aa10.7□□□□□ -0.7
MRPS35-204ENST00000542199 TCRBV5S4A2TA0A5A2 114 aa10.69□□□□□ -0.7
MRPS35-204ENST00000542199 ZC3H12DA2A288 527 aaKnown RBP10.69□□□□□ -0.7
MRPS35-204ENST00000542199 SRGAP3O43295 1099 aa10.69□□□□□ -0.7
MRPS35-204ENST00000542199 PDE6AP16499 860 aa10.69□□□□□ -0.7
MRPS35-204ENST00000542199 YY1P25490 414 aa10.69□□□□□ -0.7
MRPS35-204ENST00000542199 POLD1P28340 1107 aa10.69□□□□□ -0.7
MRPS35-204ENST00000542199 ERVFRD-1P60508 538 aa10.69□□□□□ -0.7
MRPS35-204ENST00000542199 HABP4Q5JVS0 413 aaKnown RBP10.69□□□□□ -0.7
MRPS35-204ENST00000542199 UBE2R2Q712K3 238 aaPredicted RBP10.69□□□□□ -0.7
MRPS35-204ENST00000542199 ZSWIM9Q86XI8 627 aa10.69□□□□□ -0.7
MRPS35-204ENST00000542199 COL23A1Q86Y22 540 aaPredicted RBP10.69□□□□□ -0.7
MRPS35-204ENST00000542199 WNK4Q96J92 1243 aa10.69□□□□□ -0.7
MRPS35-204ENST00000542199 CEP350Q5VT06 3117 aa10.68□□□□□ -0.7
MRPS35-204ENST00000542199 COL24A1Q17RW2 1714 aa10.68□□□□□ -0.7
MRPS35-204ENST00000542199 CBX4O00257 560 aa10.68□□□□□ -0.7
MRPS35-204ENST00000542199 KCNK3O14649 394 aa10.68□□□□□ -0.7
MRPS35-204ENST00000542199 AMY2AP04746 511 aa10.68□□□□□ -0.7
MRPS35-204ENST00000542199 KRT15P19012 456 aa10.68□□□□□ -0.7
MRPS35-204ENST00000542199 AMY2BP19961 511 aa10.68□□□□□ -0.7
MRPS35-204ENST00000542199 POU3F3P20264 500 aaPredicted RBP10.68□□□□□ -0.7
MRPS35-204ENST00000542199 AMPD3Q01432 767 aa10.68□□□□□ -0.7
MRPS35-204ENST00000542199 KCNMB1Q16558 191 aa10.68□□□□□ -0.7
MRPS35-204ENST00000542199 STRA8Q7Z7C7 330 aa10.68□□□□□ -0.7
MRPS35-204ENST00000542199 OSTM1Q86WC4 334 aa10.68□□□□□ -0.7
MRPS35-204ENST00000542199 NETO2Q8NC67 525 aa10.68□□□□□ -0.7
MRPS35-204ENST00000542199 TMOD3Q9NYL9 352 aa10.68□□□□□ -0.7
MRPS35-204ENST00000542199 TUBGCP6Q96RT7 1819 aa10.68□□□□□ -0.7
MRPS35-204ENST00000542199 KDRP35968 1356 aa10.67□□□□□ -0.7
MRPS35-204ENST00000542199 ZNF891A8MT65 544 aaPredicted RBP10.67□□□□□ -0.7
MRPS35-204ENST00000542199 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.67□□□□□ -0.7
MRPS35-204ENST00000542199 TRAF5O00463 557 aa10.67□□□□□ -0.7
MRPS35-204ENST00000542199 GLI1P08151 1106 aa10.67□□□□□ -0.7
MRPS35-204ENST00000542199 NCLP19338 710 aaKnown RBP10.67□□□□□ -0.7
MRPS35-204ENST00000542199 SOX5P35711 763 aa10.67□□□□□ -0.7
MRPS35-204ENST00000542199 JAM2P57087 298 aa10.67□□□□□ -0.7
MRPS35-204ENST00000542199 STEAP3Q658P3 488 aa10.67□□□□□ -0.7
MRPS35-204ENST00000542199 FSTL4Q6MZW2 842 aa10.67□□□□□ -0.7
MRPS35-204ENST00000542199 RPTNQ6XPR3 784 aa10.67□□□□□ -0.7
MRPS35-204ENST00000542199 SH3RF2Q8TEC5 729 aa10.67□□□□□ -0.7
MRPS35-204ENST00000542199 SMURF1Q9HCE7 757 aa10.67□□□□□ -0.7
MRPS35-204ENST00000542199 PCDH12Q9NPG4 1184 aa10.67□□□□□ -0.7
MRPS35-204ENST00000542199 ASAP1Q9ULH1 1129 aa10.67□□□□□ -0.7
MRPS35-204ENST00000542199 ERVV-2B6SEH9 535 aa10.66□□□□□ -0.7
MRPS35-204ENST00000542199 ZNF561-AS1K7EIQ3 104 aa10.66□□□□□ -0.7
MRPS35-204ENST00000542199 SGSM2O43147 1006 aa10.66□□□□□ -0.7
MRPS35-204ENST00000542199 CYBBP04839 570 aa10.66□□□□□ -0.7
MRPS35-204ENST00000542199 ITGB5P18084 799 aa10.66□□□□□ -0.7
MRPS35-204ENST00000542199 IL13P35225 146 aa10.66□□□□□ -0.7
MRPS35-204ENST00000542199 PDE6BP35913 854 aa10.66□□□□□ -0.7
MRPS35-204ENST00000542199 MECP2P51608 486 aaKnown RBP10.66□□□□□ -0.7
MRPS35-204ENST00000542199 RBM10P98175 930 aaKnown RBP10.66□□□□□ -0.7
MRPS35-204ENST00000542199 SPIRE1Q08AE8 756 aa10.66□□□□□ -0.7
MRPS35-204ENST00000542199 RAB3GAP1Q15042 981 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms