RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 ATP8B1O43520 1251 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 SMARCA1P28370 1054 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 POLE2P56282 527 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 DAB2P98082 770 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 MORF4L2Q15014 288 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 COA7Q96BR5 231 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 PALD1Q9ULE6 856 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 NNTQ13423 1086 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 TFDP2Q14188 446 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 LLGL1Q15334 1064 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 THEMIS2Q5TEJ8 643 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 TTC17Q96AE7 1141 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 SAYSD1Q9NPB0 183 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 DNAJC17Q9NVM6 304 aaKnown RBP11.48□□□□□ -0.57
GABRB3-204ENST00000541819 TMEM63CQ9P1W3 806 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 NOVA2Q9UNW9 492 aaKnown RBP11.48□□□□□ -0.57
GABRB3-204ENST00000541819 MTMR6Q9Y217 621 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 LOC102724428A0A0B4J2F2 783 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 EIF2AK2P19525 551 aaKnown RBP11.47□□□□□ -0.57
GABRB3-204ENST00000541819 SIK1P57059 783 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 SKOR1P84550 965 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 EFTUD2Q15029 972 aaKnown RBP eCLIP11.47□□□□□ -0.57
GABRB3-204ENST00000541819 TWF2Q6IBS0 349 aaKnown RBP11.47□□□□□ -0.57
GABRB3-204ENST00000541819 FAM196AQ6ZSG2 479 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 CYTH2Q99418 400 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 CYP26B1Q9NR63 512 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 SENP1Q9P0U3 644 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 AFF4Q9UHB7 1163 aaKnown RBP11.47□□□□□ -0.57
GABRB3-204ENST00000541819 CFAP69A5D8W1 941 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 DNAJC6O75061 913 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 RAD17O75943 681 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 GSPT1P15170 499 aaKnown RBP11.47□□□□□ -0.57
GABRB3-204ENST00000541819 RXRBP28702 533 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 SLC39A14Q15043 492 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 ALS2CLQ60I27 953 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 RTKN2Q8IZC4 609 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 EEF2KMTQ96G04 330 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 CALR3Q96L12 384 aaKnown RBP11.47□□□□□ -0.57
GABRB3-204ENST00000541819 TMEM60Q9H2L4 133 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 NDFIP2Q9NV92 336 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 ZNF197O14709 1029 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 TADA3O75528 432 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 EIF4A3P38919 411 aaKnown RBP11.47□□□□□ -0.57
GABRB3-204ENST00000541819 GPC3P51654 580 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 MAP3K10Q02779 954 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 CTTNQ14247 550 aaKnown RBP11.47□□□□□ -0.57
GABRB3-204ENST00000541819 SPARCL1Q14515 664 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 KRT72Q14CN4 511 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 CARD14Q9BXL6 1004 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 STRIP2Q9ULQ0 834 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 USP17L3A6NCW0 530 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 USP17L4A6NCW7 530 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 ARL4DP49703 201 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 HDAC4P56524 1084 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 DYNLL1P63167 89 aaKnown RBP11.47□□□□□ -0.57
GABRB3-204ENST00000541819 CUL1Q13616 776 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 MIGA2Q7L4E1 593 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 TAS2R42Q7RTR8 314 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 USP17L1Q7RTZ2 530 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 THNSL1Q8IYQ7 743 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 TSSK1BQ9BXA7 367 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 CARMIL3Q8ND23 1372 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 SLFN14P0C7P3 912 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 STXBP2Q15833 593 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 UBE2SQ16763 222 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 ZNF699Q32M78 642 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 SLC27A3Q5K4L6 730 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 KIAA1586Q9HCI6 787 aa11.47□□□□□ -0.57
GABRB3-204ENST00000541819 PPARGC1AQ9UBK2 798 aaKnown RBP11.47□□□□□ -0.57
GABRB3-204ENST00000541819 PNMA6FA0A0J9YX94 578 aa11.46□□□□□ -0.57
GABRB3-204ENST00000541819 KLHL38Q2WGJ6 581 aa11.46□□□□□ -0.57
GABRB3-204ENST00000541819 CC2D1AQ6P1N0 951 aaPredicted RBP11.46□□□□□ -0.57
GABRB3-204ENST00000541819 DDX50Q9BQ39 737 aaKnown RBP11.46□□□□□ -0.57
GABRB3-204ENST00000541819 FBXO40Q9UH90 709 aa11.46□□□□□ -0.57
GABRB3-204ENST00000541819 MAN1B1Q9UKM7 699 aa11.46□□□□□ -0.57
GABRB3-204ENST00000541819 CTIFO43310 598 aaKnown RBP11.46□□□□□ -0.57
GABRB3-204ENST00000541819 ARIH2O95376 493 aa11.46□□□□□ -0.57
GABRB3-204ENST00000541819 CALB1P05937 261 aa11.46□□□□□ -0.57
GABRB3-204ENST00000541819 GTF2H3Q13889 308 aa11.46□□□□□ -0.57
GABRB3-204ENST00000541819 ITPRIPL1Q6GPH6 555 aa11.46□□□□□ -0.57
GABRB3-204ENST00000541819 TEX2Q8IWB9 1127 aa11.46□□□□□ -0.57
GABRB3-204ENST00000541819 PHF21AQ96BD5 680 aa11.46□□□□□ -0.57
GABRB3-204ENST00000541819 KIF2CQ99661 725 aa11.46□□□□□ -0.57
GABRB3-204ENST00000541819 YIPF2Q9BWQ6 316 aa11.46□□□□□ -0.57
GABRB3-204ENST00000541819 ZNF341Q9BYN7 854 aa11.46□□□□□ -0.57
GABRB3-204ENST00000541819 CCDC90BQ9GZT6 254 aa11.46□□□□□ -0.57
GABRB3-204ENST00000541819 VPS11Q9H270 941 aa11.46□□□□□ -0.57
GABRB3-204ENST00000541819 STAP1Q9ULZ2 295 aa11.46□□□□□ -0.57
GABRB3-204ENST00000541819 PCDHGB4Q9UN71 923 aa11.46□□□□□ -0.57
GABRB3-204ENST00000541819 BIVM-ERCC5R4GMW8 1640 aa11.46□□□□□ -0.57
GABRB3-204ENST00000541819 KRT87PA6NCN2 255 aa11.46□□□□□ -0.58
GABRB3-204ENST00000541819 GOLGA8MH3BSY2 632 aa11.46□□□□□ -0.58
GABRB3-204ENST00000541819 HSPA1AP0DMV8 641 aaKnown RBP11.46□□□□□ -0.58
GABRB3-204ENST00000541819 HSPA1BP0DMV9 641 aaKnown RBP11.46□□□□□ -0.58
GABRB3-204ENST00000541819 CXCR5P32302 372 aa11.46□□□□□ -0.58
GABRB3-204ENST00000541819 PEX3P56589 373 aa11.46□□□□□ -0.58
GABRB3-204ENST00000541819 SLC9A5Q14940 896 aa11.46□□□□□ -0.58
GABRB3-204ENST00000541819 HIPK4Q8NE63 616 aa11.46□□□□□ -0.58
GABRB3-204ENST00000541819 SSH3Q8TE77 659 aa11.46□□□□□ -0.58
GABRB3-204ENST00000541819 TRIM62Q9BVG3 475 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms