RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 C9IYK1 514 aa11.27□□□□□ -0.61
CHFR-220ENST00000541817 M0QZ92 97 aa11.27□□□□□ -0.61
CHFR-220ENST00000541817 ZFYP08048 801 aaPredicted RBP11.27□□□□□ -0.61
CHFR-220ENST00000541817 PMLP29590 882 aa11.27□□□□□ -0.61
CHFR-220ENST00000541817 PTPN14Q15678 1187 aa11.27□□□□□ -0.61
CHFR-220ENST00000541817 GPATCH4Q5T3I0 446 aaKnown RBP11.27□□□□□ -0.61
CHFR-220ENST00000541817 DCLRE1AQ6PJP8 1040 aa11.27□□□□□ -0.61
CHFR-220ENST00000541817 CASD1Q96PB1 797 aa11.27□□□□□ -0.61
CHFR-220ENST00000541817 JMJD4Q9H9V9 463 aa11.27□□□□□ -0.61
CHFR-220ENST00000541817 ATP6V0A4Q9HBG4 840 aa11.27□□□□□ -0.61
CHFR-220ENST00000541817 RGS18Q9NS28 235 aa11.27□□□□□ -0.61
CHFR-220ENST00000541817 RNF19AQ9NV58 838 aa11.27□□□□□ -0.61
CHFR-220ENST00000541817 DZANK1Q9NVP4 752 aa11.27□□□□□ -0.61
CHFR-220ENST00000541817 ASPMQ8IZT6 3477 aa11.26□□□□□ -0.61
CHFR-220ENST00000541817 SOBPA7XYQ1 873 aa11.26□□□□□ -0.61
CHFR-220ENST00000541817 SPATA31C2B4DYI2 1134 aa11.26□□□□□ -0.61
CHFR-220ENST00000541817 PPP1R11O60927 126 aaPredicted RBP11.26□□□□□ -0.61
CHFR-220ENST00000541817 SRFP11831 508 aa11.26□□□□□ -0.61
CHFR-220ENST00000541817 INSRRP14616 1297 aa11.26□□□□□ -0.61
CHFR-220ENST00000541817 HAND2P61296 217 aa11.26□□□□□ -0.61
CHFR-220ENST00000541817 NEDD9Q14511 834 aa11.26□□□□□ -0.61
CHFR-220ENST00000541817 LETM2Q2VYF4 491 aa11.26□□□□□ -0.61
CHFR-220ENST00000541817 SLC39A11Q8N1S5 342 aa11.26□□□□□ -0.61
CHFR-220ENST00000541817 NETO1Q8TDF5 533 aa11.26□□□□□ -0.61
CHFR-220ENST00000541817 MYADMQ96S97 322 aa11.26□□□□□ -0.61
CHFR-220ENST00000541817 EPC1Q9H2F5 836 aa11.26□□□□□ -0.61
CHFR-220ENST00000541817 ECHDC1Q9NTX5 307 aa11.26□□□□□ -0.61
CHFR-220ENST00000541817 TCP11L1Q9NUJ3 509 aa11.26□□□□□ -0.61
CHFR-220ENST00000541817 GMEB2Q9UKD1 530 aa11.26□□□□□ -0.61
CHFR-220ENST00000541817 SETXQ7Z333 2677 aaKnown RBP11.25□□□□□ -0.61
CHFR-220ENST00000541817 GSTTP1A0A1W2PQM5 241 aa11.25□□□□□ -0.61
CHFR-220ENST00000541817 RPS6KA5O75582 802 aa11.25□□□□□ -0.61
CHFR-220ENST00000541817 CD72P21854 359 aa11.25□□□□□ -0.61
CHFR-220ENST00000541817 KRT76Q01546 638 aa11.25□□□□□ -0.61
CHFR-220ENST00000541817 SNW1Q13573 536 aaKnown RBP11.25□□□□□ -0.61
CHFR-220ENST00000541817 ZNF528Q3MIS6 628 aa11.25□□□□□ -0.61
CHFR-220ENST00000541817 SLC24A5Q71RS6 500 aa11.25□□□□□ -0.61
CHFR-220ENST00000541817 VPS52Q8N1B4 723 aa11.25□□□□□ -0.61
CHFR-220ENST00000541817 RNF169Q8NCN4 708 aa11.25□□□□□ -0.61
CHFR-220ENST00000541817 TMEM40Q8WWA1 233 aa11.25□□□□□ -0.61
CHFR-220ENST00000541817 GLG1Q92896 1179 aa11.25□□□□□ -0.61
CHFR-220ENST00000541817 MAF1Q9H063 256 aa11.25□□□□□ -0.61
CHFR-220ENST00000541817 ZSCAN32Q9NX65 697 aa11.25□□□□□ -0.61
CHFR-220ENST00000541817 PKD2L1Q9P0L9 805 aa11.25□□□□□ -0.61
CHFR-220ENST00000541817 ANAPC4Q9UJX5 808 aa11.25□□□□□ -0.61
CHFR-220ENST00000541817 FBXO4Q9UKT5 387 aa11.25□□□□□ -0.61
CHFR-220ENST00000541817 ST3GAL5Q9UNP4 418 aa11.25□□□□□ -0.61
CHFR-220ENST00000541817 PCDHGA2Q9Y5H1 932 aa11.25□□□□□ -0.61
CHFR-220ENST00000541817 SQORQ9Y6N5 450 aa11.25□□□□□ -0.61
CHFR-220ENST00000541817 ANKRD11Q6UB99 2663 aaPredicted RBP11.25□□□□□ -0.61
CHFR-220ENST00000541817 LAMA4Q16363 1823 aa11.25□□□□□ -0.61
CHFR-220ENST00000541817 LILRB5O75023 590 aa11.24□□□□□ -0.61
CHFR-220ENST00000541817 ATP9AO75110 1047 aa11.24□□□□□ -0.61
CHFR-220ENST00000541817 FGRP09769 529 aa11.24□□□□□ -0.61
CHFR-220ENST00000541817 PPM1AP35813 382 aa11.24□□□□□ -0.61
CHFR-220ENST00000541817 UBXN2BQ14CS0 331 aa11.24□□□□□ -0.61
CHFR-220ENST00000541817 GNPTABQ3T906 1256 aa11.24□□□□□ -0.61
CHFR-220ENST00000541817 ZMYM1Q5SVZ6 1142 aa11.24□□□□□ -0.61
CHFR-220ENST00000541817 TMEM173Q86WV6 379 aaPredicted RBP11.24□□□□□ -0.61
CHFR-220ENST00000541817 ZBTB44Q8NCP5 570 aa11.24□□□□□ -0.61
CHFR-220ENST00000541817 RPP25Q9BUL9 199 aaKnown RBP11.24□□□□□ -0.61
CHFR-220ENST00000541817 AMNQ9BXJ7 453 aa11.24□□□□□ -0.61
CHFR-220ENST00000541817 BCO2Q9BYV7 579 aa11.24□□□□□ -0.61
CHFR-220ENST00000541817 TMEM117Q9H0C3 514 aa11.24□□□□□ -0.61
CHFR-220ENST00000541817 ZBP1Q9H171 429 aa11.24□□□□□ -0.61
CHFR-220ENST00000541817 SFXN1Q9H9B4 322 aa11.24□□□□□ -0.61
CHFR-220ENST00000541817 C1orf112Q9NSG2 853 aa11.24□□□□□ -0.61
CHFR-220ENST00000541817 TMEM161AQ9NX61 479 aa11.24□□□□□ -0.61
CHFR-220ENST00000541817 ERAP1Q9NZ08 941 aa11.24□□□□□ -0.61
CHFR-220ENST00000541817 RALGAPA1Q6GYQ0 2036 aa11.23□□□□□ -0.61
CHFR-220ENST00000541817 FIBPO43427 364 aa11.23□□□□□ -0.61
CHFR-220ENST00000541817 HMMRO75330 724 aa11.23□□□□□ -0.61
CHFR-220ENST00000541817 SSBP05455 408 aaKnown RBP eCLIP11.23□□□□□ -0.61
CHFR-220ENST00000541817 BCAR1P56945 870 aa11.23□□□□□ -0.61
CHFR-220ENST00000541817 PLCB4Q15147 1175 aa11.23□□□□□ -0.61
CHFR-220ENST00000541817 NONOQ15233 471 aaKnown RBP eCLIP11.23□□□□□ -0.61
CHFR-220ENST00000541817 LRSAM1Q6UWE0 723 aa11.23□□□□□ -0.61
CHFR-220ENST00000541817 STAG2Q8N3U4 1231 aa11.23□□□□□ -0.61
CHFR-220ENST00000541817 PNMA1Q8ND90 353 aa11.23□□□□□ -0.61
CHFR-220ENST00000541817 BBXQ8WY36 941 aaPredicted RBP11.23□□□□□ -0.61
CHFR-220ENST00000541817 TTC14Q96N46 770 aa11.23□□□□□ -0.61
CHFR-220ENST00000541817 INPP4AQ96PE3 977 aaPredicted RBP11.23□□□□□ -0.61
CHFR-220ENST00000541817 LRRCC1Q9C099 1032 aa11.23□□□□□ -0.61
CHFR-220ENST00000541817 FAM170BA6NMN3 283 aa11.22□□□□□ -0.61
CHFR-220ENST00000541817 TRIM6-TRIM34B2RNG4 842 aa11.22□□□□□ -0.61
CHFR-220ENST00000541817 GCOM1H8Y6P7 765 aaPredicted RBP11.22□□□□□ -0.61
CHFR-220ENST00000541817 TBC1D4O60343 1298 aa11.22□□□□□ -0.61
CHFR-220ENST00000541817 POLR2MP0CAP2 368 aa11.22□□□□□ -0.61
CHFR-220ENST00000541817 SPINK2P20155 84 aa11.22□□□□□ -0.61
CHFR-220ENST00000541817 KLRC2P26717 231 aa11.22□□□□□ -0.61
CHFR-220ENST00000541817 STARD6P59095 220 aa11.22□□□□□ -0.61
CHFR-220ENST00000541817 GPC5P78333 572 aa11.22□□□□□ -0.61
CHFR-220ENST00000541817 FAM189BP81408 668 aa11.22□□□□□ -0.61
CHFR-220ENST00000541817 SHC2P98077 582 aa11.22□□□□□ -0.61
CHFR-220ENST00000541817 GHRHRQ02643 423 aa11.22□□□□□ -0.61
CHFR-220ENST00000541817 RING1Q06587 406 aa11.22□□□□□ -0.61
CHFR-220ENST00000541817 WTAPQ15007 396 aa11.22□□□□□ -0.61
CHFR-220ENST00000541817 CLLU1OSQ5K130 101 aa11.22□□□□□ -0.61
CHFR-220ENST00000541817 UNQ6494/PRO21346Q6UXR6 183 aa11.22□□□□□ -0.61
CHFR-220ENST00000541817 PRR23BQ6ZRT6 265 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms