RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 SLITRK3O94933 977 aa18.81■□□□□ 0.6
SPIDR-227ENST00000541342 MATR3P43243 847 aaKnown RBP eCLIP18.81■□□□□ 0.62e-6■■■■■ 27.8
SPIDR-227ENST00000541342 GFPT1Q06210 699 aaPredicted RBP18.81■□□□□ 0.6
SPIDR-227ENST00000541342 CTTNQ14247 550 aaKnown RBP18.81■□□□□ 0.6
SPIDR-227ENST00000541342 FAM26FQ5R3K3 315 aa18.81■□□□□ 0.6
SPIDR-227ENST00000541342 PACS2Q86VP3 889 aa18.81■□□□□ 0.6
SPIDR-227ENST00000541342 FAM76AQ8TAV0 307 aa18.81■□□□□ 0.6
SPIDR-227ENST00000541342 IQCDQ96DY2 449 aa18.81■□□□□ 0.6
SPIDR-227ENST00000541342 UNC45AQ9H3U1 944 aa18.81■□□□□ 0.6
SPIDR-227ENST00000541342 ADARB2Q9NS39 739 aaKnown RBP18.81■□□□□ 0.6
SPIDR-227ENST00000541342 AFG3L2Q9Y4W6 797 aa18.81■□□□□ 0.6
SPIDR-227ENST00000541342 GRIN2DO15399 1336 aa18.81■□□□□ 0.6
SPIDR-227ENST00000541342 PJA2O43164 708 aa18.81■□□□□ 0.6
SPIDR-227ENST00000541342 NOP2P46087 812 aaKnown RBP18.81■□□□□ 0.6
SPIDR-227ENST00000541342 GIT2Q14161 759 aa18.81■□□□□ 0.6
SPIDR-227ENST00000541342 SUPT20HL1Q3ZLR7 823 aa18.81■□□□□ 0.6
SPIDR-227ENST00000541342 B3GNT9Q6UX72 402 aa18.81■□□□□ 0.6
SPIDR-227ENST00000541342 TAAR1Q96RJ0 339 aa18.81■□□□□ 0.6
SPIDR-227ENST00000541342 WDR11Q9BZH6 1224 aa18.81■□□□□ 0.6
SPIDR-227ENST00000541342 FRMPD4Q14CM0 1322 aa18.81■□□□□ 0.6
SPIDR-227ENST00000541342 IRAK1P51617 712 aa18.8■□□□□ 0.6
SPIDR-227ENST00000541342 MRPS9P82933 396 aaKnown RBP18.8■□□□□ 0.6
SPIDR-227ENST00000541342 CCDC65Q8IXS2 484 aa18.8■□□□□ 0.6
SPIDR-227ENST00000541342 DYDC2Q96IM9 177 aa18.8■□□□□ 0.6
SPIDR-227ENST00000541342 PTPRFP10586 1907 aa18.8■□□□□ 0.6
SPIDR-227ENST00000541342 IPO5O00410 1097 aaKnown RBP18.8■□□□□ 0.6
SPIDR-227ENST00000541342 KCNMA1Q12791 1236 aa18.8■□□□□ 0.6
SPIDR-227ENST00000541342 BHMT2Q9H2M3 363 aa18.8■□□□□ 0.6
SPIDR-227ENST00000541342 RBM12Q9NTZ6 932 aaKnown RBP18.8■□□□□ 0.6
SPIDR-227ENST00000541342 ADAMTS5Q9UNA0 930 aa18.8■□□□□ 0.6
SPIDR-227ENST00000541342 HYOU1Q9Y4L1 999 aa18.8■□□□□ 0.6
SPIDR-227ENST00000541342 CTDP1Q9Y5B0 961 aaPredicted RBP18.8■□□□□ 0.6
SPIDR-227ENST00000541342 C19orf81C9J6K1 198 aa18.8■□□□□ 0.6
SPIDR-227ENST00000541342 ADM5C9JUS6 153 aa18.8■□□□□ 0.6
SPIDR-227ENST00000541342 KLHDC7AQ5VTJ3 777 aa18.8■□□□□ 0.6
SPIDR-227ENST00000541342 RUBCNQ92622 972 aa18.8■□□□□ 0.6
SPIDR-227ENST00000541342 REEP2Q9BRK0 252 aa18.8■□□□□ 0.6
SPIDR-227ENST00000541342 STIM2Q9P246 746 aa18.8■□□□□ 0.6
SPIDR-227ENST00000541342 WRAP73Q9P2S5 460 aaPredicted RBP18.8■□□□□ 0.6
SPIDR-227ENST00000541342 RABGAP1Q9Y3P9 1069 aa18.8■□□□□ 0.6
SPIDR-227ENST00000541342 ZBTB39O15060 712 aa18.79■□□□□ 0.6
SPIDR-227ENST00000541342 AKR1B10O60218 316 aa18.79■□□□□ 0.6
SPIDR-227ENST00000541342 DSG3P32926 999 aa18.79■□□□□ 0.6
SPIDR-227ENST00000541342 HERC4Q5GLZ8 1057 aaPredicted RBP18.79■□□□□ 0.6
SPIDR-227ENST00000541342 MYOCDQ8IZQ8 938 aa18.79■□□□□ 0.6
SPIDR-227ENST00000541342 PIGOQ8TEQ8 1089 aa18.79■□□□□ 0.6
SPIDR-227ENST00000541342 MS4A14Q96JA4 679 aa18.79■□□□□ 0.6
SPIDR-227ENST00000541342 RUSC1Q9BVN2 902 aa18.79■□□□□ 0.6
SPIDR-227ENST00000541342 TUFT1Q9NNX1 390 aa18.79■□□□□ 0.6
SPIDR-227ENST00000541342 KCNH7Q9NS40 1196 aa18.79■□□□□ 0.6
SPIDR-227ENST00000541342 TCP1P17987 556 aaKnown RBP18.79■□□□□ 0.6
SPIDR-227ENST00000541342 SKIDA1Q1XH10 827 aa18.79■□□□□ 0.6
SPIDR-227ENST00000541342 PCNX4Q63HM2 1172 aa18.79■□□□□ 0.6
SPIDR-227ENST00000541342 PDXDC1Q6P996 788 aa18.79■□□□□ 0.6
SPIDR-227ENST00000541342 TPH2Q8IWU9 490 aa18.79■□□□□ 0.6
SPIDR-227ENST00000541342 DEF6Q9H4E7 631 aa18.79■□□□□ 0.6
SPIDR-227ENST00000541342 MAP3K20Q9NYL2 800 aaKnown RBP18.79■□□□□ 0.6
SPIDR-227ENST00000541342 SNCAIPQ9Y6H5 919 aa18.79■□□□□ 0.6
SPIDR-227ENST00000541342 TLR2O60603 784 aa18.79■□□□□ 0.6
SPIDR-227ENST00000541342 EYA4O95677 639 aa18.79■□□□□ 0.6
SPIDR-227ENST00000541342 KRT18P05783 430 aaKnown RBP18.79■□□□□ 0.6
SPIDR-227ENST00000541342 FDX1P10109 184 aa18.79■□□□□ 0.6
SPIDR-227ENST00000541342 EIF2AK2P19525 551 aaKnown RBP18.79■□□□□ 0.6
SPIDR-227ENST00000541342 VGLL4Q14135 290 aa18.79■□□□□ 0.6
SPIDR-227ENST00000541342 ZCWPW2Q504Y3 356 aa18.79■□□□□ 0.6
SPIDR-227ENST00000541342 TTMPQ5BVD1 217 aa18.79■□□□□ 0.6
SPIDR-227ENST00000541342 BCAS3Q9H6U6 928 aa18.79■□□□□ 0.6
SPIDR-227ENST00000541342 ZNF214Q9UL59 606 aaPredicted RBP18.79■□□□□ 0.6
SPIDR-227ENST00000541342 UBIAD1Q9Y5Z9 338 aa18.79■□□□□ 0.6
SPIDR-227ENST00000541342 NOL4O94818 638 aa18.78■□□□□ 0.6
SPIDR-227ENST00000541342 BCRP11274 1271 aa18.78■□□□□ 0.6
SPIDR-227ENST00000541342 HOXA7P31268 230 aaPredicted RBP18.78■□□□□ 0.6
SPIDR-227ENST00000541342 LRRC63Q05C16 580 aa18.78■□□□□ 0.6
SPIDR-227ENST00000541342 TKFCQ3LXA3 575 aa18.78■□□□□ 0.6
SPIDR-227ENST00000541342 CATSPERGQ6ZRH7 1159 aa18.78■□□□□ 0.6
SPIDR-227ENST00000541342 PKD2L1Q9P0L9 805 aa18.78■□□□□ 0.6
SPIDR-227ENST00000541342 BUB1O43683 1085 aa18.78■□□□□ 0.6
SPIDR-227ENST00000541342 MAGEA1P43355 309 aa18.78■□□□□ 0.6
SPIDR-227ENST00000541342 TMEM132BQ14DG7 1078 aa18.78■□□□□ 0.6
SPIDR-227ENST00000541342 PGM5Q15124 567 aa18.78■□□□□ 0.6
SPIDR-227ENST00000541342 C9orf131Q5VYM1 1079 aa18.78■□□□□ 0.6
SPIDR-227ENST00000541342 RNF207Q6ZRF8 634 aa18.78■□□□□ 0.6
SPIDR-227ENST00000541342 SCFD1Q8WVM8 642 aa18.78■□□□□ 0.6
SPIDR-227ENST00000541342 ARL8AQ96BM9 186 aa18.78■□□□□ 0.6
SPIDR-227ENST00000541342 TEKT3Q9BXF9 490 aa18.78■□□□□ 0.6
SPIDR-227ENST00000541342 RNF146Q9NTX7 359 aa18.78■□□□□ 0.6
SPIDR-227ENST00000541342 DHX15O43143 795 aaKnown RBP18.77■□□□□ 0.6
SPIDR-227ENST00000541342 CASP5P51878 434 aa18.77■□□□□ 0.6
SPIDR-227ENST00000541342 NSMFQ6X4W1 530 aa18.77■□□□□ 0.6
SPIDR-227ENST00000541342 ALS2CR12Q96Q35 445 aa18.77■□□□□ 0.6
SPIDR-227ENST00000541342 POLD4Q9HCU8 107 aa18.77■□□□□ 0.6
SPIDR-227ENST00000541342 RSPH10B2B2RC85 870 aa18.77■□□□□ 0.6
SPIDR-227ENST00000541342 RBAK-RBAKDNI3L0D1 243 aa18.77■□□□□ 0.6
SPIDR-227ENST00000541342 DDX39AO00148 427 aaKnown RBP18.77■□□□□ 0.6
SPIDR-227ENST00000541342 RSPH10BP0C881 870 aa18.77■□□□□ 0.6
SPIDR-227ENST00000541342 TNFRSF8P28908 595 aa18.77■□□□□ 0.6
SPIDR-227ENST00000541342 ITGB3BPQ13352 177 aaPredicted RBP18.77■□□□□ 0.6
SPIDR-227ENST00000541342 COG2Q14746 738 aa18.77■□□□□ 0.6
SPIDR-227ENST00000541342 SNRNP48Q6IEG0 339 aaKnown RBP18.77■□□□□ 0.6
SPIDR-227ENST00000541342 CCDC70Q6NSX1 233 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms