RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 SSU72P8A0A1W2PR75 194 aa11.4□□□□□ -0.58
CHFR-219ENST00000541341 PJA2O43164 708 aa11.4□□□□□ -0.58
CHFR-219ENST00000541341 SLC26A4O43511 780 aa11.4□□□□□ -0.58
CHFR-219ENST00000541341 COBLO75128 1261 aa11.4□□□□□ -0.58
CHFR-219ENST00000541341 PHACTR2O75167 634 aa11.4□□□□□ -0.58
CHFR-219ENST00000541341 AKR1B1P15121 316 aa11.4□□□□□ -0.58
CHFR-219ENST00000541341 ERCC3P19447 782 aa11.4□□□□□ -0.58
CHFR-219ENST00000541341 CCNE1P24864 410 aa11.4□□□□□ -0.58
CHFR-219ENST00000541341 ANXA13P27216 316 aa11.4□□□□□ -0.58
CHFR-219ENST00000541341 SLC8A1P32418 973 aa11.4□□□□□ -0.58
CHFR-219ENST00000541341 CCT6AP40227 531 aaKnown RBP11.4□□□□□ -0.58
CHFR-219ENST00000541341 UBA7P41226 1012 aa11.4□□□□□ -0.58
CHFR-219ENST00000541341 GYS2P54840 703 aa11.4□□□□□ -0.58
CHFR-219ENST00000541341 GNGT1P63211 74 aa11.4□□□□□ -0.58
CHFR-219ENST00000541341 TNNC1P63316 161 aa11.4□□□□□ -0.58
CHFR-219ENST00000541341 TBC1D8BQ0IIM8 1120 aa11.4□□□□□ -0.58
CHFR-219ENST00000541341 E2F4Q16254 413 aa11.4□□□□□ -0.58
CHFR-219ENST00000541341 IFIT1BQ5T764 474 aaKnown RBP11.4□□□□□ -0.58
CHFR-219ENST00000541341 C8orf74Q6P047 294 aa11.4□□□□□ -0.58
CHFR-219ENST00000541341 PDXDC2PQ6P474 469 aa11.4□□□□□ -0.58
CHFR-219ENST00000541341 DTHD1Q6ZMT9 781 aa11.4□□□□□ -0.58
CHFR-219ENST00000541341 TMEM179Q6ZVK1 233 aa11.4□□□□□ -0.58
CHFR-219ENST00000541341 TEX2Q8IWB9 1127 aa11.4□□□□□ -0.58
CHFR-219ENST00000541341 NOA1Q8NC60 698 aaKnown RBP11.4□□□□□ -0.58
CHFR-219ENST00000541341 GIMAP7Q8NHV1 300 aa11.4□□□□□ -0.58
CHFR-219ENST00000541341 ZNF507Q8TCN5 953 aa11.4□□□□□ -0.58
CHFR-219ENST00000541341 LPAR1Q92633 364 aa11.4□□□□□ -0.58
CHFR-219ENST00000541341 ATG4CQ96DT6 458 aa11.4□□□□□ -0.58
CHFR-219ENST00000541341 CALR3Q96L12 384 aaKnown RBP11.4□□□□□ -0.58
CHFR-219ENST00000541341 AIFM3Q96NN9 605 aa11.4□□□□□ -0.58
CHFR-219ENST00000541341 NOX5Q96PH1 765 aa11.4□□□□□ -0.58
CHFR-219ENST00000541341 EPN3Q9H201 632 aa11.4□□□□□ -0.58
CHFR-219ENST00000541341 NHEJ1Q9H9Q4 299 aaPredicted RBP11.4□□□□□ -0.58
CHFR-219ENST00000541341 TOMM22Q9NS69 142 aa11.4□□□□□ -0.58
CHFR-219ENST00000541341 PRUNE2Q8WUY3 3088 aa11.4□□□□□ -0.58
CHFR-219ENST00000541341 TTC26A0AVF1 554 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 TSPY2A6NKD2 308 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 N4BP1O75113 896 aaKnown RBP11.39□□□□□ -0.59
CHFR-219ENST00000541341 FLOT1O75955 427 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 TSPY3P0CV98 308 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 TSPY8P0CW00 308 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 CYBAP13498 195 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 CD44P16070 742 aaKnown RBP11.39□□□□□ -0.59
CHFR-219ENST00000541341 STX17P56962 302 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 TFAP4Q01664 338 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 PSMD2Q13200 908 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 PTGDRQ13258 359 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 CUL1Q13616 776 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 NEDD9Q14511 834 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 COG2Q14746 738 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 TRIM60Q495X7 471 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 VWA3BQ502W6 1294 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 C9orf50Q5SZB4 431 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 NCAPH2Q6IBW4 605 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 GIMAP8Q8ND71 665 aaPredicted RBP11.39□□□□□ -0.59
CHFR-219ENST00000541341 RASSF8Q8NHQ8 419 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 NUP133Q8WUM0 1156 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 ANKS1AQ92625 1134 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 PCMTD1Q96MG8 357 aaPredicted RBP11.39□□□□□ -0.59
CHFR-219ENST00000541341 GUCD1Q96NT3 240 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 MED15Q96RN5 788 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 ZSCAN10Q96SZ4 725 aaPredicted RBP11.39□□□□□ -0.59
CHFR-219ENST00000541341 MMS19Q96T76 1030 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 TUBGCP2Q9BSJ2 902 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 SPATC1LQ9H0A9 340 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 IL17RBQ9NRM6 502 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 GJB4Q9NTQ9 266 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 TAB2Q9NYJ8 693 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 PRKAG2Q9UGJ0 569 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 SYNPO2Q9UMS6 1093 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 KCNJ14Q9UNX9 436 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 PLAGL2Q9UPG8 496 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 STXBP5LQ9Y2K9 1186 aa11.39□□□□□ -0.59
CHFR-219ENST00000541341 KBTBD13C9JR72 458 aa11.38□□□□□ -0.59
CHFR-219ENST00000541341 GNA14O95837 355 aa11.38□□□□□ -0.59
CHFR-219ENST00000541341 PGK2P07205 417 aa11.38□□□□□ -0.59
CHFR-219ENST00000541341 SCG2P13521 617 aa11.38□□□□□ -0.59
CHFR-219ENST00000541341 ADCYAP1R1P41586 468 aa11.38□□□□□ -0.59
CHFR-219ENST00000541341 MTIF2P46199 727 aaKnown RBP11.38□□□□□ -0.59
CHFR-219ENST00000541341 CCT5P48643 541 aa11.38□□□□□ -0.59
CHFR-219ENST00000541341 SMTNP53814 917 aa11.38□□□□□ -0.59
CHFR-219ENST00000541341 NLRP5P59047 1200 aa11.38□□□□□ -0.59
CHFR-219ENST00000541341 SEC23AQ15436 765 aa11.38□□□□□ -0.59
CHFR-219ENST00000541341 SHHQ15465 462 aa11.38□□□□□ -0.59
CHFR-219ENST00000541341 CCDC96Q2M329 555 aa11.38□□□□□ -0.59
CHFR-219ENST00000541341 HSP90AA4PQ58FG1 418 aa11.38□□□□□ -0.59
CHFR-219ENST00000541341 FAM47AQ5JRC9 791 aa11.38□□□□□ -0.59
CHFR-219ENST00000541341 RRP12Q5JTH9 1297 aaKnown RBP11.38□□□□□ -0.59
CHFR-219ENST00000541341 RCSD1Q6JBY9 416 aa11.38□□□□□ -0.59
CHFR-219ENST00000541341 LBX2Q6XYB7 198 aa11.38□□□□□ -0.59
CHFR-219ENST00000541341 SLC39A5Q6ZMH5 540 aa11.38□□□□□ -0.59
CHFR-219ENST00000541341 SND1Q7KZF4 910 aaKnown RBP eCLIP11.38□□□□□ -0.59
CHFR-219ENST00000541341 DGKHQ86XP1 1220 aa11.38□□□□□ -0.59
CHFR-219ENST00000541341 CSGALNACT2Q8N6G5 542 aa11.38□□□□□ -0.59
CHFR-219ENST00000541341 SPATA4Q8NEY3 305 aa11.38□□□□□ -0.59
CHFR-219ENST00000541341 LMBR1Q8WVP7 490 aa11.38□□□□□ -0.59
CHFR-219ENST00000541341 BADQ92934 168 aa11.38□□□□□ -0.59
CHFR-219ENST00000541341 MKL1Q969V6 931 aa11.38□□□□□ -0.59
CHFR-219ENST00000541341 LENG1Q96BZ8 264 aaPredicted RBP11.38□□□□□ -0.59
CHFR-219ENST00000541341 IFIH1Q9BYX4 1025 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms