RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 UTP11Q9Y3A2 253 aaKnown RBP16.13■□□□□ 0.17
AC005840.4-201ENST00000541242 CDK5RAP2Q96SN8 1893 aa16.13■□□□□ 0.17
AC005840.4-201ENST00000541242 SPDYE3A6NKU9 549 aa16.13■□□□□ 0.17
AC005840.4-201ENST00000541242 CES2O00748 559 aa16.13■□□□□ 0.17
AC005840.4-201ENST00000541242 GSTA1P08263 222 aa16.13■□□□□ 0.17
AC005840.4-201ENST00000541242 IL1R1P14778 569 aa16.13■□□□□ 0.17
AC005840.4-201ENST00000541242 RASA1P20936 1047 aa16.13■□□□□ 0.17
AC005840.4-201ENST00000541242 ATP2B4P23634 1241 aa16.13■□□□□ 0.17
AC005840.4-201ENST00000541242 RIPK1Q13546 671 aa16.13■□□□□ 0.17
AC005840.4-201ENST00000541242 TPCN2Q8NHX9 752 aa16.13■□□□□ 0.17
AC005840.4-201ENST00000541242 RNF25Q96BH1 459 aaPredicted RBP16.13■□□□□ 0.17
AC005840.4-201ENST00000541242 CENPTQ96BT3 561 aa16.13■□□□□ 0.17
AC005840.4-201ENST00000541242 RBM17Q96I25 401 aaKnown RBP16.13■□□□□ 0.17
AC005840.4-201ENST00000541242 CDK5RAP3Q96JB5 506 aa16.13■□□□□ 0.17
AC005840.4-201ENST00000541242 UIMC1Q96RL1 719 aa16.13■□□□□ 0.17
AC005840.4-201ENST00000541242 YIPF3Q9GZM5 350 aa16.13■□□□□ 0.17
AC005840.4-201ENST00000541242 CCDC113Q9H0I3 377 aa16.13■□□□□ 0.17
AC005840.4-201ENST00000541242 NUCKS1Q9H1E3 243 aaKnown RBP16.13■□□□□ 0.17
AC005840.4-201ENST00000541242 ECT2Q9H8V3 914 aa16.13■□□□□ 0.17
AC005840.4-201ENST00000541242 INTS9Q9NV88 658 aaKnown RBP16.13■□□□□ 0.17
AC005840.4-201ENST00000541242 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.13■□□□□ 0.17
AC005840.4-201ENST00000541242 NAV1Q8NEY1 1877 aa16.13■□□□□ 0.17
AC005840.4-201ENST00000541242 PPFIA2O75334 1257 aa16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 SMNDC1O75940 238 aaKnown RBP eCLIP16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 KRT16P08779 473 aa16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 TSPY3P0CV98 308 aa16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 TSPY8P0CW00 308 aa16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 MMP13P45452 471 aa16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 NAPAP54920 295 aa16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 CACNB1Q02641 598 aaPredicted RBP16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 ZNF268Q14587 947 aaPredicted RBP16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 ITIH4Q14624 930 aa16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 MIS18BP1Q6P0N0 1132 aa16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 POTEAQ6S8J7 498 aa16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 CCDC26Q8TAB7 109 aa16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 TBC1D16Q8TBP0 767 aa16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 KCNV2Q8TDN2 545 aa16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 TBCKQ8TEA7 893 aa16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 GLG1Q92896 1179 aa16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 GJA10Q969M2 543 aa16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 GANQ9H2C0 597 aa16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 BATF3Q9NR55 127 aa16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 TMEM260Q9NX78 707 aa16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 AIPL1Q9NZN9 384 aa16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 BIN2Q9UBW5 565 aaPredicted RBP16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 PVALEFA0A1B0GWK0 134 aa16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 CCDC188H7C350 402 aa16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 FGGP02679 453 aa16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 LDHCP07864 332 aa16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 SLC9A1P19634 815 aa16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 FKBP3Q00688 224 aaKnown RBP16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 PRPF4BQ13523 1007 aaKnown RBP16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 LRRC14Q15048 493 aa16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 NONOQ15233 471 aaKnown RBP eCLIP16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 IRF2BP2Q7Z5L9 587 aa16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 MYOCDQ8IZQ8 938 aa16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 DAGLBQ8NCG7 672 aa16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 TXLNGYQ9BZA5 131 aa16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 NAGPAQ9UK23 515 aa16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 BRWD3Q6RI45 1802 aa16.12■□□□□ 0.17
AC005840.4-201ENST00000541242 GPR75-ASB3A0A0A6YYF3 556 aa16.11■□□□□ 0.17
AC005840.4-201ENST00000541242 MYBL1P10243 752 aa16.11■□□□□ 0.17
AC005840.4-201ENST00000541242 PLTPP55058 493 aa16.11■□□□□ 0.17
AC005840.4-201ENST00000541242 GRM4Q14833 912 aa16.11■□□□□ 0.17
AC005840.4-201ENST00000541242 ECM1Q16610 540 aa16.11■□□□□ 0.17
AC005840.4-201ENST00000541242 ZCWPW2Q504Y3 356 aa16.11■□□□□ 0.17
AC005840.4-201ENST00000541242 ALKBH5Q6P6C2 394 aaKnown RBP16.11■□□□□ 0.17
AC005840.4-201ENST00000541242 NEK8Q86SG6 692 aa16.11■□□□□ 0.17
AC005840.4-201ENST00000541242 ZNF444Q8N0Y2 327 aaPredicted RBP16.11■□□□□ 0.17
AC005840.4-201ENST00000541242 EPS8L3Q8TE67 593 aaKnown RBP16.11■□□□□ 0.17
AC005840.4-201ENST00000541242 TMEM47Q9BQJ4 181 aa16.11■□□□□ 0.17
AC005840.4-201ENST00000541242 ZMYND12Q9H0C1 365 aa16.11■□□□□ 0.17
AC005840.4-201ENST00000541242 ERVK-5Q9HDB9 667 aa16.11■□□□□ 0.17
AC005840.4-201ENST00000541242 FAM114A2Q9NRY5 505 aa16.11■□□□□ 0.17
AC005840.4-201ENST00000541242 SPATS2LQ9NUQ6 558 aaKnown RBP16.11■□□□□ 0.17
AC005840.4-201ENST00000541242 SLC5A4Q9NY91 659 aa16.11■□□□□ 0.17
AC005840.4-201ENST00000541242 PNMA3Q9UL41 463 aa16.11■□□□□ 0.17
AC005840.4-201ENST00000541242 POLRMTO00411 1230 aaKnown RBP16.11■□□□□ 0.17
AC005840.4-201ENST00000541242 RHBDL3P58872 404 aa16.11■□□□□ 0.17
AC005840.4-201ENST00000541242 SLC29A2Q14542 456 aa16.11■□□□□ 0.17
AC005840.4-201ENST00000541242 MFSD14BQ5SR56 506 aa16.11■□□□□ 0.17
AC005840.4-201ENST00000541242 PROM2Q8N271 834 aa16.11■□□□□ 0.17
AC005840.4-201ENST00000541242 MGARPQ8TDB4 240 aa16.11■□□□□ 0.17
AC005840.4-201ENST00000541242 SAAL1Q96ER3 474 aa16.11■□□□□ 0.17
AC005840.4-201ENST00000541242 SLITRK6Q9H5Y7 841 aa16.11■□□□□ 0.17
AC005840.4-201ENST00000541242 VAT1LQ9HCJ6 419 aa16.11■□□□□ 0.17
AC005840.4-201ENST00000541242 STX8Q9UNK0 236 aa16.11■□□□□ 0.17
AC005840.4-201ENST00000541242 SMCO2A6NFE2 343 aa16.1■□□□□ 0.17
AC005840.4-201ENST00000541242 CFAP73A6NFT4 308 aa16.1■□□□□ 0.17
AC005840.4-201ENST00000541242 BBOX1O75936 387 aa16.1■□□□□ 0.17
AC005840.4-201ENST00000541242 EPS15P42566 896 aa16.1■□□□□ 0.17
AC005840.4-201ENST00000541242 ABL2P42684 1182 aa16.1■□□□□ 0.17
AC005840.4-201ENST00000541242 PMS2P54278 862 aa16.1■□□□□ 0.17
AC005840.4-201ENST00000541242 POU5F1Q01860 360 aaKnown RBP16.1■□□□□ 0.17
AC005840.4-201ENST00000541242 COASYQ13057 564 aa16.1■□□□□ 0.17
AC005840.4-201ENST00000541242 THEMIS2Q5TEJ8 643 aa16.1■□□□□ 0.17
AC005840.4-201ENST00000541242 HOOK3Q86VS8 718 aa16.1■□□□□ 0.17
AC005840.4-201ENST00000541242 SPDYE1Q8NFV5 336 aaPredicted RBP16.1■□□□□ 0.17
AC005840.4-201ENST00000541242 SEC14L1Q92503 715 aa16.1■□□□□ 0.17
AC005840.4-201ENST00000541242 SNX24Q9Y343 169 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms