RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 OSMRQ99650 979 aa16.91■□□□□ 0.3
UBE3B-212ENST00000540230 CERS4Q9HA82 394 aa16.91■□□□□ 0.3
UBE3B-212ENST00000540230 PADI3Q9ULW8 664 aa16.91■□□□□ 0.3
UBE3B-212ENST00000540230 PCDHA12Q9UN75 941 aa16.91■□□□□ 0.3
UBE3B-212ENST00000540230 SPTBN5Q9NRC6 3674 aaKnown RBP16.91■□□□□ 0.3
UBE3B-212ENST00000540230 POTEMA6NI47 508 aa16.91■□□□□ 0.3
UBE3B-212ENST00000540230 ZBTB39O15060 712 aa16.91■□□□□ 0.3
UBE3B-212ENST00000540230 MAGEB2O15479 319 aa16.91■□□□□ 0.3
UBE3B-212ENST00000540230 AMHP03971 560 aa16.91■□□□□ 0.3
UBE3B-212ENST00000540230 TOB1P50616 345 aaPredicted RBP16.91■□□□□ 0.3
UBE3B-212ENST00000540230 TBC1D8BQ0IIM8 1120 aa16.91■□□□□ 0.3
UBE3B-212ENST00000540230 GNL2Q13823 731 aaKnown RBP16.91■□□□□ 0.3
UBE3B-212ENST00000540230 TTC38Q5R3I4 469 aa16.91■□□□□ 0.3
UBE3B-212ENST00000540230 RTN4RL1Q86UN2 441 aaPredicted RBP16.91■□□□□ 0.3
UBE3B-212ENST00000540230 ZBED2Q9BTP6 218 aa16.91■□□□□ 0.3
UBE3B-212ENST00000540230 TMX1Q9H3N1 280 aa16.91■□□□□ 0.3
UBE3B-212ENST00000540230 SUGCTQ9HAC7 445 aa16.91■□□□□ 0.3
UBE3B-212ENST00000540230 AKT3Q9Y243 479 aa16.91■□□□□ 0.3
UBE3B-212ENST00000540230 NOC2LQ9Y3T9 749 aaKnown RBP16.91■□□□□ 0.3
UBE3B-212ENST00000540230 SQORQ9Y6N5 450 aa16.91■□□□□ 0.3
UBE3B-212ENST00000540230 REV3LO60673 3130 aa16.9■□□□□ 0.3
UBE3B-212ENST00000540230 EPOPA6NHQ4 379 aa16.9■□□□□ 0.3
UBE3B-212ENST00000540230 SLITRK3O94933 977 aa16.9■□□□□ 0.3
UBE3B-212ENST00000540230 UPP2O95045 317 aa16.9■□□□□ 0.3
UBE3B-212ENST00000540230 ADGRE1Q14246 886 aa16.9■□□□□ 0.3
UBE3B-212ENST00000540230 TOP1MTQ969P6 601 aa16.9■□□□□ 0.3
UBE3B-212ENST00000540230 EIF2AK1Q9BQI3 630 aaKnown RBP16.9■□□□□ 0.3
UBE3B-212ENST00000540230 SMC3Q9UQE7 1217 aa16.9■□□□□ 0.3
UBE3B-212ENST00000540230 TTC3P53804 2025 aa16.89■□□□□ 0.29
UBE3B-212ENST00000540230 COL4A6Q14031 1691 aa16.89■□□□□ 0.29
UBE3B-212ENST00000540230 IGKV6-21A0A0C4DH24 114 aa16.89■□□□□ 0.29
UBE3B-212ENST00000540230 RFXAPO00287 272 aa16.89■□□□□ 0.29
UBE3B-212ENST00000540230 ENPP3O14638 875 aa16.89■□□□□ 0.29
UBE3B-212ENST00000540230 MGEA5O60502 916 aa16.89■□□□□ 0.29
UBE3B-212ENST00000540230 FOSL2P15408 326 aa16.89■□□□□ 0.29
UBE3B-212ENST00000540230 NLRP11P59045 1033 aaKnown RBP16.89■□□□□ 0.29
UBE3B-212ENST00000540230 HTRA4P83105 476 aaPredicted RBP16.89■□□□□ 0.29
UBE3B-212ENST00000540230 PAK2Q13177 524 aa16.89■□□□□ 0.29
UBE3B-212ENST00000540230 CUL4AQ13619 759 aa16.89■□□□□ 0.29
UBE3B-212ENST00000540230 FAM228AQ86W67 206 aa16.89■□□□□ 0.29
UBE3B-212ENST00000540230 C4orf19Q8IY42 314 aa16.89■□□□□ 0.29
UBE3B-212ENST00000540230 USP38Q8NB14 1042 aa16.89■□□□□ 0.29
UBE3B-212ENST00000540230 RAD9AQ99638 391 aa16.89■□□□□ 0.29
UBE3B-212ENST00000540230 ADAMTS10Q9H324 1103 aa16.89■□□□□ 0.29
UBE3B-212ENST00000540230 ERVK-5Q9HDB9 667 aa16.89■□□□□ 0.29
UBE3B-212ENST00000540230 CYP26B1Q9NR63 512 aa16.89■□□□□ 0.29
UBE3B-212ENST00000540230 TRANK1O15050 2925 aa16.88■□□□□ 0.29
UBE3B-212ENST00000540230 RPS6KA5O75582 802 aa16.88■□□□□ 0.29
UBE3B-212ENST00000540230 GPC3P51654 580 aa16.88■□□□□ 0.29
UBE3B-212ENST00000540230 NFX1Q12986 1120 aaKnown RBP16.88■□□□□ 0.29
UBE3B-212ENST00000540230 TPH2Q8IWU9 490 aa16.88■□□□□ 0.29
UBE3B-212ENST00000540230 C4orf32Q8N8J7 132 aa16.88■□□□□ 0.29
UBE3B-212ENST00000540230 MAP7D2Q96T17 732 aa16.88■□□□□ 0.29
UBE3B-212ENST00000540230 HSD17B14Q9BPX1 270 aa16.88■□□□□ 0.29
UBE3B-212ENST00000540230 BMP2KQ9NSY1 1161 aaPredicted RBP16.88■□□□□ 0.29
UBE3B-212ENST00000540230 KIF3AQ9Y496 699 aa16.88■□□□□ 0.29
UBE3B-212ENST00000540230 PCDHB6Q9Y5E3 794 aa16.88■□□□□ 0.29
UBE3B-212ENST00000540230 COL4A4P53420 1690 aaPredicted RBP16.88■□□□□ 0.29
UBE3B-212ENST00000540230 A0A087WWV3 80 aa16.87■□□□□ 0.29
UBE3B-212ENST00000540230 LINC01553A4QN01 128 aa16.87■□□□□ 0.29
UBE3B-212ENST00000540230 MAFO75444 373 aaPredicted RBP16.87■□□□□ 0.29
UBE3B-212ENST00000540230 OR52Z1P0C646 297 aa16.87■□□□□ 0.29
UBE3B-212ENST00000540230 TMOD1P28289 359 aa16.87■□□□□ 0.29
UBE3B-212ENST00000540230 YWHABP31946 246 aaKnown RBP16.87■□□□□ 0.29
UBE3B-212ENST00000540230 TRAPPC10P48553 1259 aa16.87■□□□□ 0.29
UBE3B-212ENST00000540230 CRYBB1P53674 252 aaPredicted RBP16.87■□□□□ 0.29
UBE3B-212ENST00000540230 MCTP1Q6DN14 999 aa16.87■□□□□ 0.29
UBE3B-212ENST00000540230 CEP170P1Q96L14 293 aa16.87■□□□□ 0.29
UBE3B-212ENST00000540230 ZSWIM4Q9H7M6 989 aa16.87■□□□□ 0.29
UBE3B-212ENST00000540230 ST3GAL5Q9UNP4 418 aa16.87■□□□□ 0.29
UBE3B-212ENST00000540230 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.87■□□□□ 0.29
UBE3B-212ENST00000540230 TECP42680 631 aa16.86■□□□□ 0.29
UBE3B-212ENST00000540230 ORC2Q13416 577 aaPredicted RBP16.86■□□□□ 0.29
UBE3B-212ENST00000540230 ARNTL2Q8WYA1 636 aa16.86■□□□□ 0.29
UBE3B-212ENST00000540230 NOL7Q9UMY1 257 aaKnown RBP16.86■□□□□ 0.29
UBE3B-212ENST00000540230 H3BQV1 296 aa16.86■□□□□ 0.29
UBE3B-212ENST00000540230 DKC1O60832 514 aaKnown RBP eCLIP16.86■□□□□ 0.29
UBE3B-212ENST00000540230 MED24O75448 989 aa16.86■□□□□ 0.29
UBE3B-212ENST00000540230 CSDE1O75534 798 aaKnown RBP16.86■□□□□ 0.29
UBE3B-212ENST00000540230 SPATA31C1P0DKV0 1188 aa16.86■□□□□ 0.29
UBE3B-212ENST00000540230 FGFR4P22455 802 aa16.86■□□□□ 0.29
UBE3B-212ENST00000540230 KSR1Q8IVT5 923 aa16.86■□□□□ 0.29
UBE3B-212ENST00000540230 CRIPAKQ8N1N5 446 aa16.86■□□□□ 0.29
UBE3B-212ENST00000540230 SP7Q8TDD2 431 aaPredicted RBP16.86■□□□□ 0.29
UBE3B-212ENST00000540230 YME1L1Q96TA2 773 aa16.86■□□□□ 0.29
UBE3B-212ENST00000540230 FTHL17Q9BXU8 183 aa16.86■□□□□ 0.29
UBE3B-212ENST00000540230 TSPYL2Q9H2G4 693 aaPredicted RBP16.86■□□□□ 0.29
UBE3B-212ENST00000540230 DHX33Q9H6R0 707 aaKnown RBP16.86■□□□□ 0.29
UBE3B-212ENST00000540230 RC3H2Q9HBD1 1191 aaKnown RBP16.86■□□□□ 0.29
UBE3B-212ENST00000540230 MTUS1Q9ULD2 1270 aa16.86■□□□□ 0.29
UBE3B-212ENST00000540230 INSL6Q9Y581 213 aa16.86■□□□□ 0.29
UBE3B-212ENST00000540230 LYPLA2O95372 231 aa16.85■□□□□ 0.29
UBE3B-212ENST00000540230 PTGDRQ13258 359 aa16.85■□□□□ 0.29
UBE3B-212ENST00000540230 XKR9Q5GH70 373 aa16.85■□□□□ 0.29
UBE3B-212ENST00000540230 LARP1BQ659C4 914 aaKnown RBP16.85■□□□□ 0.29
UBE3B-212ENST00000540230 MAFAQ8NHW3 353 aaPredicted RBP16.85■□□□□ 0.29
UBE3B-212ENST00000540230 NEK9Q8TD19 979 aa16.85■□□□□ 0.29
UBE3B-212ENST00000540230 PIGOQ8TEQ8 1089 aa16.85■□□□□ 0.29
UBE3B-212ENST00000540230 GAS2L1Q99501 681 aaPredicted RBP16.85■□□□□ 0.29
UBE3B-212ENST00000540230 C17orf80Q9BSJ5 609 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms