RNA–Protein interactions for RNA: ENST00000540122.5

PUDP-206, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-206ENST00000540122 SLC39A11Q8N1S5 342 aa17.79■□□□□ 0.44
PUDP-206ENST00000540122 NME8Q8N427 588 aa17.79■□□□□ 0.44
PUDP-206ENST00000540122 TMEM40Q8WWA1 233 aa17.79■□□□□ 0.44
PUDP-206ENST00000540122 PIGSQ96S52 555 aa17.79■□□□□ 0.44
PUDP-206ENST00000540122 PCYT2Q99447 389 aa17.79■□□□□ 0.44
PUDP-206ENST00000540122 CDHR5Q9HBB8 845 aa17.79■□□□□ 0.44
PUDP-206ENST00000540122 RNF19AQ9NV58 838 aa17.79■□□□□ 0.44
PUDP-206ENST00000540122 IGSF9Q9P2J2 1179 aa17.79■□□□□ 0.44
PUDP-206ENST00000540122 MAD2L2Q9UI95 211 aa17.79■□□□□ 0.44
PUDP-206ENST00000540122 FANCMQ8IYD8 2048 aa17.79■□□□□ 0.44
PUDP-206ENST00000540122 CCER2I3L3R5 266 aa17.78■□□□□ 0.44
PUDP-206ENST00000540122 CXCL14O95715 111 aa17.78■□□□□ 0.44
PUDP-206ENST00000540122 MX1P20591 662 aa17.78■□□□□ 0.44
PUDP-206ENST00000540122 PLCB4Q15147 1175 aa17.78■□□□□ 0.44
PUDP-206ENST00000540122 VARS2Q5ST30 1063 aaKnown RBP17.78■□□□□ 0.44
PUDP-206ENST00000540122 GPR149Q86SP6 731 aa17.78■□□□□ 0.44
PUDP-206ENST00000540122 CABP7Q86V35 215 aa17.78■□□□□ 0.44
PUDP-206ENST00000540122 GPR161Q8N6U8 529 aaKnown RBP17.78■□□□□ 0.44
PUDP-206ENST00000540122 SLC22A17Q8WUG5 538 aa17.78■□□□□ 0.44
PUDP-206ENST00000540122 EVI5LQ96CN4 794 aa17.78■□□□□ 0.44
PUDP-206ENST00000540122 CHAMP1Q96JM3 812 aa17.78■□□□□ 0.44
PUDP-206ENST00000540122 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.77■□□□□ 0.44
PUDP-206ENST00000540122 POTEMA6NI47 508 aa17.77■□□□□ 0.44
PUDP-206ENST00000540122 PRR5-ARHGAP8B1AHC4 643 aa17.77■□□□□ 0.44
PUDP-206ENST00000540122 B4E1Z4 1266 aa17.77■□□□□ 0.44
PUDP-206ENST00000540122 ARHGAP8P85298 464 aa17.77■□□□□ 0.44
PUDP-206ENST00000540122 LMNB2Q03252 620 aa17.77■□□□□ 0.44
PUDP-206ENST00000540122 ODR4Q5SWX8 454 aa17.77■□□□□ 0.44
PUDP-206ENST00000540122 POTEGQ6S5H5 508 aa17.77■□□□□ 0.44
PUDP-206ENST00000540122 RSAD2Q8WXG1 361 aa17.77■□□□□ 0.44
PUDP-206ENST00000540122 GPRASP2Q96D09 838 aa17.77■□□□□ 0.44
PUDP-206ENST00000540122 RTKNQ9BST9 563 aa17.77■□□□□ 0.44
PUDP-206ENST00000540122 SFXN1Q9H9B4 322 aa17.77■□□□□ 0.44
PUDP-206ENST00000540122 SIT1Q9Y3P8 196 aa17.77■□□□□ 0.44
PUDP-206ENST00000540122 ATRXP46100 2492 aa17.76■□□□□ 0.43
PUDP-206ENST00000540122 PALM3A6NDB9 673 aaPredicted RBP17.76■□□□□ 0.43
PUDP-206ENST00000540122 ZNF213O14771 459 aa17.76■□□□□ 0.43
PUDP-206ENST00000540122 GPR182O15218 404 aa17.76■□□□□ 0.43
PUDP-206ENST00000540122 HOXA2O43364 376 aa17.76■□□□□ 0.43
PUDP-206ENST00000540122 BMS1Q14692 1282 aaKnown RBP17.76■□□□□ 0.43
PUDP-206ENST00000540122 PHLDB3Q6NSJ2 640 aa17.76■□□□□ 0.43
PUDP-206ENST00000540122 MTHFD1LQ6UB35 978 aa17.76■□□□□ 0.43
PUDP-206ENST00000540122 MAML2Q8IZL2 1156 aaPredicted RBP17.76■□□□□ 0.43
PUDP-206ENST00000540122 TMEM87AQ8NBN3 555 aa17.76■□□□□ 0.43
PUDP-206ENST00000540122 AUTS2Q8WXX7 1259 aa17.76■□□□□ 0.43
PUDP-206ENST00000540122 TNPO1Q92973 898 aaKnown RBP17.76■□□□□ 0.43
PUDP-206ENST00000540122 CDHR1Q96JP9 859 aa17.76■□□□□ 0.43
PUDP-206ENST00000540122 PKD2L1Q9P0L9 805 aa17.76■□□□□ 0.43
PUDP-206ENST00000540122 ZSWIM5Q9P217 1185 aa17.76■□□□□ 0.43
PUDP-206ENST00000540122 DSC3Q14574 896 aa17.75■□□□□ 0.43
PUDP-206ENST00000540122 FAM228AQ86W67 206 aa17.75■□□□□ 0.43
PUDP-206ENST00000540122 ABI1Q8IZP0 508 aa17.75■□□□□ 0.43
PUDP-206ENST00000540122 ZBP1Q9H171 429 aa17.75■□□□□ 0.43
PUDP-206ENST00000540122 AZI2Q9H6S1 392 aa17.75■□□□□ 0.43
PUDP-206ENST00000540122 RIOX1Q9H6W3 641 aa17.75■□□□□ 0.43
PUDP-206ENST00000540122 PNMA6FA0A0J9YX94 578 aa17.74■□□□□ 0.43
PUDP-206ENST00000540122 SPTLC1O15269 473 aa17.74■□□□□ 0.43
PUDP-206ENST00000540122 N4BP1O75113 896 aaKnown RBP17.74■□□□□ 0.43
PUDP-206ENST00000540122 SRFP11831 508 aa17.74■□□□□ 0.43
PUDP-206ENST00000540122 GLULP15104 373 aa17.74■□□□□ 0.43
PUDP-206ENST00000540122 ITGB5P18084 799 aa17.74■□□□□ 0.43
PUDP-206ENST00000540122 METAP2P50579 478 aaKnown RBP eCLIP17.74■□□□□ 0.43
PUDP-206ENST00000540122 NMIQ13287 307 aaPredicted RBP17.74■□□□□ 0.43
PUDP-206ENST00000540122 LETM2Q2VYF4 491 aa17.74■□□□□ 0.43
PUDP-206ENST00000540122 IFIT1BQ5T764 474 aaKnown RBP17.74■□□□□ 0.43
PUDP-206ENST00000540122 VPS52Q8N1B4 723 aa17.74■□□□□ 0.43
PUDP-206ENST00000540122 SMARCC2Q8TAQ2 1214 aa17.74■□□□□ 0.43
PUDP-206ENST00000540122 IRAK3Q9Y616 596 aa17.74■□□□□ 0.43
PUDP-206ENST00000540122 NT5C1B-RDH14C9J2C7 533 aa17.73■□□□□ 0.43
PUDP-206ENST00000540122 CYTH3O43739 400 aa17.73■□□□□ 0.43
PUDP-206ENST00000540122 NONOQ15233 471 aaKnown RBP eCLIP17.73■□□□□ 0.43
PUDP-206ENST00000540122 CLLU1OSQ5K130 101 aa17.73■□□□□ 0.43
PUDP-206ENST00000540122 USP17L6PQ6QN14 398 aa17.73■□□□□ 0.43
PUDP-206ENST00000540122 KIAA0319LQ8IZA0 1049 aa17.73■□□□□ 0.43
PUDP-206ENST00000540122 SLC44A3Q8N4M1 653 aa17.73■□□□□ 0.43
PUDP-206ENST00000540122 GPR152Q8TDT2 470 aa17.73■□□□□ 0.43
PUDP-206ENST00000540122 TMEM169Q96HH4 297 aa17.73■□□□□ 0.43
PUDP-206ENST00000540122 UBAC1Q9BSL1 405 aa17.73■□□□□ 0.43
PUDP-206ENST00000540122 ARHGEF3Q9NR81 526 aa17.73■□□□□ 0.43
PUDP-206ENST00000540122 SALL3Q9BXA9 1300 aa17.72■□□□□ 0.43
PUDP-206ENST00000540122 SPDYE4A6NLX3 237 aa17.72■□□□□ 0.43
PUDP-206ENST00000540122 KLRC1P26715 233 aa17.72■□□□□ 0.43
PUDP-206ENST00000540122 BCAR1P56945 870 aa17.72■□□□□ 0.43
PUDP-206ENST00000540122 MTMR1Q13613 665 aa17.72■□□□□ 0.43
PUDP-206ENST00000540122 GIT2Q14161 759 aa17.72■□□□□ 0.43
PUDP-206ENST00000540122 ZNF528Q3MIS6 628 aa17.72■□□□□ 0.43
PUDP-206ENST00000540122 TMEM173Q86WV6 379 aaPredicted RBP17.72■□□□□ 0.43
PUDP-206ENST00000540122 PJA1Q8NG27 643 aa17.72■□□□□ 0.43
PUDP-206ENST00000540122 SECISBP2LQ93073 1101 aaKnown RBP17.72■□□□□ 0.43
PUDP-206ENST00000540122 BORCS6Q96GS4 357 aa17.72■□□□□ 0.43
PUDP-206ENST00000540122 PPP1R16BQ96T49 567 aa17.72■□□□□ 0.43
PUDP-206ENST00000540122 OSMRQ99650 979 aa17.72■□□□□ 0.43
PUDP-206ENST00000540122 JPH1Q9HDC5 661 aaPredicted RBP17.72■□□□□ 0.43
PUDP-206ENST00000540122 CTSAP10619 480 aa17.71■□□□□ 0.43
PUDP-206ENST00000540122 ALDH7A1P49419 539 aaKnown RBP17.71■□□□□ 0.43
PUDP-206ENST00000540122 KIZQ2M2Z5 673 aa17.71■□□□□ 0.43
PUDP-206ENST00000540122 C15orf39Q6ZRI6 1047 aa17.71■□□□□ 0.43
PUDP-206ENST00000540122 PLPPR4Q7Z2D5 763 aa17.71■□□□□ 0.43
PUDP-206ENST00000540122 PPFIBP1Q86W92 1011 aa17.71■□□□□ 0.43
PUDP-206ENST00000540122 CUL5Q93034 780 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms