RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 IKBKEQ14164 716 aa12.01□□□□□ -0.49
HMGA2-209ENST00000539662 GRIN2CQ14957 1233 aa12.01□□□□□ -0.49
HMGA2-209ENST00000539662 ECM1Q16610 540 aa12.01□□□□□ -0.49
HMGA2-209ENST00000539662 IER5Q5VY09 327 aa12.01□□□□□ -0.49
HMGA2-209ENST00000539662 GPR153Q6NV75 609 aa12.01□□□□□ -0.49
HMGA2-209ENST00000539662 FAM173BQ6P4H8 233 aa12.01□□□□□ -0.49
HMGA2-209ENST00000539662 RSPH3Q86UC2 560 aa12.01□□□□□ -0.49
HMGA2-209ENST00000539662 KSR1Q8IVT5 923 aa12.01□□□□□ -0.49
HMGA2-209ENST00000539662 SEPT8Q92599 483 aa12.01□□□□□ -0.49
HMGA2-209ENST00000539662 TNPO1Q92973 898 aaKnown RBP12.01□□□□□ -0.49
HMGA2-209ENST00000539662 SNX21Q969T3 373 aa12.01□□□□□ -0.49
HMGA2-209ENST00000539662 TIFAQ96CG3 184 aa12.01□□□□□ -0.49
HMGA2-209ENST00000539662 IFIH1Q9BYX4 1025 aaKnown RBP12.01□□□□□ -0.49
HMGA2-209ENST00000539662 ADAMTS10Q9H324 1103 aa12.01□□□□□ -0.49
HMGA2-209ENST00000539662 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.01□□□□□ -0.49
HMGA2-209ENST00000539662 PADI3Q9ULW8 664 aa12.01□□□□□ -0.49
HMGA2-209ENST00000539662 COL4A6Q14031 1691 aa12□□□□□ -0.49
HMGA2-209ENST00000539662 ABHD14A-ACY1A0A1B0GW23 586 aa12□□□□□ -0.49
HMGA2-209ENST00000539662 VPS37CA5D8V6 355 aaPredicted RBP12□□□□□ -0.49
HMGA2-209ENST00000539662 ENPP3O14638 875 aa12□□□□□ -0.49
HMGA2-209ENST00000539662 MGEA5O60502 916 aa12□□□□□ -0.49
HMGA2-209ENST00000539662 MAFO75444 373 aaPredicted RBP12□□□□□ -0.49
HMGA2-209ENST00000539662 CA3P07451 260 aa12□□□□□ -0.49
HMGA2-209ENST00000539662 SYT1P21579 422 aa12□□□□□ -0.49
HMGA2-209ENST00000539662 FGFR4P22455 802 aa12□□□□□ -0.49
HMGA2-209ENST00000539662 CDC25AP30304 524 aa12□□□□□ -0.49
HMGA2-209ENST00000539662 YWHABP31946 246 aaKnown RBP12□□□□□ -0.49
HMGA2-209ENST00000539662 TRAPPC10P48553 1259 aa12□□□□□ -0.49
HMGA2-209ENST00000539662 NLRP11P59045 1033 aaKnown RBP12□□□□□ -0.49
HMGA2-209ENST00000539662 TBC1D8BQ0IIM8 1120 aa12□□□□□ -0.49
HMGA2-209ENST00000539662 ZNF697Q5TEC3 545 aa12□□□□□ -0.49
HMGA2-209ENST00000539662 TSHZ1Q6ZSZ6 1077 aa12□□□□□ -0.49
HMGA2-209ENST00000539662 CATSPER3Q86XQ3 398 aa12□□□□□ -0.49
HMGA2-209ENST00000539662 C4orf19Q8IY42 314 aa12□□□□□ -0.49
HMGA2-209ENST00000539662 NME8Q8N427 588 aa12□□□□□ -0.49
HMGA2-209ENST00000539662 PIGOQ8TEQ8 1089 aa12□□□□□ -0.49
HMGA2-209ENST00000539662 SLC9A7Q96T83 725 aa12□□□□□ -0.49
HMGA2-209ENST00000539662 MTIF3Q9H2K0 278 aaKnown RBP12□□□□□ -0.49
HMGA2-209ENST00000539662 ZNF576Q9H609 170 aa12□□□□□ -0.49
HMGA2-209ENST00000539662 CERS4Q9HA82 394 aa12□□□□□ -0.49
HMGA2-209ENST00000539662 CYP26B1Q9NR63 512 aa12□□□□□ -0.49
HMGA2-209ENST00000539662 NOL7Q9UMY1 257 aaKnown RBP12□□□□□ -0.49
HMGA2-209ENST00000539662 CEP131Q9UPN4 1083 aa12□□□□□ -0.49
HMGA2-209ENST00000539662 AKT3Q9Y243 479 aa12□□□□□ -0.49
HMGA2-209ENST00000539662 KDM3AQ9Y4C1 1321 aa12□□□□□ -0.49
HMGA2-209ENST00000539662 TRANK1O15050 2925 aa11.99□□□□□ -0.49
HMGA2-209ENST00000539662 EPOPA6NHQ4 379 aa11.99□□□□□ -0.49
HMGA2-209ENST00000539662 RFXAPO00287 272 aa11.99□□□□□ -0.49
HMGA2-209ENST00000539662 MAGEB2O15479 319 aa11.99□□□□□ -0.49
HMGA2-209ENST00000539662 UPP2O95045 317 aa11.99□□□□□ -0.49
HMGA2-209ENST00000539662 KCNJ6P48051 423 aa11.99□□□□□ -0.49
HMGA2-209ENST00000539662 GPC3P51654 580 aa11.99□□□□□ -0.49
HMGA2-209ENST00000539662 FAM228AQ86W67 206 aa11.99□□□□□ -0.49
HMGA2-209ENST00000539662 MYOCDQ8IZQ8 938 aa11.99□□□□□ -0.49
HMGA2-209ENST00000539662 SPRYD3Q8NCJ5 442 aa11.99□□□□□ -0.49
HMGA2-209ENST00000539662 PHOSPHO2Q8TCD6 241 aa11.99□□□□□ -0.49
HMGA2-209ENST00000539662 MYLIPQ8WY64 445 aa11.99□□□□□ -0.49
HMGA2-209ENST00000539662 TMEM143Q96AN5 459 aa11.99□□□□□ -0.49
HMGA2-209ENST00000539662 CEP170P1Q96L14 293 aa11.99□□□□□ -0.49
HMGA2-209ENST00000539662 CDX2Q99626 313 aaPredicted RBP11.99□□□□□ -0.49
HMGA2-209ENST00000539662 ZSWIM4Q9H7M6 989 aa11.99□□□□□ -0.49
HMGA2-209ENST00000539662 ERVK-5Q9HDB9 667 aa11.99□□□□□ -0.49
HMGA2-209ENST00000539662 XPNPEP1Q9NQW7 623 aa11.99□□□□□ -0.49
HMGA2-209ENST00000539662 ST3GAL5Q9UNP4 418 aa11.99□□□□□ -0.49
HMGA2-209ENST00000539662 KIF3AQ9Y496 699 aa11.99□□□□□ -0.49
HMGA2-209ENST00000539662 PCDHA11Q9Y5I1 949 aa11.99□□□□□ -0.49
HMGA2-209ENST00000539662 REV3LO60673 3130 aa11.99□□□□□ -0.49
HMGA2-209ENST00000539662 GJB5O95377 273 aa11.98□□□□□ -0.49
HMGA2-209ENST00000539662 CRYBB1P53674 252 aaPredicted RBP11.98□□□□□ -0.49
HMGA2-209ENST00000539662 GRIN1Q05586 938 aa11.98□□□□□ -0.49
HMGA2-209ENST00000539662 NFX1Q12986 1120 aaKnown RBP11.98□□□□□ -0.49
HMGA2-209ENST00000539662 RESTQ13127 1097 aa11.98□□□□□ -0.49
HMGA2-209ENST00000539662 ORC2Q13416 577 aaPredicted RBP11.98□□□□□ -0.49
HMGA2-209ENST00000539662 XKR9Q5GH70 373 aa11.98□□□□□ -0.49
HMGA2-209ENST00000539662 POTEGQ6S5H5 508 aa11.98□□□□□ -0.49
HMGA2-209ENST00000539662 INTS4Q96HW7 963 aaKnown RBP11.98□□□□□ -0.49
HMGA2-209ENST00000539662 MMTAG2Q9BU76 263 aaKnown RBP11.98□□□□□ -0.49
HMGA2-209ENST00000539662 PRDM12Q9H4Q4 367 aa11.98□□□□□ -0.49
HMGA2-209ENST00000539662 DHX33Q9H6R0 707 aaKnown RBP11.98□□□□□ -0.49
HMGA2-209ENST00000539662 POLD4Q9HCU8 107 aa11.98□□□□□ -0.49
HMGA2-209ENST00000539662 SUCLA2Q9P2R7 463 aaPredicted RBP11.98□□□□□ -0.49
HMGA2-209ENST00000539662 MSRAQ9UJ68 235 aa11.98□□□□□ -0.49
HMGA2-209ENST00000539662 MTMR6Q9Y217 621 aa11.98□□□□□ -0.49
HMGA2-209ENST00000539662 TTC3P53804 2025 aa11.98□□□□□ -0.49
HMGA2-209ENST00000539662 MYO9BQ13459 2157 aa11.97□□□□□ -0.49
HMGA2-209ENST00000539662 A0A087WZ62 844 aa11.97□□□□□ -0.49
HMGA2-209ENST00000539662 M0QZ92 97 aa11.97□□□□□ -0.49
HMGA2-209ENST00000539662 TLL1O43897 1013 aa11.97□□□□□ -0.49
HMGA2-209ENST00000539662 RPS6KA5O75582 802 aa11.97□□□□□ -0.49
HMGA2-209ENST00000539662 LYPLA2O95372 231 aa11.97□□□□□ -0.49
HMGA2-209ENST00000539662 IBSPP21815 317 aaPredicted RBP11.97□□□□□ -0.49
HMGA2-209ENST00000539662 RARRES1P49788 294 aa11.97□□□□□ -0.49
HMGA2-209ENST00000539662 GATMP50440 423 aa11.97□□□□□ -0.49
HMGA2-209ENST00000539662 FXR2P51116 673 aaKnown RBP eCLIP11.97□□□□□ -0.49
HMGA2-209ENST00000539662 ATP2C1P98194 919 aaPredicted RBP11.97□□□□□ -0.49
HMGA2-209ENST00000539662 TAP1Q03518 808 aa11.97□□□□□ -0.49
HMGA2-209ENST00000539662 PAK2Q13177 524 aa11.97□□□□□ -0.49
HMGA2-209ENST00000539662 RAB30Q15771 203 aa11.97□□□□□ -0.49
HMGA2-209ENST00000539662 RILPL1Q5EBL4 403 aa11.97□□□□□ -0.49
HMGA2-209ENST00000539662 RHPN2Q8IUC4 686 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms