RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 CCNL1Q9UK58 526 aaPredicted RBP10.52□□□□□ -0.72
CDH13-204ENST00000539548 SUGT1Q9Y2Z0 365 aa10.52□□□□□ -0.72
CDH13-204ENST00000539548 UTP11Q9Y3A2 253 aaKnown RBP10.52□□□□□ -0.72
CDH13-204ENST00000539548 PCDHA1Q9Y5I3 950 aa10.52□□□□□ -0.72
CDH13-204ENST00000539548 ASTN1O14525 1302 aa10.52□□□□□ -0.73
CDH13-204ENST00000539548 NCANO14594 1321 aa10.52□□□□□ -0.73
CDH13-204ENST00000539548 F8VZ95 297 aa10.52□□□□□ -0.73
CDH13-204ENST00000539548 PPFIA2O75334 1257 aa10.52□□□□□ -0.73
CDH13-204ENST00000539548 CASP4P49662 377 aa10.52□□□□□ -0.73
CDH13-204ENST00000539548 EIF3BP55884 814 aaKnown RBP10.52□□□□□ -0.73
CDH13-204ENST00000539548 GSCP56915 257 aaPredicted RBP10.52□□□□□ -0.73
CDH13-204ENST00000539548 IRX3P78415 501 aaPredicted RBP10.52□□□□□ -0.73
CDH13-204ENST00000539548 DHX9Q08211 1270 aaKnown RBP10.52□□□□□ -0.73
CDH13-204ENST00000539548 FAM98CQ17RN3 349 aaKnown RBP10.52□□□□□ -0.73
CDH13-204ENST00000539548 ODF2Q5BJF6 829 aa10.52□□□□□ -0.73
CDH13-204ENST00000539548 DCAF17Q5H9S7 520 aaPredicted RBP10.52□□□□□ -0.73
CDH13-204ENST00000539548 TCERG1LQ5VWI1 586 aa10.52□□□□□ -0.73
CDH13-204ENST00000539548 PRR5LQ6MZQ0 368 aa10.52□□□□□ -0.73
CDH13-204ENST00000539548 CCDC121Q6ZUS5 278 aa10.52□□□□□ -0.73
CDH13-204ENST00000539548 ARMC9Q7Z3E5 817 aa10.52□□□□□ -0.73
CDH13-204ENST00000539548 KCTD17Q8N5Z5 321 aa10.52□□□□□ -0.73
CDH13-204ENST00000539548 OLIG1Q8TAK6 271 aa10.52□□□□□ -0.73
CDH13-204ENST00000539548 RAPGEF5Q92565 580 aa10.52□□□□□ -0.73
CDH13-204ENST00000539548 RBM17Q96I25 401 aaKnown RBP10.52□□□□□ -0.73
CDH13-204ENST00000539548 FAM20AQ96MK3 541 aa10.52□□□□□ -0.73
CDH13-204ENST00000539548 GCNT4Q9P109 453 aa10.52□□□□□ -0.73
CDH13-204ENST00000539548 BCCIPQ9P287 314 aaKnown RBP eCLIP10.52□□□□□ -0.73
CDH13-204ENST00000539548 POLLQ9UGP5 575 aa10.52□□□□□ -0.73
CDH13-204ENST00000539548 NOVA2Q9UNW9 492 aaKnown RBP10.52□□□□□ -0.73
CDH13-204ENST00000539548 MEIS1O00470 390 aa10.51□□□□□ -0.73
CDH13-204ENST00000539548 MEIS2O14770 477 aa10.51□□□□□ -0.73
CDH13-204ENST00000539548 RASSF9O75901 435 aa10.51□□□□□ -0.73
CDH13-204ENST00000539548 TMEM253P0C7T8 217 aa10.51□□□□□ -0.73
CDH13-204ENST00000539548 LMNB1P20700 586 aa10.51□□□□□ -0.73
CDH13-204ENST00000539548 TMOD1P28289 359 aa10.51□□□□□ -0.73
CDH13-204ENST00000539548 ARHGAP4P98171 946 aa10.51□□□□□ -0.73
CDH13-204ENST00000539548 PPATQ06203 517 aa10.51□□□□□ -0.73
CDH13-204ENST00000539548 NFIL3Q16649 462 aa10.51□□□□□ -0.73
CDH13-204ENST00000539548 PTPROQ16827 1216 aa10.51□□□□□ -0.73
CDH13-204ENST00000539548 CCDC13Q8IYE1 715 aa10.51□□□□□ -0.73
CDH13-204ENST00000539548 LNX1Q8TBB1 728 aaPredicted RBP10.51□□□□□ -0.73
CDH13-204ENST00000539548 MKL1Q969V6 931 aa10.51□□□□□ -0.73
CDH13-204ENST00000539548 CENPTQ96BT3 561 aa10.51□□□□□ -0.73
CDH13-204ENST00000539548 TLCD1Q96CP7 247 aa10.51□□□□□ -0.73
CDH13-204ENST00000539548 CCDC17Q96LX7 622 aa10.51□□□□□ -0.73
CDH13-204ENST00000539548 C8orf37Q96NL8 207 aa10.51□□□□□ -0.73
CDH13-204ENST00000539548 RAB17Q9H0T7 212 aa10.51□□□□□ -0.73
CDH13-204ENST00000539548 DDX3YO15523 660 aaKnown RBP10.5□□□□□ -0.73
CDH13-204ENST00000539548 EVI5O60447 810 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 BUB1BO60566 1050 aaPredicted RBP10.5□□□□□ -0.73
CDH13-204ENST00000539548 GAP43P17677 238 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 SOX5P35711 763 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 PTENP60484 403 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 MAGOHP61326 146 aaKnown RBP10.5□□□□□ -0.73
CDH13-204ENST00000539548 GTF2IP78347 998 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 CLUL1Q15846 466 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 KRT71Q3SY84 523 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 PRR16Q569H4 304 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 GJB7Q6PEY0 223 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 SLC35G2Q8TBE7 412 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 DCAF4Q8WV16 495 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 RFFLQ8WZ73 363 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 MAGOHBQ96A72 148 aaKnown RBP10.5□□□□□ -0.73
CDH13-204ENST00000539548 LENG9Q96B70 501 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 SEC16BQ96JE7 1060 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 SYT11Q9BT88 431 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 POLR3CQ9BUI4 534 aaPredicted RBP10.5□□□□□ -0.73
CDH13-204ENST00000539548 STK33Q9BYT3 514 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 CELF4Q9BZC1 486 aaKnown RBP10.5□□□□□ -0.73
CDH13-204ENST00000539548 QTRT2Q9H974 415 aaKnown RBP10.5□□□□□ -0.73
CDH13-204ENST00000539548 CNOT10Q9H9A5 744 aaKnown RBP10.5□□□□□ -0.73
CDH13-204ENST00000539548 OLFML3Q9NRN5 406 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 KLC4Q9NSK0 619 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 QSER1Q2KHR3 1735 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 RSPH10B2B2RC85 870 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 MPHOSPH10O00566 681 aaKnown RBP10.5□□□□□ -0.73
CDH13-204ENST00000539548 CLIC2O15247 247 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 TGFB1I1O43294 461 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 EYA4O95677 639 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 FOSP01100 380 aaPredicted RBP10.5□□□□□ -0.73
CDH13-204ENST00000539548 FGGP02679 453 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 RSPH10BP0C881 870 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 PSMC2P35998 433 aaKnown RBP10.5□□□□□ -0.73
CDH13-204ENST00000539548 CDR1P51861 262 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 PLS1Q14651 629 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 QPCTQ16769 361 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 LACTB2Q53H82 288 aaPredicted RBP10.5□□□□□ -0.73
CDH13-204ENST00000539548 DUPD1Q68J44 220 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 ATP8B4Q8TF62 1192 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 P3H4Q92791 437 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 TATDN2Q93075 761 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 MYCBPQ99417 103 aaPredicted RBP10.5□□□□□ -0.73
CDH13-204ENST00000539548 NAP1L3Q99457 506 aaPredicted RBP10.5□□□□□ -0.73
CDH13-204ENST00000539548 PSMD1Q99460 953 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 P2RX7Q99572 595 aaKnown RBP10.5□□□□□ -0.73
CDH13-204ENST00000539548 DPH5Q9H2P9 285 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 USP40Q9NVE5 1235 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 PPP1R9AQ9ULJ8 1098 aa10.5□□□□□ -0.73
CDH13-204ENST00000539548 GOLGA6L7A0A1B0GV03 622 aa10.49□□□□□ -0.73
CDH13-204ENST00000539548 FAM187AA6NFU0 413 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms