RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 CDHR5Q9HBB8 845 aa13.82□□□□□ -0.2
YBX3-207ENST00000539204 IGSF9Q9P2J2 1179 aa13.82□□□□□ -0.2
YBX3-207ENST00000539204 CFAP47Q6ZTR5 3102 aa13.82□□□□□ -0.2
YBX3-207ENST00000539204 MAFGO15525 162 aa13.81□□□□□ -0.2
YBX3-207ENST00000539204 CFHP08603 1231 aa13.81□□□□□ -0.2
YBX3-207ENST00000539204 PLCB4Q15147 1175 aa13.81□□□□□ -0.2
YBX3-207ENST00000539204 SPECC1Q5M775 1068 aa13.81□□□□□ -0.2
YBX3-207ENST00000539204 USP17L6PQ6QN14 398 aa13.81□□□□□ -0.2
YBX3-207ENST00000539204 CCDC149Q6ZUS6 474 aa13.81□□□□□ -0.2
YBX3-207ENST00000539204 PLPPR4Q7Z2D5 763 aa13.81□□□□□ -0.2
YBX3-207ENST00000539204 CABP7Q86V35 215 aa13.81□□□□□ -0.2
YBX3-207ENST00000539204 C1orf210Q8IVY1 113 aa13.81□□□□□ -0.2
YBX3-207ENST00000539204 LRRC43Q8N309 656 aa13.81□□□□□ -0.2
YBX3-207ENST00000539204 PCYT2Q99447 389 aa13.81□□□□□ -0.2
YBX3-207ENST00000539204 PKD2L1Q9P0L9 805 aa13.81□□□□□ -0.2
YBX3-207ENST00000539204 ZBTB47Q9UFB7 747 aaPredicted RBP13.81□□□□□ -0.2
YBX3-207ENST00000539204 KRBA1A5PL33 1030 aa13.8□□□□□ -0.2
YBX3-207ENST00000539204 SPDYE4A6NLX3 237 aa13.8□□□□□ -0.2
YBX3-207ENST00000539204 NARSO43776 548 aaKnown RBP13.8□□□□□ -0.2
YBX3-207ENST00000539204 EPCAMP16422 314 aa13.8□□□□□ -0.2
YBX3-207ENST00000539204 KLRC1P26715 233 aa13.8□□□□□ -0.2
YBX3-207ENST00000539204 ALDH7A1P49419 539 aaKnown RBP13.8□□□□□ -0.2
YBX3-207ENST00000539204 STAT5BP51692 787 aa13.8□□□□□ -0.2
YBX3-207ENST00000539204 GIT2Q14161 759 aa13.8□□□□□ -0.2
YBX3-207ENST00000539204 NONOQ15233 471 aaKnown RBP eCLIP13.8□□□□□ -0.2
YBX3-207ENST00000539204 C20orf194Q5TEA3 1177 aa13.8□□□□□ -0.2
YBX3-207ENST00000539204 GPR149Q86SP6 731 aa13.8□□□□□ -0.2
YBX3-207ENST00000539204 SLC39A11Q8N1S5 342 aa13.8□□□□□ -0.2
YBX3-207ENST00000539204 SUMF1Q8NBK3 374 aa13.8□□□□□ -0.2
YBX3-207ENST00000539204 TMEM40Q8WWA1 233 aa13.8□□□□□ -0.2
YBX3-207ENST00000539204 BORCS6Q96GS4 357 aa13.8□□□□□ -0.2
YBX3-207ENST00000539204 CHAMP1Q96JM3 812 aa13.8□□□□□ -0.2
YBX3-207ENST00000539204 SIT1Q9Y3P8 196 aa13.8□□□□□ -0.2
YBX3-207ENST00000539204 CHD8Q9HCK8 2581 aa13.8□□□□□ -0.2
YBX3-207ENST00000539204 CHD6Q8TD26 2715 aa13.8□□□□□ -0.2
YBX3-207ENST00000539204 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.79□□□□□ -0.2
YBX3-207ENST00000539204 PRR5-ARHGAP8B1AHC4 643 aa13.79□□□□□ -0.2
YBX3-207ENST00000539204 CYTH3O43739 400 aa13.79□□□□□ -0.2
YBX3-207ENST00000539204 KINO60870 393 aaKnown RBP13.79□□□□□ -0.2
YBX3-207ENST00000539204 DCNP07585 359 aaKnown RBP13.79□□□□□ -0.2
YBX3-207ENST00000539204 ITGB5P18084 799 aa13.79□□□□□ -0.2
YBX3-207ENST00000539204 ARHGAP8P85298 464 aa13.79□□□□□ -0.2
YBX3-207ENST00000539204 MTMR1Q13613 665 aa13.79□□□□□ -0.2
YBX3-207ENST00000539204 SLC35G1Q2M3R5 365 aa13.79□□□□□ -0.2
YBX3-207ENST00000539204 VARS2Q5ST30 1063 aaKnown RBP13.79□□□□□ -0.2
YBX3-207ENST00000539204 KIAA0319LQ8IZA0 1049 aa13.79□□□□□ -0.2
YBX3-207ENST00000539204 VPS52Q8N1B4 723 aa13.79□□□□□ -0.2
YBX3-207ENST00000539204 TMEM169Q96HH4 297 aa13.79□□□□□ -0.2
YBX3-207ENST00000539204 CNNM2Q9H8M5 875 aa13.79□□□□□ -0.2
YBX3-207ENST00000539204 TBC1D17Q9HA65 648 aa13.79□□□□□ -0.2
YBX3-207ENST00000539204 JPH1Q9HDC5 661 aaPredicted RBP13.79□□□□□ -0.2
YBX3-207ENST00000539204 NCDNQ9UBB6 729 aa13.79□□□□□ -0.2
YBX3-207ENST00000539204 CA14Q9ULX7 337 aa13.79□□□□□ -0.2
YBX3-207ENST00000539204 LOXHD1Q8IVV2 1947 aa13.78□□□□□ -0.2
YBX3-207ENST00000539204 NT5C1B-RDH14C9J2C7 533 aa13.78□□□□□ -0.2
YBX3-207ENST00000539204 PIK3CDO00329 1044 aa13.78□□□□□ -0.2
YBX3-207ENST00000539204 MEIS2O14770 477 aa13.78□□□□□ -0.2
YBX3-207ENST00000539204 ZSCAN20P17040 1043 aaPredicted RBP13.78□□□□□ -0.2
YBX3-207ENST00000539204 CRYBB1P53674 252 aaPredicted RBP13.78□□□□□ -0.2
YBX3-207ENST00000539204 GRM4Q14833 912 aa13.78□□□□□ -0.2
YBX3-207ENST00000539204 IMMTQ16891 758 aaKnown RBP13.78□□□□□ -0.2
YBX3-207ENST00000539204 LETM2Q2VYF4 491 aa13.78□□□□□ -0.2
YBX3-207ENST00000539204 PPFIBP1Q86W92 1011 aa13.78□□□□□ -0.2
YBX3-207ENST00000539204 SLC22A17Q8WUG5 538 aa13.78□□□□□ -0.2
YBX3-207ENST00000539204 PIBF1Q8WXW3 757 aa13.78□□□□□ -0.2
YBX3-207ENST00000539204 SFXN1Q9H9B4 322 aa13.78□□□□□ -0.2
YBX3-207ENST00000539204 SLC9A2Q9UBY0 812 aa13.78□□□□□ -0.2
YBX3-207ENST00000539204 IRAK3Q9Y616 596 aa13.78□□□□□ -0.2
YBX3-207ENST00000539204 METAP2P50579 478 aaKnown RBP eCLIP13.77□□□□□ -0.21
YBX3-207ENST00000539204 DSC3Q14574 896 aa13.77□□□□□ -0.21
YBX3-207ENST00000539204 SEC23AQ15436 765 aa13.77□□□□□ -0.21
YBX3-207ENST00000539204 KIZQ2M2Z5 673 aa13.77□□□□□ -0.21
YBX3-207ENST00000539204 PHLDB3Q6NSJ2 640 aa13.77□□□□□ -0.21
YBX3-207ENST00000539204 FAM228AQ86W67 206 aa13.77□□□□□ -0.21
YBX3-207ENST00000539204 SLC44A3Q8N4M1 653 aa13.77□□□□□ -0.21
YBX3-207ENST00000539204 RNF169Q8NCN4 708 aa13.77□□□□□ -0.21
YBX3-207ENST00000539204 RSAD2Q8WXG1 361 aa13.77□□□□□ -0.21
YBX3-207ENST00000539204 AUTS2Q8WXX7 1259 aa13.77□□□□□ -0.21
YBX3-207ENST00000539204 SECISBP2LQ93073 1101 aaKnown RBP13.77□□□□□ -0.21
YBX3-207ENST00000539204 SALL3Q9BXA9 1300 aa13.77□□□□□ -0.21
YBX3-207ENST00000539204 JADE2Q9NQC1 790 aa13.77□□□□□ -0.21
YBX3-207ENST00000539204 RNF19AQ9NV58 838 aa13.77□□□□□ -0.21
YBX3-207ENST00000539204 BAZ2BQ9UIF8 2168 aaKnown RBP13.77□□□□□ -0.21
YBX3-207ENST00000539204 CDV3Q9UKY7 258 aaKnown RBP13.77□□□□□ -0.21
YBX3-207ENST00000539204 UBIAD1Q9Y5Z9 338 aa13.77□□□□□ -0.21
YBX3-207ENST00000539204 BAHCC1Q9P281 2608 aa13.77□□□□□ -0.21
YBX3-207ENST00000539204 MAP1BP46821 2468 aaKnown RBP13.76□□□□□ -0.21
YBX3-207ENST00000539204 DCDC2BA2VCK2 349 aa13.76□□□□□ -0.21
YBX3-207ENST00000539204 HBP1O60381 514 aa13.76□□□□□ -0.21
YBX3-207ENST00000539204 SLC26A2P50443 739 aa13.76□□□□□ -0.21
YBX3-207ENST00000539204 PDE1AP54750 535 aa13.76□□□□□ -0.21
YBX3-207ENST00000539204 BCAR1P56945 870 aa13.76□□□□□ -0.21
YBX3-207ENST00000539204 ANKRD45Q5TZF3 282 aa13.76□□□□□ -0.21
YBX3-207ENST00000539204 RILPL2Q969X0 211 aa13.76□□□□□ -0.21
YBX3-207ENST00000539204 NXPE3Q969Y0 559 aa13.76□□□□□ -0.21
YBX3-207ENST00000539204 OSMRQ99650 979 aa13.76□□□□□ -0.21
YBX3-207ENST00000539204 RTKNQ9BST9 563 aa13.76□□□□□ -0.21
YBX3-207ENST00000539204 ZBP1Q9H171 429 aa13.76□□□□□ -0.21
YBX3-207ENST00000539204 DLGAP2Q9P1A6 1054 aa13.76□□□□□ -0.21
YBX3-207ENST00000539204 GPR179Q6PRD1 2367 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms