RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 BMS1Q14692 1282 aaKnown RBP12.76□□□□□ -0.37
CLPB-208ENST00000538021 LRRC43Q8N309 656 aa12.76□□□□□ -0.37
CLPB-208ENST00000538021 CYP2W1Q8TAV3 490 aa12.76□□□□□ -0.37
CLPB-208ENST00000538021 RIN2Q8WYP3 895 aaPredicted RBP12.76□□□□□ -0.37
CLPB-208ENST00000538021 CASD1Q96PB1 797 aa12.76□□□□□ -0.37
CLPB-208ENST00000538021 DSCC1Q9BVC3 393 aa12.76□□□□□ -0.37
CLPB-208ENST00000538021 ELAC1Q9H777 363 aaKnown RBP12.76□□□□□ -0.37
CLPB-208ENST00000538021 SENP2Q9HC62 589 aa12.76□□□□□ -0.37
CLPB-208ENST00000538021 JADE2Q9NQC1 790 aa12.76□□□□□ -0.37
CLPB-208ENST00000538021 DIAPH3Q9NSV4 1193 aa12.76□□□□□ -0.37
CLPB-208ENST00000538021 SLC9A2Q9UBY0 812 aa12.76□□□□□ -0.37
CLPB-208ENST00000538021 ERICH2A1L162 156 aa12.75□□□□□ -0.37
CLPB-208ENST00000538021 HOXA2O43364 376 aa12.75□□□□□ -0.37
CLPB-208ENST00000538021 CXCL14O95715 111 aa12.75□□□□□ -0.37
CLPB-208ENST00000538021 FAM189BP81408 668 aa12.75□□□□□ -0.37
CLPB-208ENST00000538021 TRDNQ13061 729 aa12.75□□□□□ -0.37
CLPB-208ENST00000538021 TMC5Q6UXY8 1006 aa12.75□□□□□ -0.37
CLPB-208ENST00000538021 FAM43BQ6ZT52 329 aaPredicted RBP12.75□□□□□ -0.37
CLPB-208ENST00000538021 PLPPR4Q7Z2D5 763 aa12.75□□□□□ -0.37
CLPB-208ENST00000538021 FAM228AQ86W67 206 aa12.75□□□□□ -0.37
CLPB-208ENST00000538021 RNF169Q8NCN4 708 aa12.75□□□□□ -0.37
CLPB-208ENST00000538021 OSMRQ99650 979 aa12.75□□□□□ -0.37
CLPB-208ENST00000538021 DZANK1Q9NVP4 752 aa12.75□□□□□ -0.37
CLPB-208ENST00000538021 DUSP12Q9UNI6 340 aa12.75□□□□□ -0.37
CLPB-208ENST00000538021 UBIAD1Q9Y5Z9 338 aa12.75□□□□□ -0.37
CLPB-208ENST00000538021 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.74□□□□□ -0.37
CLPB-208ENST00000538021 SPDYE4A6NLX3 237 aa12.74□□□□□ -0.37
CLPB-208ENST00000538021 NT5C1B-RDH14C9J2C7 533 aa12.74□□□□□ -0.37
CLPB-208ENST00000538021 MAFGO15525 162 aa12.74□□□□□ -0.37
CLPB-208ENST00000538021 EPCAMP16422 314 aa12.74□□□□□ -0.37
CLPB-208ENST00000538021 METAP2P50579 478 aaKnown RBP eCLIP12.74□□□□□ -0.37
CLPB-208ENST00000538021 ACTR2P61160 394 aa12.74□□□□□ -0.37
CLPB-208ENST00000538021 TROAPQ12815 778 aa12.74□□□□□ -0.37
CLPB-208ENST00000538021 WTAPQ15007 396 aa12.74□□□□□ -0.37
CLPB-208ENST00000538021 KIZQ2M2Z5 673 aa12.74□□□□□ -0.37
CLPB-208ENST00000538021 OTOP3Q7RTS5 596 aa12.74□□□□□ -0.37
CLPB-208ENST00000538021 CATIPQ7Z7H3 387 aa12.74□□□□□ -0.37
CLPB-208ENST00000538021 KIAA0319LQ8IZA0 1049 aa12.74□□□□□ -0.37
CLPB-208ENST00000538021 SLC39A11Q8N1S5 342 aa12.74□□□□□ -0.37
CLPB-208ENST00000538021 DCLK2Q8N568 766 aa12.74□□□□□ -0.37
CLPB-208ENST00000538021 FEZF2Q8TBJ5 459 aa12.74□□□□□ -0.37
CLPB-208ENST00000538021 RRP36Q96EU6 259 aaKnown RBP12.74□□□□□ -0.37
CLPB-208ENST00000538021 SDF4Q9BRK5 362 aa12.74□□□□□ -0.37
CLPB-208ENST00000538021 PSTPIP2Q9H939 334 aa12.74□□□□□ -0.37
CLPB-208ENST00000538021 SEC63Q9UGP8 760 aaKnown RBP12.74□□□□□ -0.37
CLPB-208ENST00000538021 EPG5Q9HCE0 2579 aa12.74□□□□□ -0.37
CLPB-208ENST00000538021 SPDYE3A6NKU9 549 aa12.73□□□□□ -0.37
CLPB-208ENST00000538021 CFHP08603 1231 aa12.73□□□□□ -0.37
CLPB-208ENST00000538021 CRYBB1P53674 252 aaPredicted RBP12.73□□□□□ -0.37
CLPB-208ENST00000538021 UBE2SQ16763 222 aa12.73□□□□□ -0.37
CLPB-208ENST00000538021 CCDC149Q6ZUS6 474 aa12.73□□□□□ -0.37
CLPB-208ENST00000538021 CABP7Q86V35 215 aa12.73□□□□□ -0.37
CLPB-208ENST00000538021 VPS52Q8N1B4 723 aa12.73□□□□□ -0.37
CLPB-208ENST00000538021 AUTS2Q8WXX7 1259 aa12.73□□□□□ -0.37
CLPB-208ENST00000538021 RUBCNQ92622 972 aa12.73□□□□□ -0.37
CLPB-208ENST00000538021 TMEM169Q96HH4 297 aa12.73□□□□□ -0.37
CLPB-208ENST00000538021 LNPKQ9C0E8 428 aa12.73□□□□□ -0.37
CLPB-208ENST00000538021 KCNK12Q9HB15 430 aa12.73□□□□□ -0.37
CLPB-208ENST00000538021 RNF19AQ9NV58 838 aa12.73□□□□□ -0.37
CLPB-208ENST00000538021 DLL3Q9NYJ7 618 aa12.73□□□□□ -0.37
CLPB-208ENST00000538021 BACH1O14867 736 aa12.72□□□□□ -0.37
CLPB-208ENST00000538021 NARSO43776 548 aaKnown RBP12.72□□□□□ -0.37
CLPB-208ENST00000538021 HBP1O60381 514 aa12.72□□□□□ -0.37
CLPB-208ENST00000538021 VTNP04004 478 aa12.72□□□□□ -0.37
CLPB-208ENST00000538021 ZSCAN20P17040 1043 aaPredicted RBP12.72□□□□□ -0.37
CLPB-208ENST00000538021 ALDH7A1P49419 539 aaKnown RBP12.72□□□□□ -0.37
CLPB-208ENST00000538021 DSC3Q14574 896 aa12.72□□□□□ -0.37
CLPB-208ENST00000538021 RSPO4Q2I0M5 234 aaPredicted RBP12.72□□□□□ -0.37
CLPB-208ENST00000538021 SPECC1Q5M775 1068 aa12.72□□□□□ -0.37
CLPB-208ENST00000538021 ZC3H14Q6PJT7 736 aaKnown RBP12.72□□□□□ -0.37
CLPB-208ENST00000538021 METTL13Q8N6R0 699 aa12.72□□□□□ -0.37
CLPB-208ENST00000538021 KCNH7Q9NS40 1196 aa12.72□□□□□ -0.37
CLPB-208ENST00000538021 PCDHA6Q9UN73 950 aa12.72□□□□□ -0.37
CLPB-208ENST00000538021 PCDHA8Q9Y5H6 950 aa12.72□□□□□ -0.37
CLPB-208ENST00000538021 DDX39AO00148 427 aaKnown RBP12.71□□□□□ -0.37
CLPB-208ENST00000538021 HIP1O00291 1037 aa12.71□□□□□ -0.37
CLPB-208ENST00000538021 SLC26A2P50443 739 aa12.71□□□□□ -0.37
CLPB-208ENST00000538021 BCAR1P56945 870 aa12.71□□□□□ -0.37
CLPB-208ENST00000538021 SART3Q15020 963 aaKnown RBP12.71□□□□□ -0.37
CLPB-208ENST00000538021 CLLU1OSQ5K130 101 aa12.71□□□□□ -0.37
CLPB-208ENST00000538021 GPR149Q86SP6 731 aa12.71□□□□□ -0.37
CLPB-208ENST00000538021 ECHDC2Q86YB7 292 aa12.71□□□□□ -0.37
CLPB-208ENST00000538021 CTCFLQ8NI51 663 aaPredicted RBP12.71□□□□□ -0.37
CLPB-208ENST00000538021 HELQQ8TDG4 1101 aa12.71□□□□□ -0.37
CLPB-208ENST00000538021 MXRA8Q9BRK3 442 aa12.71□□□□□ -0.37
CLPB-208ENST00000538021 SPZ1Q9BXG8 430 aa12.71□□□□□ -0.37
CLPB-208ENST00000538021 SFXN1Q9H9B4 322 aa12.71□□□□□ -0.37
CLPB-208ENST00000538021 CA14Q9ULX7 337 aa12.71□□□□□ -0.37
CLPB-208ENST00000538021 TPRP12270 2363 aaKnown RBP12.71□□□□□ -0.38
CLPB-208ENST00000538021 NFASCO94856 1347 aa12.7□□□□□ -0.38
CLPB-208ENST00000538021 KRBA1A5PL33 1030 aa12.7□□□□□ -0.38
CLPB-208ENST00000538021 DCNP07585 359 aaKnown RBP12.7□□□□□ -0.38
CLPB-208ENST00000538021 GIT2Q14161 759 aa12.7□□□□□ -0.38
CLPB-208ENST00000538021 ZNF484Q5JVG2 852 aa12.7□□□□□ -0.38
CLPB-208ENST00000538021 FAM160B1Q5W0V3 765 aa12.7□□□□□ -0.38
CLPB-208ENST00000538021 TRMT1LQ7Z2T5 733 aaKnown RBP12.7□□□□□ -0.38
CLPB-208ENST00000538021 RALYLQ86SE5 291 aaKnown RBP12.7□□□□□ -0.38
CLPB-208ENST00000538021 SLC22A17Q8WUG5 538 aa12.7□□□□□ -0.38
CLPB-208ENST00000538021 MYL10Q9BUA6 226 aa12.7□□□□□ -0.38
CLPB-208ENST00000538021 ZBP1Q9H171 429 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms