RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 SRGAP2O75044 1071 aa17.15■□□□□ 0.34
MKS1-204ENST00000537529 RHOXF2BP0C7M4 288 aa17.15■□□□□ 0.34
MKS1-204ENST00000537529 MAPTP10636 758 aaKnown RBP17.15■□□□□ 0.34
MKS1-204ENST00000537529 MYCLP12524 364 aaPredicted RBP17.15■□□□□ 0.34
MKS1-204ENST00000537529 XRRA1Q6P2D8 792 aa17.15■□□□□ 0.34
MKS1-204ENST00000537529 NSMFQ6X4W1 530 aa17.15■□□□□ 0.34
MKS1-204ENST00000537529 HNRNPLLQ8WVV9 542 aaKnown RBP17.15■□□□□ 0.34
MKS1-204ENST00000537529 CCDC43Q96MW1 224 aaKnown RBP17.15■□□□□ 0.34
MKS1-204ENST00000537529 WRNIP1Q96S55 665 aa17.15■□□□□ 0.34
MKS1-204ENST00000537529 RMDN3Q96TC7 470 aa17.15■□□□□ 0.34
MKS1-204ENST00000537529 RHOXF2Q9BQY4 288 aa17.15■□□□□ 0.34
MKS1-204ENST00000537529 PDCD2LQ9BRP1 358 aa17.15■□□□□ 0.34
MKS1-204ENST00000537529 PXMP2Q9NR77 195 aa17.15■□□□□ 0.34
MKS1-204ENST00000537529 RNF146Q9NTX7 359 aa17.15■□□□□ 0.34
MKS1-204ENST00000537529 GCNT4Q9P109 453 aa17.15■□□□□ 0.34
MKS1-204ENST00000537529 SNX12Q9UMY4 172 aa17.15■□□□□ 0.34
MKS1-204ENST00000537529 FRMD4BQ9Y2L6 1034 aa17.15■□□□□ 0.34
MKS1-204ENST00000537529 PTPRAP18433 802 aa17.14■□□□□ 0.33
MKS1-204ENST00000537529 JAK3P52333 1124 aa17.14■□□□□ 0.33
MKS1-204ENST00000537529 ARID5AQ03989 594 aa17.14■□□□□ 0.33
MKS1-204ENST00000537529 ARHGEF16Q5VV41 709 aa17.14■□□□□ 0.33
MKS1-204ENST00000537529 SYCP3Q8IZU3 236 aa17.14■□□□□ 0.33
MKS1-204ENST00000537529 NOA1Q8NC60 698 aaKnown RBP17.14■□□□□ 0.33
MKS1-204ENST00000537529 CAPZA3Q96KX2 299 aa17.14■□□□□ 0.33
MKS1-204ENST00000537529 PNKPQ96T60 521 aa17.14■□□□□ 0.33
MKS1-204ENST00000537529 MMS19Q96T76 1030 aa17.14■□□□□ 0.33
MKS1-204ENST00000537529 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.14■□□□□ 0.33
MKS1-204ENST00000537529 TIPINQ9BVW5 301 aa17.14■□□□□ 0.33
MKS1-204ENST00000537529 STRA6Q9BX79 667 aa17.14■□□□□ 0.33
MKS1-204ENST00000537529 DMAC2Q9NW81 257 aa17.14■□□□□ 0.33
MKS1-204ENST00000537529 LARSQ9P2J5 1176 aaKnown RBP17.14■□□□□ 0.33
MKS1-204ENST00000537529 ZNF541Q9H0D2 1346 aa17.14■□□□□ 0.33
MKS1-204ENST00000537529 K7ENM7 598 aa17.14■□□□□ 0.33
MKS1-204ENST00000537529 PPP1R37O75864 691 aa17.14■□□□□ 0.33
MKS1-204ENST00000537529 TBC1D8O95759 1140 aa17.14■□□□□ 0.33
MKS1-204ENST00000537529 PRLRP16471 622 aa17.14■□□□□ 0.33
MKS1-204ENST00000537529 MYBPC2Q14324 1141 aa17.14■□□□□ 0.33
MKS1-204ENST00000537529 ANGEL2Q5VTE6 544 aaKnown RBP17.14■□□□□ 0.33
MKS1-204ENST00000537529 KSR1Q8IVT5 923 aa17.14■□□□□ 0.33
MKS1-204ENST00000537529 DAW1Q8N136 415 aa17.14■□□□□ 0.33
MKS1-204ENST00000537529 C12orf42Q96LP6 360 aa17.14■□□□□ 0.33
MKS1-204ENST00000537529 ANXA13P27216 316 aa17.13■□□□□ 0.33
MKS1-204ENST00000537529 CCND2P30279 289 aa17.13■□□□□ 0.33
MKS1-204ENST00000537529 SFNP31947 248 aa17.13■□□□□ 0.33
MKS1-204ENST00000537529 RARRES1P49788 294 aa17.13■□□□□ 0.33
MKS1-204ENST00000537529 CYP2J2P51589 502 aa17.13■□□□□ 0.33
MKS1-204ENST00000537529 OAZ1P54368 228 aa17.13■□□□□ 0.33
MKS1-204ENST00000537529 KRT76Q01546 638 aa17.13■□□□□ 0.33
MKS1-204ENST00000537529 COG2Q14746 738 aa17.13■□□□□ 0.33
MKS1-204ENST00000537529 PPP2R5AQ15172 486 aa17.13■□□□□ 0.33
MKS1-204ENST00000537529 LONRF2Q1L5Z9 754 aa17.13■□□□□ 0.33
MKS1-204ENST00000537529 C10orf76Q5T2E6 689 aa17.13■□□□□ 0.33
MKS1-204ENST00000537529 SLC9A9Q8IVB4 645 aa17.13■□□□□ 0.33
MKS1-204ENST00000537529 SIX2Q9NPC8 291 aa17.13■□□□□ 0.33
MKS1-204ENST00000537529 HYOU1Q9Y4L1 999 aa17.13■□□□□ 0.33
MKS1-204ENST00000537529 WDR64B1ANS9 1081 aa17.12■□□□□ 0.33
MKS1-204ENST00000537529 TCP1P17987 556 aaKnown RBP17.12■□□□□ 0.33
MKS1-204ENST00000537529 GABPB1Q06547 395 aaPredicted RBP17.12■□□□□ 0.33
MKS1-204ENST00000537529 ZKSCAN4Q969J2 545 aaPredicted RBP17.12■□□□□ 0.33
MKS1-204ENST00000537529 DRC1Q96MC2 740 aa17.12■□□□□ 0.33
MKS1-204ENST00000537529 IKZF4Q9H2S9 585 aa17.12■□□□□ 0.33
MKS1-204ENST00000537529 TMEM206Q9H813 350 aa17.12■□□□□ 0.33
MKS1-204ENST00000537529 TSKSQ9UJT2 592 aa17.12■□□□□ 0.33
MKS1-204ENST00000537529 A0A087X0T9 212 aa17.12■□□□□ 0.33
MKS1-204ENST00000537529 C19orf81C9J6K1 198 aa17.12■□□□□ 0.33
MKS1-204ENST00000537529 FAM228BP0C875 321 aa17.12■□□□□ 0.33
MKS1-204ENST00000537529 PLS3P13797 630 aa17.12■□□□□ 0.33
MKS1-204ENST00000537529 MCM3P25205 808 aa17.12■□□□□ 0.33
MKS1-204ENST00000537529 YWHABP31946 246 aaKnown RBP17.12■□□□□ 0.33
MKS1-204ENST00000537529 NAP1L1P55209 391 aaKnown RBP17.12■□□□□ 0.33
MKS1-204ENST00000537529 PSMC5P62195 406 aa17.12■□□□□ 0.33
MKS1-204ENST00000537529 NAB2Q15742 525 aa17.12■□□□□ 0.33
MKS1-204ENST00000537529 ENOX2Q16206 610 aaKnown RBP17.12■□□□□ 0.33
MKS1-204ENST00000537529 IRF2BP2Q7Z5L9 587 aa17.12■□□□□ 0.33
MKS1-204ENST00000537529 C4orf19Q8IY42 314 aa17.12■□□□□ 0.33
MKS1-204ENST00000537529 ANKRD13CQ8N6S4 541 aa17.12■□□□□ 0.33
MKS1-204ENST00000537529 RDM1Q8NG50 284 aa17.12■□□□□ 0.33
MKS1-204ENST00000537529 TESPA1A2RU30 521 aaPredicted RBP17.11■□□□□ 0.33
MKS1-204ENST00000537529 PRKCIP41743 596 aa17.11■□□□□ 0.33
MKS1-204ENST00000537529 FMO5P49326 533 aa17.11■□□□□ 0.33
MKS1-204ENST00000537529 JAM2P57087 298 aa17.11■□□□□ 0.33
MKS1-204ENST00000537529 BAATQ14032 418 aaPredicted RBP17.11■□□□□ 0.33
MKS1-204ENST00000537529 SNRNP48Q6IEG0 339 aaKnown RBP17.11■□□□□ 0.33
MKS1-204ENST00000537529 WDR93Q6P2C0 686 aa17.11■□□□□ 0.33
MKS1-204ENST00000537529 REPS2Q8NFH8 660 aa17.11■□□□□ 0.33
MKS1-204ENST00000537529 ACCSQ96QU6 501 aa17.11■□□□□ 0.33
MKS1-204ENST00000537529 DAAM1Q9Y4D1 1078 aa17.11■□□□□ 0.33
MKS1-204ENST00000537529 PPP2R3BQ9Y5P8 575 aa17.11■□□□□ 0.33
MKS1-204ENST00000537529 ZNF185O15231 689 aa17.11■□□□□ 0.33
MKS1-204ENST00000537529 EXOC3O60645 756 aa17.11■□□□□ 0.33
MKS1-204ENST00000537529 DSG3P32926 999 aa17.11■□□□□ 0.33
MKS1-204ENST00000537529 PLA2G4AP47712 749 aa17.11■□□□□ 0.33
MKS1-204ENST00000537529 HMGCS2P54868 508 aa17.11■□□□□ 0.33
MKS1-204ENST00000537529 PTK2Q05397 1052 aa17.11■□□□□ 0.33
MKS1-204ENST00000537529 MAEAQ7L5Y9 396 aa17.11■□□□□ 0.33
MKS1-204ENST00000537529 NLRX1Q86UT6 975 aa17.11■□□□□ 0.33
MKS1-204ENST00000537529 VPS36Q86VN1 386 aa17.11■□□□□ 0.33
MKS1-204ENST00000537529 GPRASP2Q96D09 838 aa17.11■□□□□ 0.33
MKS1-204ENST00000537529 WNK4Q96J92 1243 aa17.11■□□□□ 0.33
MKS1-204ENST00000537529 FUT8Q9BYC5 575 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms