RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 AMHP03971 560 aa14.77□□□□□ -0.05
PRKDC-206ENST00000536429 RPLP2P05387 115 aaKnown RBP14.77□□□□□ -0.05
PRKDC-206ENST00000536429 P4HBP07237 508 aaKnown RBP14.77□□□□□ -0.05
PRKDC-206ENST00000536429 TAP1Q03518 808 aa14.77□□□□□ -0.05
PRKDC-206ENST00000536429 TBC1D8BQ0IIM8 1120 aa14.77□□□□□ -0.05
PRKDC-206ENST00000536429 GNL2Q13823 731 aaKnown RBP14.77□□□□□ -0.05
PRKDC-206ENST00000536429 ADGRE1Q14246 886 aa14.77□□□□□ -0.05
PRKDC-206ENST00000536429 TTC38Q5R3I4 469 aa14.77□□□□□ -0.05
PRKDC-206ENST00000536429 IL27Q8NEV9 243 aa14.77□□□□□ -0.05
PRKDC-206ENST00000536429 EIF2AK1Q9BQI3 630 aaKnown RBP14.77□□□□□ -0.05
PRKDC-206ENST00000536429 ZBED2Q9BTP6 218 aa14.77□□□□□ -0.05
PRKDC-206ENST00000536429 ADAMTS10Q9H324 1103 aa14.77□□□□□ -0.05
PRKDC-206ENST00000536429 PCDHA12Q9UN75 941 aa14.77□□□□□ -0.05
PRKDC-206ENST00000536429 AKT3Q9Y243 479 aa14.77□□□□□ -0.05
PRKDC-206ENST00000536429 UNC80Q8N2C7 3258 aa14.76□□□□□ -0.05
PRKDC-206ENST00000536429 A0A087WWV3 80 aa14.76□□□□□ -0.05
PRKDC-206ENST00000536429 IGKV6-21A0A0C4DH24 114 aa14.76□□□□□ -0.05
PRKDC-206ENST00000536429 RFXAPO00287 272 aa14.76□□□□□ -0.05
PRKDC-206ENST00000536429 ENPP3O14638 875 aa14.76□□□□□ -0.05
PRKDC-206ENST00000536429 SLITRK3O94933 977 aa14.76□□□□□ -0.05
PRKDC-206ENST00000536429 UPP2O95045 317 aa14.76□□□□□ -0.05
PRKDC-206ENST00000536429 FOSL2P15408 326 aa14.76□□□□□ -0.05
PRKDC-206ENST00000536429 PAK2Q13177 524 aa14.76□□□□□ -0.05
PRKDC-206ENST00000536429 CUL4AQ13619 759 aa14.76□□□□□ -0.05
PRKDC-206ENST00000536429 FAM228AQ86W67 206 aa14.76□□□□□ -0.05
PRKDC-206ENST00000536429 C4orf32Q8N8J7 132 aa14.76□□□□□ -0.05
PRKDC-206ENST00000536429 TOP1MTQ969P6 601 aa14.76□□□□□ -0.05
PRKDC-206ENST00000536429 RAD9AQ99638 391 aa14.76□□□□□ -0.05
PRKDC-206ENST00000536429 HSD17B14Q9BPX1 270 aa14.76□□□□□ -0.05
PRKDC-206ENST00000536429 ERVK-5Q9HDB9 667 aa14.76□□□□□ -0.05
PRKDC-206ENST00000536429 BMP2KQ9NSY1 1161 aaPredicted RBP14.76□□□□□ -0.05
PRKDC-206ENST00000536429 SMC3Q9UQE7 1217 aa14.76□□□□□ -0.05
PRKDC-206ENST00000536429 SQORQ9Y6N5 450 aa14.76□□□□□ -0.05
PRKDC-206ENST00000536429 GBF1Q92538 1859 aa14.76□□□□□ -0.05
PRKDC-206ENST00000536429 MGEA5O60502 916 aa14.75□□□□□ -0.05
PRKDC-206ENST00000536429 CRYBB1P53674 252 aaPredicted RBP14.75□□□□□ -0.05
PRKDC-206ENST00000536429 NLRP11P59045 1033 aaKnown RBP14.75□□□□□ -0.05
PRKDC-206ENST00000536429 HTRA4P83105 476 aaPredicted RBP14.75□□□□□ -0.05
PRKDC-206ENST00000536429 MCTP1Q6DN14 999 aa14.75□□□□□ -0.05
PRKDC-206ENST00000536429 TPH2Q8IWU9 490 aa14.75□□□□□ -0.05
PRKDC-206ENST00000536429 C4orf19Q8IY42 314 aa14.75□□□□□ -0.05
PRKDC-206ENST00000536429 MAP7D2Q96T17 732 aa14.75□□□□□ -0.05
PRKDC-206ENST00000536429 CYP26B1Q9NR63 512 aa14.75□□□□□ -0.05
PRKDC-206ENST00000536429 PCDHB6Q9Y5E3 794 aa14.75□□□□□ -0.05
PRKDC-206ENST00000536429 MYH9P35579 1960 aaKnown RBP14.74□□□□□ -0.05
PRKDC-206ENST00000536429 MYO9BQ13459 2157 aa14.74□□□□□ -0.05
PRKDC-206ENST00000536429 LINC01553A4QN01 128 aa14.74□□□□□ -0.05
PRKDC-206ENST00000536429 MAFO75444 373 aaPredicted RBP14.74□□□□□ -0.05
PRKDC-206ENST00000536429 CSDE1O75534 798 aaKnown RBP14.74□□□□□ -0.05
PRKDC-206ENST00000536429 RPS6KA5O75582 802 aa14.74□□□□□ -0.05
PRKDC-206ENST00000536429 OR52Z1P0C646 297 aa14.74□□□□□ -0.05
PRKDC-206ENST00000536429 TMOD1P28289 359 aa14.74□□□□□ -0.05
PRKDC-206ENST00000536429 YWHABP31946 246 aaKnown RBP14.74□□□□□ -0.05
PRKDC-206ENST00000536429 TECP42680 631 aa14.74□□□□□ -0.05
PRKDC-206ENST00000536429 TRAPPC10P48553 1259 aa14.74□□□□□ -0.05
PRKDC-206ENST00000536429 GPC3P51654 580 aa14.74□□□□□ -0.05
PRKDC-206ENST00000536429 NFX1Q12986 1120 aaKnown RBP14.74□□□□□ -0.05
PRKDC-206ENST00000536429 USP38Q8NB14 1042 aa14.74□□□□□ -0.05
PRKDC-206ENST00000536429 ARNTL2Q8WYA1 636 aa14.74□□□□□ -0.05
PRKDC-206ENST00000536429 CEP170P1Q96L14 293 aa14.74□□□□□ -0.05
PRKDC-206ENST00000536429 ZSWIM4Q9H7M6 989 aa14.74□□□□□ -0.05
PRKDC-206ENST00000536429 ST3GAL5Q9UNP4 418 aa14.74□□□□□ -0.05
PRKDC-206ENST00000536429 KIF3AQ9Y496 699 aa14.74□□□□□ -0.05
PRKDC-206ENST00000536429 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.74□□□□□ -0.05
PRKDC-206ENST00000536429 MICAL3Q7RTP6 2002 aa14.74□□□□□ -0.05
PRKDC-206ENST00000536429 H3BQV1 296 aa14.73□□□□□ -0.05
PRKDC-206ENST00000536429 SPATA31C1P0DKV0 1188 aa14.73□□□□□ -0.05
PRKDC-206ENST00000536429 IBSPP21815 317 aaPredicted RBP14.73□□□□□ -0.05
PRKDC-206ENST00000536429 FGFR4P22455 802 aa14.73□□□□□ -0.05
PRKDC-206ENST00000536429 KSR1Q8IVT5 923 aa14.73□□□□□ -0.05
PRKDC-206ENST00000536429 SP7Q8TDD2 431 aaPredicted RBP14.73□□□□□ -0.05
PRKDC-206ENST00000536429 TSPYL2Q9H2G4 693 aaPredicted RBP14.73□□□□□ -0.05
PRKDC-206ENST00000536429 SUCLA2Q9P2R7 463 aaPredicted RBP14.73□□□□□ -0.05
PRKDC-206ENST00000536429 MTUS1Q9ULD2 1270 aa14.73□□□□□ -0.05
PRKDC-206ENST00000536429 NOL7Q9UMY1 257 aaKnown RBP14.73□□□□□ -0.05
PRKDC-206ENST00000536429 TRANK1O15050 2925 aa14.73□□□□□ -0.05
PRKDC-206ENST00000536429 WDR81Q562E7 1941 aa14.72□□□□□ -0.05
PRKDC-206ENST00000536429 VCANP13611 3396 aa14.72□□□□□ -0.05
PRKDC-206ENST00000536429 EVPLQ92817 2033 aa14.72□□□□□ -0.05
PRKDC-206ENST00000536429 DKC1O60832 514 aaKnown RBP eCLIP14.72□□□□□ -0.05
PRKDC-206ENST00000536429 MED24O75448 989 aa14.72□□□□□ -0.05
PRKDC-206ENST00000536429 LYPLA2O95372 231 aa14.72□□□□□ -0.05
PRKDC-206ENST00000536429 PTGDRQ13258 359 aa14.72□□□□□ -0.05
PRKDC-206ENST00000536429 ORC2Q13416 577 aaPredicted RBP14.72□□□□□ -0.05
PRKDC-206ENST00000536429 IL17AQ16552 155 aa14.72□□□□□ -0.05
PRKDC-206ENST00000536429 XKR9Q5GH70 373 aa14.72□□□□□ -0.05
PRKDC-206ENST00000536429 LARP1BQ659C4 914 aaKnown RBP14.72□□□□□ -0.05
PRKDC-206ENST00000536429 CATSPER3Q86XQ3 398 aa14.72□□□□□ -0.05
PRKDC-206ENST00000536429 CRIPAKQ8N1N5 446 aa14.72□□□□□ -0.05
PRKDC-206ENST00000536429 MAFAQ8NHW3 353 aaPredicted RBP14.72□□□□□ -0.05
PRKDC-206ENST00000536429 PIGOQ8TEQ8 1089 aa14.72□□□□□ -0.05
PRKDC-206ENST00000536429 NLRP7Q8WX94 980 aa14.72□□□□□ -0.05
PRKDC-206ENST00000536429 TMEM143Q96AN5 459 aa14.72□□□□□ -0.05
PRKDC-206ENST00000536429 YME1L1Q96TA2 773 aa14.72□□□□□ -0.05
PRKDC-206ENST00000536429 C17orf80Q9BSJ5 609 aa14.72□□□□□ -0.05
PRKDC-206ENST00000536429 FTHL17Q9BXU8 183 aa14.72□□□□□ -0.05
PRKDC-206ENST00000536429 DHX33Q9H6R0 707 aaKnown RBP14.72□□□□□ -0.05
PRKDC-206ENST00000536429 RC3H2Q9HBD1 1191 aaKnown RBP14.72□□□□□ -0.05
PRKDC-206ENST00000536429 FOXD4L1Q9NU39 408 aa14.72□□□□□ -0.05
PRKDC-206ENST00000536429 INSL6Q9Y581 213 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms