RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 ST18O60284 1047 aa16.03■□□□□ 0.16
UBE3B-206ENST00000536398 MGEA5O60502 916 aa16.03■□□□□ 0.16
UBE3B-206ENST00000536398 NPEPPSP55786 919 aa16.03■□□□□ 0.16
UBE3B-206ENST00000536398 HMGN5P82970 282 aaKnown RBP16.03■□□□□ 0.16
UBE3B-206ENST00000536398 EPHA7Q15375 998 aa16.03■□□□□ 0.16
UBE3B-206ENST00000536398 SAFBQ15424 915 aaKnown RBP eCLIP16.03■□□□□ 0.16
UBE3B-206ENST00000536398 XKR3Q5GH77 459 aa16.03■□□□□ 0.16
UBE3B-206ENST00000536398 TMX3Q96JJ7 454 aa16.03■□□□□ 0.16
UBE3B-206ENST00000536398 MTMR9Q96QG7 549 aa16.03■□□□□ 0.16
UBE3B-206ENST00000536398 ADAMTS10Q9H324 1103 aa16.03■□□□□ 0.16
UBE3B-206ENST00000536398 ERVK-5Q9HDB9 667 aa16.03■□□□□ 0.16
UBE3B-206ENST00000536398 PRDM6Q9NQX0 595 aa16.03■□□□□ 0.16
UBE3B-206ENST00000536398 ST3GAL5Q9UNP4 418 aa16.03■□□□□ 0.16
UBE3B-206ENST00000536398 SQORQ9Y6N5 450 aa16.03■□□□□ 0.16
UBE3B-206ENST00000536398 WDR81Q562E7 1941 aa16.03■□□□□ 0.16
UBE3B-206ENST00000536398 ZBTB39O15060 712 aa16.02■□□□□ 0.16
UBE3B-206ENST00000536398 NEMFO60524 1076 aa16.02■□□□□ 0.16
UBE3B-206ENST00000536398 RPS6KA5O75582 802 aa16.02■□□□□ 0.16
UBE3B-206ENST00000536398 BAG4O95429 457 aaKnown RBP16.02■□□□□ 0.16
UBE3B-206ENST00000536398 P4HBP07237 508 aaKnown RBP16.02■□□□□ 0.16
UBE3B-206ENST00000536398 TXKP42681 527 aa16.02■□□□□ 0.16
UBE3B-206ENST00000536398 QARSP47897 775 aaKnown RBP16.02■□□□□ 0.16
UBE3B-206ENST00000536398 CRYBB1P53674 252 aaPredicted RBP16.02■□□□□ 0.16
UBE3B-206ENST00000536398 NLRP11P59045 1033 aaKnown RBP16.02■□□□□ 0.16
UBE3B-206ENST00000536398 CTTNQ14247 550 aaKnown RBP16.02■□□□□ 0.16
UBE3B-206ENST00000536398 ZNF174Q15697 407 aa16.02■□□□□ 0.16
UBE3B-206ENST00000536398 CALCRLQ16602 461 aa16.02■□□□□ 0.16
UBE3B-206ENST00000536398 SLFN12Q8IYM2 578 aa16.02■□□□□ 0.16
UBE3B-206ENST00000536398 MICALL1Q8N3F8 863 aa16.02■□□□□ 0.16
UBE3B-206ENST00000536398 SP7Q8TDD2 431 aaPredicted RBP16.02■□□□□ 0.16
UBE3B-206ENST00000536398 DYDC2Q96IM9 177 aa16.02■□□□□ 0.16
UBE3B-206ENST00000536398 YME1L1Q96TA2 773 aa16.02■□□□□ 0.16
UBE3B-206ENST00000536398 C17orf80Q9BSJ5 609 aa16.02■□□□□ 0.16
UBE3B-206ENST00000536398 AKT3Q9Y243 479 aa16.02■□□□□ 0.16
UBE3B-206ENST00000536398 A0A087WWV3 80 aa16.01■□□□□ 0.15
UBE3B-206ENST00000536398 LPXNO60711 386 aa16.01■□□□□ 0.15
UBE3B-206ENST00000536398 SLITRK3O94933 977 aa16.01■□□□□ 0.15
UBE3B-206ENST00000536398 IBSPP21815 317 aaPredicted RBP16.01■□□□□ 0.15
UBE3B-206ENST00000536398 MCM7P33993 719 aa16.01■□□□□ 0.15
UBE3B-206ENST00000536398 ERVK-21P61565 698 aa16.01■□□□□ 0.15
UBE3B-206ENST00000536398 CYP4A11Q02928 519 aa16.01■□□□□ 0.15
UBE3B-206ENST00000536398 TBC1D8BQ0IIM8 1120 aa16.01■□□□□ 0.15
UBE3B-206ENST00000536398 GRB10Q13322 594 aa16.01■□□□□ 0.15
UBE3B-206ENST00000536398 FAM228AQ86W67 206 aa16.01■□□□□ 0.15
UBE3B-206ENST00000536398 GDPD5Q8WTR4 605 aa16.01■□□□□ 0.15
UBE3B-206ENST00000536398 TGS1Q96RS0 853 aaKnown RBP16.01■□□□□ 0.15
UBE3B-206ENST00000536398 LXNQ9BS40 222 aa16.01■□□□□ 0.15
UBE3B-206ENST00000536398 TSPYL2Q9H2G4 693 aaPredicted RBP16.01■□□□□ 0.15
UBE3B-206ENST00000536398 FOXP1Q9H334 677 aaPredicted RBP16.01■□□□□ 0.15
UBE3B-206ENST00000536398 TTC12Q9H892 705 aaPredicted RBP16.01■□□□□ 0.15
UBE3B-206ENST00000536398 PCDHA12Q9UN75 941 aa16.01■□□□□ 0.15
UBE3B-206ENST00000536398 MTCH2Q9Y6C9 303 aa16.01■□□□□ 0.15
UBE3B-206ENST00000536398 REV3LO60673 3130 aa16.01■□□□□ 0.15
UBE3B-206ENST00000536398 LOXHD1Q8IVV2 1947 aa16■□□□□ 0.15
UBE3B-206ENST00000536398 IGKV6-21A0A0C4DH24 114 aa16■□□□□ 0.15
UBE3B-206ENST00000536398 FGFR4P22455 802 aa16■□□□□ 0.15
UBE3B-206ENST00000536398 TMOD1P28289 359 aa16■□□□□ 0.15
UBE3B-206ENST00000536398 GPC3P51654 580 aa16■□□□□ 0.15
UBE3B-206ENST00000536398 NBR1Q14596 966 aa16■□□□□ 0.15
UBE3B-206ENST00000536398 PHF6Q8IWS0 365 aaKnown RBP eCLIP16■□□□□ 0.15
UBE3B-206ENST00000536398 TPH2Q8IWU9 490 aa16■□□□□ 0.15
UBE3B-206ENST00000536398 CRIPAKQ8N1N5 446 aa16■□□□□ 0.15
UBE3B-206ENST00000536398 MAP7D2Q96T17 732 aa16■□□□□ 0.15
UBE3B-206ENST00000536398 BACH2Q9BYV9 841 aa16■□□□□ 0.15
UBE3B-206ENST00000536398 CYP26B1Q9NR63 512 aa16■□□□□ 0.15
UBE3B-206ENST00000536398 MAFO75444 373 aaPredicted RBP15.99■□□□□ 0.15
UBE3B-206ENST00000536398 CSDE1O75534 798 aaKnown RBP15.99■□□□□ 0.15
UBE3B-206ENST00000536398 GATMP50440 423 aa15.99■□□□□ 0.15
UBE3B-206ENST00000536398 NOSTRINQ8IVI9 506 aa15.99■□□□□ 0.15
UBE3B-206ENST00000536398 KSR1Q8IVT5 923 aa15.99■□□□□ 0.15
UBE3B-206ENST00000536398 C4orf19Q8IY42 314 aa15.99■□□□□ 0.15
UBE3B-206ENST00000536398 CEP170P1Q96L14 293 aa15.99■□□□□ 0.15
UBE3B-206ENST00000536398 ADAM2Q99965 735 aa15.99■□□□□ 0.15
UBE3B-206ENST00000536398 HSD17B14Q9BPX1 270 aa15.99■□□□□ 0.15
UBE3B-206ENST00000536398 EIF2AK1Q9BQI3 630 aaKnown RBP15.99■□□□□ 0.15
UBE3B-206ENST00000536398 FTHL17Q9BXU8 183 aa15.99■□□□□ 0.15
UBE3B-206ENST00000536398 RC3H2Q9HBD1 1191 aaKnown RBP15.99■□□□□ 0.15
UBE3B-206ENST00000536398 BMP2KQ9NSY1 1161 aaPredicted RBP15.99■□□□□ 0.15
UBE3B-206ENST00000536398 GTF3C3Q9Y5Q9 886 aa15.99■□□□□ 0.15
UBE3B-206ENST00000536398 VCANP13611 3396 aa15.98■□□□□ 0.15
UBE3B-206ENST00000536398 POTEMA6NI47 508 aa15.98■□□□□ 0.15
UBE3B-206ENST00000536398 GPR182O15218 404 aa15.98■□□□□ 0.15
UBE3B-206ENST00000536398 DGKIO75912 1065 aa15.98■□□□□ 0.15
UBE3B-206ENST00000536398 EIF4BP23588 611 aaKnown RBP15.98■□□□□ 0.15
UBE3B-206ENST00000536398 YWHABP31946 246 aaKnown RBP15.98■□□□□ 0.15
UBE3B-206ENST00000536398 TOB1P50616 345 aaPredicted RBP15.98■□□□□ 0.15
UBE3B-206ENST00000536398 ZNF689Q96CS4 500 aaPredicted RBP15.98■□□□□ 0.15
UBE3B-206ENST00000536398 ZSWIM4Q9H7M6 989 aa15.98■□□□□ 0.15
UBE3B-206ENST00000536398 SUCLA2Q9P2R7 463 aaPredicted RBP15.98■□□□□ 0.15
UBE3B-206ENST00000536398 TTC3P53804 2025 aa15.97■□□□□ 0.15
UBE3B-206ENST00000536398 TRANK1O15050 2925 aa15.97■□□□□ 0.15
UBE3B-206ENST00000536398 LINC00271P0C7V0 271 aa15.97■□□□□ 0.15
UBE3B-206ENST00000536398 POU3F3P20264 500 aaPredicted RBP15.97■□□□□ 0.15
UBE3B-206ENST00000536398 U2AF2P26368 475 aaKnown RBP eCLIP15.97■□□□□ 0.15
UBE3B-206ENST00000536398 GJB2P29033 226 aa15.97■□□□□ 0.15
UBE3B-206ENST00000536398 GNL2Q13823 731 aaKnown RBP15.97■□□□□ 0.15
UBE3B-206ENST00000536398 DSC3Q14574 896 aa15.97■□□□□ 0.15
UBE3B-206ENST00000536398 PAN2Q504Q3 1202 aaKnown RBP15.97■□□□□ 0.15
UBE3B-206ENST00000536398 EPC2Q52LR7 807 aa15.97■□□□□ 0.15
UBE3B-206ENST00000536398 TTC38Q5R3I4 469 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms