RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 ASPRV1Q53RT3 343 aa9.57□□□□□ -0.88
CLIP1-206ENST00000535290 PHLDB3Q6NSJ2 640 aa9.57□□□□□ -0.88
CLIP1-206ENST00000535290 GPR149Q86SP6 731 aa9.57□□□□□ -0.88
CLIP1-206ENST00000535290 TBC1D10CQ8IV04 446 aa9.57□□□□□ -0.88
CLIP1-206ENST00000535290 SLC39A11Q8N1S5 342 aa9.57□□□□□ -0.88
CLIP1-206ENST00000535290 STAG2Q8N3U4 1231 aa9.57□□□□□ -0.88
CLIP1-206ENST00000535290 SLC44A3Q8N4M1 653 aa9.57□□□□□ -0.88
CLIP1-206ENST00000535290 SLC22A17Q8WUG5 538 aa9.57□□□□□ -0.88
CLIP1-206ENST00000535290 TRAPPC12Q8WVT3 735 aa9.57□□□□□ -0.88
CLIP1-206ENST00000535290 TMEM40Q8WWA1 233 aa9.57□□□□□ -0.88
CLIP1-206ENST00000535290 GLG1Q92896 1179 aa9.57□□□□□ -0.88
CLIP1-206ENST00000535290 SENP7Q9BQF6 1050 aa9.57□□□□□ -0.88
CLIP1-206ENST00000535290 FOXQ1Q9C009 403 aa9.57□□□□□ -0.88
CLIP1-206ENST00000535290 TMEM117Q9H0C3 514 aa9.57□□□□□ -0.88
CLIP1-206ENST00000535290 PARD6AQ9NPB6 346 aa9.57□□□□□ -0.88
CLIP1-206ENST00000535290 C1orf112Q9NSG2 853 aa9.57□□□□□ -0.88
CLIP1-206ENST00000535290 RNF19AQ9NV58 838 aa9.57□□□□□ -0.88
CLIP1-206ENST00000535290 TMEM161AQ9NX61 479 aa9.57□□□□□ -0.88
CLIP1-206ENST00000535290 USP18Q9UMW8 372 aa9.57□□□□□ -0.88
CLIP1-206ENST00000535290 GINS2Q9Y248 185 aa9.57□□□□□ -0.88
CLIP1-206ENST00000535290 KDM3AQ9Y4C1 1321 aa9.56□□□□□ -0.88
CLIP1-206ENST00000535290 RRN3P2A6NIE6 340 aa9.56□□□□□ -0.88
CLIP1-206ENST00000535290 SPTLC1O15269 473 aa9.56□□□□□ -0.88
CLIP1-206ENST00000535290 ATP9AO75110 1047 aa9.56□□□□□ -0.88
CLIP1-206ENST00000535290 STAM2O75886 525 aa9.56□□□□□ -0.88
CLIP1-206ENST00000535290 RPLP2P05387 115 aaKnown RBP9.56□□□□□ -0.88
CLIP1-206ENST00000535290 PARP1P09874 1014 aaKnown RBP9.56□□□□□ -0.88
CLIP1-206ENST00000535290 MFSD6Q6ZSS7 791 aa9.56□□□□□ -0.88
CLIP1-206ENST00000535290 CABP7Q86V35 215 aa9.56□□□□□ -0.88
CLIP1-206ENST00000535290 RASEFQ8IZ41 740 aa9.56□□□□□ -0.88
CLIP1-206ENST00000535290 SAMD3Q8N6K7 520 aa9.56□□□□□ -0.88
CLIP1-206ENST00000535290 PI4K2BQ8TCG2 481 aa9.56□□□□□ -0.88
CLIP1-206ENST00000535290 GPR152Q8TDT2 470 aa9.56□□□□□ -0.88
CLIP1-206ENST00000535290 SEPT1Q8WYJ6 367 aa9.56□□□□□ -0.88
CLIP1-206ENST00000535290 MTMR8Q96EF0 704 aa9.56□□□□□ -0.88
CLIP1-206ENST00000535290 PCYT2Q99447 389 aa9.56□□□□□ -0.88
CLIP1-206ENST00000535290 KAT14Q9H8E8 782 aa9.56□□□□□ -0.88
CLIP1-206ENST00000535290 ST3GAL5Q9UNP4 418 aa9.56□□□□□ -0.88
CLIP1-206ENST00000535290 SMG5Q9UPR3 1016 aaKnown RBP9.56□□□□□ -0.88
CLIP1-206ENST00000535290 PCDHA2Q9Y5H9 948 aa9.56□□□□□ -0.88
CLIP1-206ENST00000535290 FANCMQ8IYD8 2048 aa9.56□□□□□ -0.88
CLIP1-206ENST00000535290 NEDD4P46934 1319 aa9.56□□□□□ -0.88
CLIP1-206ENST00000535290 FRMPD4Q14CM0 1322 aa9.56□□□□□ -0.88
CLIP1-206ENST00000535290 FNDC1Q4ZHG4 1894 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-206ENST00000535290 KAT6AQ92794 2004 aa9.55□□□□□ -0.88
CLIP1-206ENST00000535290 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-206ENST00000535290 TRIM6-TRIM34B2RNG4 842 aa9.55□□□□□ -0.88
CLIP1-206ENST00000535290 NT5C1B-RDH14C9J2C7 533 aa9.55□□□□□ -0.88
CLIP1-206ENST00000535290 ZBTB5O15062 677 aa9.55□□□□□ -0.88
CLIP1-206ENST00000535290 RPS6KA5O75582 802 aa9.55□□□□□ -0.88
CLIP1-206ENST00000535290 SRFP11831 508 aa9.55□□□□□ -0.88
CLIP1-206ENST00000535290 KCNA2P16389 499 aa9.55□□□□□ -0.88
CLIP1-206ENST00000535290 DMWDQ09019 674 aa9.55□□□□□ -0.88
CLIP1-206ENST00000535290 NBR1Q14596 966 aa9.55□□□□□ -0.88
CLIP1-206ENST00000535290 PLCB4Q15147 1175 aa9.55□□□□□ -0.88
CLIP1-206ENST00000535290 SLC35G1Q2M3R5 365 aa9.55□□□□□ -0.88
CLIP1-206ENST00000535290 LETM2Q2VYF4 491 aa9.55□□□□□ -0.88
CLIP1-206ENST00000535290 ZNF528Q3MIS6 628 aa9.55□□□□□ -0.88
CLIP1-206ENST00000535290 VPS52Q8N1B4 723 aa9.55□□□□□ -0.88
CLIP1-206ENST00000535290 LRRC43Q8N309 656 aa9.55□□□□□ -0.88
CLIP1-206ENST00000535290 OTUD7AQ8TE49 926 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-206ENST00000535290 ATRIPQ8WXE1 791 aa9.55□□□□□ -0.88
CLIP1-206ENST00000535290 SMARCAD1Q9H4L7 1026 aa9.55□□□□□ -0.88
CLIP1-206ENST00000535290 ELAC1Q9H777 363 aaKnown RBP9.55□□□□□ -0.88
CLIP1-206ENST00000535290 ARHGEF3Q9NR81 526 aa9.55□□□□□ -0.88
CLIP1-206ENST00000535290 FLNBO75369 2602 aaKnown RBP9.54□□□□□ -0.88
CLIP1-206ENST00000535290 SMIM35A0A1B0GVV1 85 aa9.54□□□□□ -0.88
CLIP1-206ENST00000535290 SLC30A4O14863 429 aa9.54□□□□□ -0.88
CLIP1-206ENST00000535290 METAP2P50579 478 aaKnown RBP eCLIP9.54□□□□□ -0.88
CLIP1-206ENST00000535290 CSTF1Q05048 431 aaKnown RBP9.54□□□□□ -0.88
CLIP1-206ENST00000535290 DSC3Q14574 896 aa9.54□□□□□ -0.88
CLIP1-206ENST00000535290 DCLRE1AQ6PJP8 1040 aa9.54□□□□□ -0.88
CLIP1-206ENST00000535290 TMEM173Q86WV6 379 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-206ENST00000535290 HOMER1Q86YM7 354 aa9.54□□□□□ -0.88
CLIP1-206ENST00000535290 NME8Q8N427 588 aa9.54□□□□□ -0.88
CLIP1-206ENST00000535290 ZNF579Q8NAF0 562 aaKnown RBP9.54□□□□□ -0.88
CLIP1-206ENST00000535290 TMEM87AQ8NBN3 555 aa9.54□□□□□ -0.88
CLIP1-206ENST00000535290 ZBTB44Q8NCP5 570 aa9.54□□□□□ -0.88
CLIP1-206ENST00000535290 ST13P5Q8NFI4 369 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-206ENST00000535290 PJA1Q8NG27 643 aa9.54□□□□□ -0.88
CLIP1-206ENST00000535290 ESR2Q92731 530 aa9.54□□□□□ -0.88
CLIP1-206ENST00000535290 SECISBP2LQ93073 1101 aaKnown RBP9.54□□□□□ -0.88
CLIP1-206ENST00000535290 DCBLD2Q96PD2 775 aa9.54□□□□□ -0.88
CLIP1-206ENST00000535290 ZBP1Q9H171 429 aa9.54□□□□□ -0.88
CLIP1-206ENST00000535290 EPC1Q9H2F5 836 aa9.54□□□□□ -0.88
CLIP1-206ENST00000535290 SFXN1Q9H9B4 322 aa9.54□□□□□ -0.88
CLIP1-206ENST00000535290 SPATA6Q9NWH7 488 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-206ENST00000535290 PKD2L1Q9P0L9 805 aa9.54□□□□□ -0.88
CLIP1-206ENST00000535290 ANGPTL2Q9UKU9 493 aa9.54□□□□□ -0.88
CLIP1-206ENST00000535290 DDX19BQ9UMR2 479 aa9.54□□□□□ -0.88
CLIP1-206ENST00000535290 PCDHGA2Q9Y5H1 932 aa9.54□□□□□ -0.88
CLIP1-206ENST00000535290 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.54□□□□□ -0.88
CLIP1-206ENST00000535290 IGF2RP11717 2491 aa9.53□□□□□ -0.88
CLIP1-206ENST00000535290 KLRF2D3W0D1 207 aa9.53□□□□□ -0.88
CLIP1-206ENST00000535290 GPR182O15218 404 aa9.53□□□□□ -0.88
CLIP1-206ENST00000535290 LAMTOR5O43504 91 aa9.53□□□□□ -0.88
CLIP1-206ENST00000535290 GBP2P32456 591 aaPredicted RBP9.53□□□□□ -0.88
CLIP1-206ENST00000535290 BMS1Q14692 1282 aaKnown RBP9.53□□□□□ -0.88
CLIP1-206ENST00000535290 NONOQ15233 471 aaKnown RBP eCLIP9.53□□□□□ -0.88
CLIP1-206ENST00000535290 PTPN14Q15678 1187 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms