RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 RIOK3O14730 519 aaKnown RBP14.11□□□□□ -0.15
SVIP-205ENST00000533774 RPS6KA5O75582 802 aa14.11□□□□□ -0.15
SVIP-205ENST00000533774 EOMESO95936 686 aa14.11□□□□□ -0.15
SVIP-205ENST00000533774 LMNAP02545 664 aaKnown RBP14.11□□□□□ -0.15
SVIP-205ENST00000533774 RPLP2P05387 115 aaKnown RBP14.11□□□□□ -0.15
SVIP-205ENST00000533774 KIAA1841Q6NSI8 718 aa14.11□□□□□ -0.15
SVIP-205ENST00000533774 FAM228AQ86W67 206 aa14.11□□□□□ -0.15
SVIP-205ENST00000533774 KIAA0319LQ8IZA0 1049 aa14.11□□□□□ -0.15
SVIP-205ENST00000533774 DCLK2Q8N568 766 aa14.11□□□□□ -0.15
SVIP-205ENST00000533774 SMARCC2Q8TAQ2 1214 aa14.11□□□□□ -0.15
SVIP-205ENST00000533774 KCNG4Q8TDN1 519 aa14.11□□□□□ -0.15
SVIP-205ENST00000533774 RNF25Q96BH1 459 aaPredicted RBP14.11□□□□□ -0.15
SVIP-205ENST00000533774 PPP1R16BQ96T49 567 aa14.11□□□□□ -0.15
SVIP-205ENST00000533774 C1orf112Q9NSG2 853 aa14.11□□□□□ -0.15
SVIP-205ENST00000533774 TMEM161AQ9NX61 479 aa14.11□□□□□ -0.15
SVIP-205ENST00000533774 PUF60Q9UHX1 559 aaKnown RBP14.11□□□□□ -0.15
SVIP-205ENST00000533774 MIA3Q5JRA6 1907 aa14.1□□□□□ -0.15
SVIP-205ENST00000533774 PIK3CDO00329 1044 aa14.1□□□□□ -0.15
SVIP-205ENST00000533774 EPCAMP16422 314 aa14.1□□□□□ -0.15
SVIP-205ENST00000533774 TROAPQ12815 778 aa14.1□□□□□ -0.15
SVIP-205ENST00000533774 TRAF1Q13077 416 aa14.1□□□□□ -0.15
SVIP-205ENST00000533774 PUM1Q14671 1186 aaKnown RBP eCLIP14.1□□□□□ -0.15
SVIP-205ENST00000533774 CWC27Q6UX04 472 aaKnown RBP14.1□□□□□ -0.15
SVIP-205ENST00000533774 SIX5Q8N196 739 aa14.1□□□□□ -0.15
SVIP-205ENST00000533774 NME8Q8N427 588 aa14.1□□□□□ -0.15
SVIP-205ENST00000533774 AUTS2Q8WXX7 1259 aa14.1□□□□□ -0.15
SVIP-205ENST00000533774 TMEM117Q9H0C3 514 aa14.1□□□□□ -0.15
SVIP-205ENST00000533774 IL25Q9H293 177 aa14.1□□□□□ -0.15
SVIP-205ENST00000533774 ATP6V0A4Q9HBG4 840 aa14.1□□□□□ -0.15
SVIP-205ENST00000533774 CYP26B1Q9NR63 512 aa14.1□□□□□ -0.15
SVIP-205ENST00000533774 DLL3Q9NYJ7 618 aa14.1□□□□□ -0.15
SVIP-205ENST00000533774 ZFHX4Q86UP3 3567 aa14.09□□□□□ -0.15
SVIP-205ENST00000533774 CFAP47Q6ZTR5 3102 aa14.09□□□□□ -0.15
SVIP-205ENST00000533774 NARSO43776 548 aaKnown RBP14.09□□□□□ -0.15
SVIP-205ENST00000533774 PYGBP11216 843 aa14.09□□□□□ -0.15
SVIP-205ENST00000533774 KLRC1P26715 233 aa14.09□□□□□ -0.15
SVIP-205ENST00000533774 MFAP1P55081 439 aaKnown RBP14.09□□□□□ -0.15
SVIP-205ENST00000533774 SMC1AQ14683 1233 aaKnown RBP14.09□□□□□ -0.15
SVIP-205ENST00000533774 IMMTQ16891 758 aaKnown RBP14.09□□□□□ -0.15
SVIP-205ENST00000533774 SLC39A11Q8N1S5 342 aa14.09□□□□□ -0.15
SVIP-205ENST00000533774 RIN2Q8WYP3 895 aaPredicted RBP14.09□□□□□ -0.15
SVIP-205ENST00000533774 ZNF558Q96NG5 402 aa14.09□□□□□ -0.15
SVIP-205ENST00000533774 RTP3Q9BQQ7 232 aa14.09□□□□□ -0.15
SVIP-205ENST00000533774 DSCC1Q9BVC3 393 aa14.09□□□□□ -0.15
SVIP-205ENST00000533774 ELAC1Q9H777 363 aaKnown RBP14.09□□□□□ -0.15
SVIP-205ENST00000533774 CNNM2Q9H8M5 875 aa14.09□□□□□ -0.15
SVIP-205ENST00000533774 SPG21Q9NZD8 308 aa14.09□□□□□ -0.15
SVIP-205ENST00000533774 DBR1Q9UK59 544 aaKnown RBP14.09□□□□□ -0.15
SVIP-205ENST00000533774 USTQ9Y2C2 406 aa14.09□□□□□ -0.15
SVIP-205ENST00000533774 KRBA1A5PL33 1030 aa14.08□□□□□ -0.16
SVIP-205ENST00000533774 ZBTB42B2RXF5 422 aa14.08□□□□□ -0.16
SVIP-205ENST00000533774 NT5C1B-RDH14C9J2C7 533 aa14.08□□□□□ -0.16
SVIP-205ENST00000533774 ACTR2P61160 394 aa14.08□□□□□ -0.16
SVIP-205ENST00000533774 MTMR1Q13613 665 aa14.08□□□□□ -0.16
SVIP-205ENST00000533774 UBE2SQ16763 222 aa14.08□□□□□ -0.16
SVIP-205ENST00000533774 KIZQ2M2Z5 673 aa14.08□□□□□ -0.16
SVIP-205ENST00000533774 CLLU1OSQ5K130 101 aa14.08□□□□□ -0.16
SVIP-205ENST00000533774 TMC5Q6UXY8 1006 aa14.08□□□□□ -0.16
SVIP-205ENST00000533774 PLPPR4Q7Z2D5 763 aa14.08□□□□□ -0.16
SVIP-205ENST00000533774 CYP2W1Q8TAV3 490 aa14.08□□□□□ -0.16
SVIP-205ENST00000533774 SLC22A17Q8WUG5 538 aa14.08□□□□□ -0.16
SVIP-205ENST00000533774 CDHR1Q96JP9 859 aa14.08□□□□□ -0.16
SVIP-205ENST00000533774 OSMRQ99650 979 aa14.08□□□□□ -0.16
SVIP-205ENST00000533774 JPH1Q9HDC5 661 aaPredicted RBP14.08□□□□□ -0.16
SVIP-205ENST00000533774 JADE2Q9NQC1 790 aa14.08□□□□□ -0.16
SVIP-205ENST00000533774 SLC9A2Q9UBY0 812 aa14.08□□□□□ -0.16
SVIP-205ENST00000533774 DUSP12Q9UNI6 340 aa14.08□□□□□ -0.16
SVIP-205ENST00000533774 TAF6LQ9Y6J9 622 aa14.08□□□□□ -0.16
SVIP-205ENST00000533774 PATJQ8NI35 1801 aa14.07□□□□□ -0.16
SVIP-205ENST00000533774 CXCL14O95715 111 aa14.07□□□□□ -0.16
SVIP-205ENST00000533774 STAT5BP51692 787 aa14.07□□□□□ -0.16
SVIP-205ENST00000533774 KRT17Q04695 432 aa14.07□□□□□ -0.16
SVIP-205ENST00000533774 TDGQ13569 410 aa14.07□□□□□ -0.16
SVIP-205ENST00000533774 ATAT1Q5SQI0 421 aa14.07□□□□□ -0.16
SVIP-205ENST00000533774 TMEM173Q86WV6 379 aaPredicted RBP14.07□□□□□ -0.16
SVIP-205ENST00000533774 CUL5Q93034 780 aa14.07□□□□□ -0.16
SVIP-205ENST00000533774 AZI2Q9H6S1 392 aa14.07□□□□□ -0.16
SVIP-205ENST00000533774 KCNK12Q9HB15 430 aa14.07□□□□□ -0.16
SVIP-205ENST00000533774 MTCL1Q9Y4B5 1905 aaKnown RBP14.07□□□□□ -0.16
SVIP-205ENST00000533774 COL4A3Q01955 1670 aa14.07□□□□□ -0.16
SVIP-205ENST00000533774 MYH15Q9Y2K3 1946 aa14.06□□□□□ -0.16
SVIP-205ENST00000533774 CHD6Q8TD26 2715 aa14.06□□□□□ -0.16
SVIP-205ENST00000533774 GPR182O15218 404 aa14.06□□□□□ -0.16
SVIP-205ENST00000533774 N4BP1O75113 896 aaKnown RBP14.06□□□□□ -0.16
SVIP-205ENST00000533774 GPR32O75388 356 aa14.06□□□□□ -0.16
SVIP-205ENST00000533774 ATG7O95352 703 aa14.06□□□□□ -0.16
SVIP-205ENST00000533774 PPM1AP35813 382 aa14.06□□□□□ -0.16
SVIP-205ENST00000533774 ITGB3BPQ13352 177 aaPredicted RBP14.06□□□□□ -0.16
SVIP-205ENST00000533774 RSPO4Q2I0M5 234 aaPredicted RBP14.06□□□□□ -0.16
SVIP-205ENST00000533774 LRRC43Q8N309 656 aa14.06□□□□□ -0.16
SVIP-205ENST00000533774 RSAD2Q8WXG1 361 aa14.06□□□□□ -0.16
SVIP-205ENST00000533774 ZBP1Q9H171 429 aa14.06□□□□□ -0.16
SVIP-205ENST00000533774 SEMA4AQ9H3S1 761 aa14.06□□□□□ -0.16
SVIP-205ENST00000533774 KCNH7Q9NS40 1196 aa14.06□□□□□ -0.16
SVIP-205ENST00000533774 FBXL21Q9UKT6 434 aa14.06□□□□□ -0.16
SVIP-205ENST00000533774 CHD8Q9HCK8 2581 aa14.06□□□□□ -0.16
SVIP-205ENST00000533774 USP24Q9UPU5 2620 aa14.06□□□□□ -0.16
SVIP-205ENST00000533774 IGKV6D-21A0A0A0MT36 114 aa14.05□□□□□ -0.16
SVIP-205ENST00000533774 IFIT3O14879 490 aaKnown RBP14.05□□□□□ -0.16
SVIP-205ENST00000533774 CCNE2O96020 404 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms