RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 MAMSTRQ6ZN01 415 aa10.43□□□□□ -0.74
PACS1-213ENST00000533756 PDZD3Q86UT5 571 aa10.43□□□□□ -0.74
PACS1-213ENST00000533756 VSIG10LQ86VR7 867 aa10.43□□□□□ -0.74
PACS1-213ENST00000533756 FEZF2Q8TBJ5 459 aa10.43□□□□□ -0.74
PACS1-213ENST00000533756 NELL2Q99435 816 aa10.43□□□□□ -0.74
PACS1-213ENST00000533756 TMEM117Q9H0C3 514 aa10.43□□□□□ -0.74
PACS1-213ENST00000533756 ELAC1Q9H777 363 aaKnown RBP10.43□□□□□ -0.74
PACS1-213ENST00000533756 ATP6V0A4Q9HBG4 840 aa10.43□□□□□ -0.74
PACS1-213ENST00000533756 WDR6Q9NNW5 1121 aaKnown RBP10.43□□□□□ -0.74
PACS1-213ENST00000533756 RGS18Q9NS28 235 aa10.43□□□□□ -0.74
PACS1-213ENST00000533756 TMEM161AQ9NX61 479 aa10.43□□□□□ -0.74
PACS1-213ENST00000533756 TUBE1Q9UJT0 475 aa10.43□□□□□ -0.74
PACS1-213ENST00000533756 MTF2Q9Y483 593 aaPredicted RBP10.43□□□□□ -0.74
PACS1-213ENST00000533756 BPTFQ12830 3046 aa10.42□□□□□ -0.74
PACS1-213ENST00000533756 CNOT1A5YKK6 2376 aaKnown RBP10.42□□□□□ -0.74
PACS1-213ENST00000533756 TSPY2A6NKD2 308 aa10.42□□□□□ -0.74
PACS1-213ENST00000533756 EIF4E1BA6NMX2 242 aaKnown RBP10.42□□□□□ -0.74
PACS1-213ENST00000533756 C9IYK1 514 aa10.42□□□□□ -0.74
PACS1-213ENST00000533756 M0QZ92 97 aa10.42□□□□□ -0.74
PACS1-213ENST00000533756 MYCLP12524 364 aaPredicted RBP10.42□□□□□ -0.74
PACS1-213ENST00000533756 CA8P35219 290 aa10.42□□□□□ -0.74
PACS1-213ENST00000533756 LRRC55Q6ZSA7 311 aa10.42□□□□□ -0.74
PACS1-213ENST00000533756 SLC39A11Q8N1S5 342 aa10.42□□□□□ -0.74
PACS1-213ENST00000533756 CMASQ8NFW8 434 aaPredicted RBP10.42□□□□□ -0.74
PACS1-213ENST00000533756 ADAM32Q8TC27 787 aa10.42□□□□□ -0.74
PACS1-213ENST00000533756 PDCD2LQ9BRP1 358 aa10.42□□□□□ -0.74
PACS1-213ENST00000533756 EPB41L4AQ9HCS5 686 aaPredicted RBP10.42□□□□□ -0.74
PACS1-213ENST00000533756 LTB4R2Q9NPC1 389 aa10.42□□□□□ -0.74
PACS1-213ENST00000533756 CACNA2D2Q9NY47 1150 aa10.42□□□□□ -0.74
PACS1-213ENST00000533756 TRPV2Q9Y5S1 764 aa10.42□□□□□ -0.74
PACS1-213ENST00000533756 NAV2Q8IVL1 2488 aa10.42□□□□□ -0.74
PACS1-213ENST00000533756 ITPR1Q14643 2758 aa10.42□□□□□ -0.74
PACS1-213ENST00000533756 MIA3Q5JRA6 1907 aa10.41□□□□□ -0.74
PACS1-213ENST00000533756 LOXHD1Q8IVV2 1947 aa10.41□□□□□ -0.74
PACS1-213ENST00000533756 KDM3AQ9Y4C1 1321 aa10.41□□□□□ -0.74
PACS1-213ENST00000533756 IGF2RP11717 2491 aa10.41□□□□□ -0.74
PACS1-213ENST00000533756 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.41□□□□□ -0.74
PACS1-213ENST00000533756 HOXA2O43364 376 aa10.41□□□□□ -0.74
PACS1-213ENST00000533756 NMT2O60551 498 aa10.41□□□□□ -0.74
PACS1-213ENST00000533756 TDGF1P13385 188 aa10.41□□□□□ -0.74
PACS1-213ENST00000533756 LAMP2P13473 410 aa10.41□□□□□ -0.74
PACS1-213ENST00000533756 IBSPP21815 317 aaPredicted RBP10.41□□□□□ -0.74
PACS1-213ENST00000533756 FAM189BP81408 668 aa10.41□□□□□ -0.74
PACS1-213ENST00000533756 SLFN5Q08AF3 891 aa10.41□□□□□ -0.74
PACS1-213ENST00000533756 FOXC1Q12948 553 aa10.41□□□□□ -0.74
PACS1-213ENST00000533756 PPFIA1Q13136 1202 aa10.41□□□□□ -0.74
PACS1-213ENST00000533756 SNW1Q13573 536 aaKnown RBP10.41□□□□□ -0.74
PACS1-213ENST00000533756 SIM2Q14190 667 aaPredicted RBP10.41□□□□□ -0.74
PACS1-213ENST00000533756 NEDD9Q14511 834 aa10.41□□□□□ -0.74
PACS1-213ENST00000533756 PPP2R5DQ14738 602 aa10.41□□□□□ -0.74
PACS1-213ENST00000533756 MLF2Q15773 248 aaPredicted RBP10.41□□□□□ -0.74
PACS1-213ENST00000533756 SLC44A4Q53GD3 710 aa10.41□□□□□ -0.74
PACS1-213ENST00000533756 ODR4Q5SWX8 454 aa10.41□□□□□ -0.74
PACS1-213ENST00000533756 STPG1Q5TH74 334 aa10.41□□□□□ -0.74
PACS1-213ENST00000533756 METTL7BQ6UX53 244 aa10.41□□□□□ -0.74
PACS1-213ENST00000533756 TRIM50Q86XT4 487 aa10.41□□□□□ -0.74
PACS1-213ENST00000533756 CLASRPQ8N2M8 674 aaKnown RBP10.41□□□□□ -0.74
PACS1-213ENST00000533756 LRRC43Q8N309 656 aa10.41□□□□□ -0.74
PACS1-213ENST00000533756 GLIS3Q8NEA6 775 aa10.41□□□□□ -0.74
PACS1-213ENST00000533756 BBXQ8WY36 941 aaPredicted RBP10.41□□□□□ -0.74
PACS1-213ENST00000533756 MYADMQ96S97 322 aa10.41□□□□□ -0.74
PACS1-213ENST00000533756 ZBP1Q9H171 429 aa10.41□□□□□ -0.74
PACS1-213ENST00000533756 BCAS3Q9H6U6 928 aa10.41□□□□□ -0.74
PACS1-213ENST00000533756 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.41□□□□□ -0.74
PACS1-213ENST00000533756 DENND3A2RUS2 1198 aa10.4□□□□□ -0.74
PACS1-213ENST00000533756 PATL2C9JE40 543 aaKnown RBP10.4□□□□□ -0.74
PACS1-213ENST00000533756 MGEA5O60502 916 aa10.4□□□□□ -0.74
PACS1-213ENST00000533756 APPP05067 770 aa10.4□□□□□ -0.74
PACS1-213ENST00000533756 CTSAP10619 480 aa10.4□□□□□ -0.74
PACS1-213ENST00000533756 FGFR1P11362 822 aa10.4□□□□□ -0.74
PACS1-213ENST00000533756 CNR2P34972 360 aa10.4□□□□□ -0.74
PACS1-213ENST00000533756 PBX3P40426 434 aa10.4□□□□□ -0.74
PACS1-213ENST00000533756 PSEN1P49768 467 aa10.4□□□□□ -0.74
PACS1-213ENST00000533756 POLGP54098 1239 aaPredicted RBP10.4□□□□□ -0.74
PACS1-213ENST00000533756 GPC5P78333 572 aa10.4□□□□□ -0.74
PACS1-213ENST00000533756 NFX1Q12986 1120 aaKnown RBP10.4□□□□□ -0.74
PACS1-213ENST00000533756 HTR4Q13639 388 aa10.4□□□□□ -0.74
PACS1-213ENST00000533756 GRIK4Q16099 956 aa10.4□□□□□ -0.74
PACS1-213ENST00000533756 MARCH8Q5T0T0 291 aa10.4□□□□□ -0.74
PACS1-213ENST00000533756 UTP14CQ5TAP6 766 aaKnown RBP10.4□□□□□ -0.74
PACS1-213ENST00000533756 PSAPL1Q6NUJ1 521 aa10.4□□□□□ -0.74
PACS1-213ENST00000533756 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.4□□□□□ -0.74
PACS1-213ENST00000533756 IFNL3Q8IZI9 196 aa10.4□□□□□ -0.74
PACS1-213ENST00000533756 VPS52Q8N1B4 723 aa10.4□□□□□ -0.74
PACS1-213ENST00000533756 C12orf50Q8NA57 414 aaPredicted RBP10.4□□□□□ -0.74
PACS1-213ENST00000533756 CASD1Q96PB1 797 aa10.4□□□□□ -0.74
PACS1-213ENST00000533756 ADAM2Q99965 735 aa10.4□□□□□ -0.74
PACS1-213ENST00000533756 CELF4Q9BZC1 486 aaKnown RBP10.4□□□□□ -0.74
PACS1-213ENST00000533756 BOLA2Q9H3K6 86 aa10.4□□□□□ -0.74
PACS1-213ENST00000533756 MRS2Q9HD23 443 aa10.4□□□□□ -0.74
PACS1-213ENST00000533756 IL1RAPL2Q9NP60 686 aa10.4□□□□□ -0.74
PACS1-213ENST00000533756 MAP3K20Q9NYL2 800 aaKnown RBP10.4□□□□□ -0.74
PACS1-213ENST00000533756 MRPL11Q9Y3B7 192 aaKnown RBP10.4□□□□□ -0.74
PACS1-213ENST00000533756 LOC400499M0QZD8 3231 aa10.4□□□□□ -0.74
PACS1-213ENST00000533756 DMXL2Q8TDJ6 3036 aa10.39□□□□□ -0.75
PACS1-213ENST00000533756 CLUHO75153 1309 aa10.39□□□□□ -0.75
PACS1-213ENST00000533756 COL4A3Q01955 1670 aa10.39□□□□□ -0.75
PACS1-213ENST00000533756 IFIT2P09913 472 aaKnown RBP10.39□□□□□ -0.75
PACS1-213ENST00000533756 ZNF806P0C7X5 589 aa10.39□□□□□ -0.75
PACS1-213ENST00000533756 PDHBP11177 359 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms