RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 PPP2R5EQ16537 467 aa18.08■□□□□ 0.49
CTSB-228ENST00000533455 NFIL3Q16649 462 aa18.08■□□□□ 0.49
CTSB-228ENST00000533455 PTPROQ16827 1216 aa18.08■□□□□ 0.49
CTSB-228ENST00000533455 PRR5LQ6MZQ0 368 aa18.08■□□□□ 0.49
CTSB-228ENST00000533455 TBC1D16Q8TBP0 767 aa18.08■□□□□ 0.49
CTSB-228ENST00000533455 BORCS6Q96GS4 357 aa18.08■□□□□ 0.49
CTSB-228ENST00000533455 NOVA2Q9UNW9 492 aaKnown RBP18.08■□□□□ 0.49
CTSB-228ENST00000533455 DDX3YO15523 660 aaKnown RBP18.08■□□□□ 0.48
CTSB-228ENST00000533455 TMEM253P0C7T8 217 aa18.08■□□□□ 0.48
CTSB-228ENST00000533455 CASP4P49662 377 aa18.08■□□□□ 0.48
CTSB-228ENST00000533455 EIF3BP55884 814 aaKnown RBP18.08■□□□□ 0.48
CTSB-228ENST00000533455 GSCP56915 257 aaPredicted RBP18.08■□□□□ 0.48
CTSB-228ENST00000533455 FAM98CQ17RN3 349 aaKnown RBP18.08■□□□□ 0.48
CTSB-228ENST00000533455 TCERG1LQ5VWI1 586 aa18.08■□□□□ 0.48
CTSB-228ENST00000533455 CCDC121Q6ZUS5 278 aa18.08■□□□□ 0.48
CTSB-228ENST00000533455 PROCA1Q8NCQ7 364 aaPredicted RBP18.08■□□□□ 0.48
CTSB-228ENST00000533455 ATP8B4Q8TF62 1192 aa18.08■□□□□ 0.48
CTSB-228ENST00000533455 RFFLQ8WZ73 363 aa18.08■□□□□ 0.48
CTSB-228ENST00000533455 TLCD1Q96CP7 247 aa18.08■□□□□ 0.48
CTSB-228ENST00000533455 POLLQ9UGP5 575 aa18.08■□□□□ 0.48
CTSB-228ENST00000533455 PCDHA1Q9Y5I3 950 aa18.08■□□□□ 0.48
CTSB-228ENST00000533455 MEIS2O14770 477 aa18.07■□□□□ 0.48
CTSB-228ENST00000533455 LMNB1P20700 586 aa18.07■□□□□ 0.48
CTSB-228ENST00000533455 PTENP60484 403 aa18.07■□□□□ 0.48
CTSB-228ENST00000533455 PPATQ06203 517 aa18.07■□□□□ 0.48
CTSB-228ENST00000533455 DHX9Q08211 1270 aaKnown RBP18.07■□□□□ 0.48
CTSB-228ENST00000533455 RAPGEF5Q92565 580 aa18.07■□□□□ 0.48
CTSB-228ENST00000533455 TATDN2Q93075 761 aa18.07■□□□□ 0.48
CTSB-228ENST00000533455 LENG9Q96B70 501 aa18.07■□□□□ 0.48
CTSB-228ENST00000533455 SYT11Q9BT88 431 aa18.07■□□□□ 0.48
CTSB-228ENST00000533455 RAB17Q9H0T7 212 aa18.07■□□□□ 0.48
CTSB-228ENST00000533455 CNOT10Q9H9A5 744 aaKnown RBP18.07■□□□□ 0.48
CTSB-228ENST00000533455 OLFML3Q9NRN5 406 aa18.07■□□□□ 0.48
CTSB-228ENST00000533455 SIPA1L1O43166 1804 aa18.07■□□□□ 0.48
CTSB-228ENST00000533455 MEIS1O00470 390 aa18.06■□□□□ 0.48
CTSB-228ENST00000533455 TMOD1P28289 359 aa18.06■□□□□ 0.48
CTSB-228ENST00000533455 SOX5P35711 763 aa18.06■□□□□ 0.48
CTSB-228ENST00000533455 QPCTQ16769 361 aa18.06■□□□□ 0.48
CTSB-228ENST00000533455 GJB7Q6PEY0 223 aa18.06■□□□□ 0.48
CTSB-228ENST00000533455 KCTD17Q8N5Z5 321 aa18.06■□□□□ 0.48
CTSB-228ENST00000533455 DCAF4Q8WV16 495 aa18.06■□□□□ 0.48
CTSB-228ENST00000533455 CENPTQ96BT3 561 aa18.06■□□□□ 0.48
CTSB-228ENST00000533455 RBM17Q96I25 401 aaKnown RBP18.06■□□□□ 0.48
CTSB-228ENST00000533455 FAM20AQ96MK3 541 aa18.06■□□□□ 0.48
CTSB-228ENST00000533455 C8orf37Q96NL8 207 aa18.06■□□□□ 0.48
CTSB-228ENST00000533455 PSMD1Q99460 953 aa18.06■□□□□ 0.48
CTSB-228ENST00000533455 CELF4Q9BZC1 486 aaKnown RBP18.06■□□□□ 0.48
CTSB-228ENST00000533455 BCCIPQ9P287 314 aaKnown RBP eCLIP18.06■□□□□ 0.48
CTSB-228ENST00000533455 ADAMTSL1Q8N6G6 1762 aa18.06■□□□□ 0.48
CTSB-228ENST00000533455 EIF3DO15371 548 aaKnown RBP eCLIP18.06■□□□□ 0.48
CTSB-228ENST00000533455 EVI5O60447 810 aa18.06■□□□□ 0.48
CTSB-228ENST00000533455 BUB1BO60566 1050 aaPredicted RBP18.06■□□□□ 0.48
CTSB-228ENST00000533455 GAP43P17677 238 aa18.06■□□□□ 0.48
CTSB-228ENST00000533455 BYSLQ13895 437 aaKnown RBP18.06■□□□□ 0.48
CTSB-228ENST00000533455 KRT71Q3SY84 523 aa18.06■□□□□ 0.48
CTSB-228ENST00000533455 PRR16Q569H4 304 aa18.06■□□□□ 0.48
CTSB-228ENST00000533455 ODF2Q5BJF6 829 aa18.06■□□□□ 0.48
CTSB-228ENST00000533455 TRAPPC3LQ5T215 181 aa18.06■□□□□ 0.48
CTSB-228ENST00000533455 P3H4Q92791 437 aa18.06■□□□□ 0.48
CTSB-228ENST00000533455 SEC16BQ96JE7 1060 aa18.06■□□□□ 0.48
CTSB-228ENST00000533455 CCDC17Q96LX7 622 aa18.06■□□□□ 0.48
CTSB-228ENST00000533455 MYCBPQ99417 103 aaPredicted RBP18.06■□□□□ 0.48
CTSB-228ENST00000533455 P2RX7Q99572 595 aaKnown RBP18.06■□□□□ 0.48
CTSB-228ENST00000533455 POLR3CQ9BUI4 534 aaPredicted RBP18.06■□□□□ 0.48
CTSB-228ENST00000533455 CARD9Q9H257 536 aa18.06■□□□□ 0.48
CTSB-228ENST00000533455 ZMYM2Q9UBW7 1377 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 RSPH10B2B2RC85 870 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 TBCAO75347 108 aaKnown RBP18.05■□□□□ 0.48
CTSB-228ENST00000533455 BBOX1O75936 387 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 EYA4O95677 639 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 FGGP02679 453 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 RSPH10BP0C881 870 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 MAGOHP61326 146 aaKnown RBP18.05■□□□□ 0.48
CTSB-228ENST00000533455 GTF2IP78347 998 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 LACTB2Q53H82 288 aaPredicted RBP18.05■□□□□ 0.48
CTSB-228ENST00000533455 DCAF12L1Q5VU92 463 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 MAGOHBQ96A72 148 aaKnown RBP18.05■□□□□ 0.48
CTSB-228ENST00000533455 FMO2Q99518 471 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 MKNK1Q9BUB5 465 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 STK33Q9BYT3 514 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 OSBPL7Q9BZF2 842 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 DPH5Q9H2P9 285 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 SLC40A1Q9NP59 571 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 KLC4Q9NSK0 619 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 DAAM1Q9Y4D1 1078 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 GOLGA6L7A0A1B0GV03 622 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 FAM187AA6NFU0 413 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 TGFB1I1O43294 461 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 GCNT3O95395 438 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 SREBF1P36956 1147 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 CDR1P51861 262 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 PLS1Q14651 629 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 CLUL1Q15846 466 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 SLC15A2Q16348 729 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 ANKRD20A8PQ5CZ79 823 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 DUPD1Q68J44 220 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 AEBP2Q6ZN18 517 aaPredicted RBP18.05■□□□□ 0.48
CTSB-228ENST00000533455 FMNL3Q8IVF7 1028 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 CACNA2D3Q8IZS8 1091 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 SLC35G2Q8TBE7 412 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms