RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 UIMC1Q96RL1 719 aa10.17□□□□□ -0.78
BDNF-216ENST00000532997 FAM129AQ9BZQ8 928 aa10.17□□□□□ -0.78
BDNF-216ENST00000532997 KANSL2Q9H9L4 492 aa10.17□□□□□ -0.78
BDNF-216ENST00000532997 MTMR4Q9NYA4 1195 aa10.17□□□□□ -0.78
BDNF-216ENST00000532997 ZC3H4Q9UPT8 1303 aaKnown RBP10.17□□□□□ -0.78
BDNF-216ENST00000532997 ADAMTSL3P82987 1691 aa10.17□□□□□ -0.78
BDNF-216ENST00000532997 RASSF10A6NK89 507 aa10.17□□□□□ -0.78
BDNF-216ENST00000532997 CLGNO14967 610 aa10.17□□□□□ -0.78
BDNF-216ENST00000532997 TBX3O15119 743 aa10.17□□□□□ -0.78
BDNF-216ENST00000532997 ECEL1O95672 775 aa10.17□□□□□ -0.78
BDNF-216ENST00000532997 ACTN1P12814 892 aa10.17□□□□□ -0.78
BDNF-216ENST00000532997 MARSP56192 900 aaKnown RBP10.17□□□□□ -0.78
BDNF-216ENST00000532997 ZNF543Q08ER8 600 aa10.17□□□□□ -0.78
BDNF-216ENST00000532997 ITIH4Q14624 930 aa10.17□□□□□ -0.78
BDNF-216ENST00000532997 SAMD1Q6SPF0 538 aaPredicted RBP10.17□□□□□ -0.78
BDNF-216ENST00000532997 ZNF365Q70YC5 407 aa10.17□□□□□ -0.78
BDNF-216ENST00000532997 FBXO11Q86XK2 927 aa10.17□□□□□ -0.78
BDNF-216ENST00000532997 STK33Q9BYT3 514 aa10.17□□□□□ -0.78
BDNF-216ENST00000532997 ZC3H12CQ9C0D7 883 aaKnown RBP10.17□□□□□ -0.78
BDNF-216ENST00000532997 ANKRD62A6NC57 917 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 SCTRP47872 440 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 RASSF2P50749 326 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 ASTE1Q2TB18 679 aaPredicted RBP10.16□□□□□ -0.78
BDNF-216ENST00000532997 ANKRD20A8PQ5CZ79 823 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 TBC1D9BQ66K14 1250 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 AEBP2Q6ZN18 517 aaPredicted RBP10.16□□□□□ -0.78
BDNF-216ENST00000532997 ZNF571Q7Z3V5 609 aaPredicted RBP10.16□□□□□ -0.78
BDNF-216ENST00000532997 VSIG1Q86XK7 387 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 ADGRF4Q8IZF3 695 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 SCFD2Q8WU76 684 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 PAIP2Q9BPZ3 127 aaKnown RBP10.16□□□□□ -0.78
BDNF-216ENST00000532997 AZI2Q9H6S1 392 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 PARVGQ9HBI0 331 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.16□□□□□ -0.78
BDNF-216ENST00000532997 ROBO3Q96MS0 1386 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 GTPBP10A4D1E9 387 aaKnown RBP10.16□□□□□ -0.78
BDNF-216ENST00000532997 PHF20L1A8MW92 1017 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 F8VZ95 297 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 NDC80O14777 642 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 HIP1RO75146 1068 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 CHN1P15882 459 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 CYP11B2P19099 503 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 PRKCIP41743 596 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 CYP4A11Q02928 519 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 ITPK1Q13572 414 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 TRAPPC3LQ5T215 181 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 SLFN13Q68D06 897 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 TMC3Q7Z5M5 1100 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 COL23A1Q86Y22 540 aaPredicted RBP10.16□□□□□ -0.78
BDNF-216ENST00000532997 TPH2Q8IWU9 490 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 LMNTD2Q8IXW0 634 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 MGARPQ8TDB4 240 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 CENPTQ96BT3 561 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 PABPC3Q9H361 631 aaKnown RBP10.16□□□□□ -0.78
BDNF-216ENST00000532997 CD248Q9HCU0 757 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 SEL1LQ9UBV2 794 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 CEP83Q9Y592 693 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 POTEFA5A3E0 1075 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 PHF2O75151 1096 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 POTEIP0CG38 1075 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 HMGB2P26583 209 aaKnown RBP10.16□□□□□ -0.78
BDNF-216ENST00000532997 MESDQ14696 234 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 DRAP1Q14919 205 aaPredicted RBP10.16□□□□□ -0.78
BDNF-216ENST00000532997 POTEGQ6S5H5 508 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 POTEEQ6S8J3 1075 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 ARHGEF18Q6ZSZ5 1173 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 TBC1D1Q86TI0 1168 aaPredicted RBP10.16□□□□□ -0.78
BDNF-216ENST00000532997 ANKRD42Q8N9B4 389 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 UHMK1Q8TAS1 419 aaKnown RBP10.16□□□□□ -0.78
BDNF-216ENST00000532997 SCFD1Q8WVM8 642 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 KAT2BQ92831 832 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 IWS1Q96ST2 819 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 BHMT2Q9H2M3 363 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 BATF3Q9NR55 127 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 USP40Q9NVE5 1235 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 PNMA2Q9UL42 364 aa10.16□□□□□ -0.78
BDNF-216ENST00000532997 MEIS1O00470 390 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 KLRK1P26718 216 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 PON1P27169 355 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 SLC16A2P36021 539 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 FAM133BQ5BKY9 247 aaKnown RBP10.15□□□□□ -0.78
BDNF-216ENST00000532997 BTNL9Q6UXG8 535 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 PPP1R21Q6ZMI0 780 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 GLYCTKQ8IVS8 523 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 TRIM51Q9BSJ1 452 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 MKNK1Q9BUB5 465 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 CD209Q9NNX6 404 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 TMOD2Q9NZR1 351 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 NUP98P52948 1817 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 GPR75-ASB3A0A0A6YYF3 556 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 EVI5O60447 810 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 RPS6KA4O75676 772 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 ARHGAP4P98171 946 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 PREPLQ4J6C6 727 aaPredicted RBP10.15□□□□□ -0.78
BDNF-216ENST00000532997 EMC10Q5UCC4 262 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 MOXD1Q6UVY6 613 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 KCTD1Q719H9 257 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 SLC35G2Q8TBE7 412 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 DCAF4Q8WV16 495 aa10.15□□□□□ -0.78
BDNF-216ENST00000532997 GANQ9H2C0 597 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms