RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 TRANK1O15050 2925 aa19.37■□□□□ 0.69
PHRF1-204ENST00000532550 FAM205CA6NFA0 338 aa19.36■□□□□ 0.69
PHRF1-204ENST00000532550 EML1O00423 815 aa19.36■□□□□ 0.69
PHRF1-204ENST00000532550 DKC1O60832 514 aaKnown RBP eCLIP19.36■□□□□ 0.69
PHRF1-204ENST00000532550 GPR32O75388 356 aa19.36■□□□□ 0.69
PHRF1-204ENST00000532550 NLRP11P59045 1033 aaKnown RBP19.36■□□□□ 0.69
PHRF1-204ENST00000532550 SAFBQ15424 915 aaKnown RBP eCLIP19.36■□□□□ 0.69
PHRF1-204ENST00000532550 MTERF2Q49AM1 385 aa19.36■□□□□ 0.69
PHRF1-204ENST00000532550 EPC2Q52LR7 807 aa19.36■□□□□ 0.69
PHRF1-204ENST00000532550 TMEM192Q8IY95 271 aa19.36■□□□□ 0.69
PHRF1-204ENST00000532550 SLFN12Q8IYM2 578 aa19.36■□□□□ 0.69
PHRF1-204ENST00000532550 TMEM40Q8WWA1 233 aa19.36■□□□□ 0.69
PHRF1-204ENST00000532550 LINC01599Q8WXQ3 324 aa19.36■□□□□ 0.69
PHRF1-204ENST00000532550 SYMPKQ92797 1274 aaKnown RBP19.36■□□□□ 0.69
PHRF1-204ENST00000532550 HAS1Q92839 578 aa19.36■□□□□ 0.69
PHRF1-204ENST00000532550 TNFRSF25Q93038 417 aa19.36■□□□□ 0.69
PHRF1-204ENST00000532550 COL25A1Q9BXS0 654 aaPredicted RBP19.36■□□□□ 0.69
PHRF1-204ENST00000532550 TMX1Q9H3N1 280 aa19.36■□□□□ 0.69
PHRF1-204ENST00000532550 ERVK-5Q9HDB9 667 aa19.36■□□□□ 0.69
PHRF1-204ENST00000532550 RNF216Q9NWF9 866 aaPredicted RBP19.36■□□□□ 0.69
PHRF1-204ENST00000532550 LRFN2Q9ULH4 789 aa19.36■□□□□ 0.69
PHRF1-204ENST00000532550 CUL9Q8IWT3 2517 aa19.36■□□□□ 0.69
PHRF1-204ENST00000532550 DENND3A2RUS2 1198 aa19.35■□□□□ 0.69
PHRF1-204ENST00000532550 DGKIO75912 1065 aa19.35■□□□□ 0.69
PHRF1-204ENST00000532550 P4HBP07237 508 aaKnown RBP19.35■□□□□ 0.69
PHRF1-204ENST00000532550 QARSP47897 775 aaKnown RBP19.35■□□□□ 0.69
PHRF1-204ENST00000532550 DNM2P50570 870 aa19.35■□□□□ 0.69
PHRF1-204ENST00000532550 ST3GAL1Q11201 340 aa19.35■□□□□ 0.69
PHRF1-204ENST00000532550 BTG3Q14201 252 aaPredicted RBP19.35■□□□□ 0.69
PHRF1-204ENST00000532550 TARBP2Q15633 366 aaKnown RBP19.35■□□□□ 0.69
PHRF1-204ENST00000532550 POTEDQ86YR6 584 aa19.35■□□□□ 0.69
PHRF1-204ENST00000532550 NPAS4Q8IUM7 802 aa19.35■□□□□ 0.69
PHRF1-204ENST00000532550 LINC01465Q8N7H1 131 aa19.35■□□□□ 0.69
PHRF1-204ENST00000532550 KIF2CQ99661 725 aa19.35■□□□□ 0.69
PHRF1-204ENST00000532550 SH2B1Q9NRF2 756 aaPredicted RBP19.35■□□□□ 0.69
PHRF1-204ENST00000532550 VAV3Q9UKW4 847 aa19.35■□□□□ 0.69
PHRF1-204ENST00000532550 STBD1O95210 358 aa19.34■□□□□ 0.69
PHRF1-204ENST00000532550 IBSPP21815 317 aaPredicted RBP19.34■□□□□ 0.69
PHRF1-204ENST00000532550 RBM25P49756 843 aaKnown RBP19.34■□□□□ 0.69
PHRF1-204ENST00000532550 MRPS5P82675 430 aaKnown RBP19.34■□□□□ 0.69
PHRF1-204ENST00000532550 CDC42EP1Q00587 391 aa19.34■□□□□ 0.69
PHRF1-204ENST00000532550 GPM6BQ13491 265 aa19.34■□□□□ 0.69
PHRF1-204ENST00000532550 EPHA7Q15375 998 aa19.34■□□□□ 0.69
PHRF1-204ENST00000532550 TJAP1Q5JTD0 557 aa19.34■□□□□ 0.69
PHRF1-204ENST00000532550 ZNF689Q96CS4 500 aaPredicted RBP19.34■□□□□ 0.69
PHRF1-204ENST00000532550 C8orf76Q96K31 380 aa19.34■□□□□ 0.69
PHRF1-204ENST00000532550 SCLT1Q96NL6 688 aa19.34■□□□□ 0.69
PHRF1-204ENST00000532550 ADAM2Q99965 735 aa19.34■□□□□ 0.69
PHRF1-204ENST00000532550 RWDD3Q9Y3V2 267 aa19.34■□□□□ 0.69
PHRF1-204ENST00000532550 PCDHB7Q9Y5E2 793 aa19.34■□□□□ 0.69
PHRF1-204ENST00000532550 ADGRA3Q8IWK6 1321 aa19.33■□□□□ 0.69
PHRF1-204ENST00000532550 H3BNC9 293 aa19.33■□□□□ 0.68
PHRF1-204ENST00000532550 EIF4BP23588 611 aaKnown RBP19.33■□□□□ 0.68
PHRF1-204ENST00000532550 SARSP49591 514 aaKnown RBP19.33■□□□□ 0.68
PHRF1-204ENST00000532550 GUCY1B3Q02153 619 aa19.33■□□□□ 0.68
PHRF1-204ENST00000532550 PTPROQ16827 1216 aa19.33■□□□□ 0.68
PHRF1-204ENST00000532550 NCAPH2Q6IBW4 605 aa19.33■□□□□ 0.68
PHRF1-204ENST00000532550 SLC24A5Q71RS6 500 aa19.33■□□□□ 0.68
PHRF1-204ENST00000532550 FAM228AQ86W67 206 aa19.33■□□□□ 0.68
PHRF1-204ENST00000532550 FAM184AQ8NB25 1140 aa19.33■□□□□ 0.68
PHRF1-204ENST00000532550 SH2D3AQ9BRG2 576 aa19.33■□□□□ 0.68
PHRF1-204ENST00000532550 ADAMTS10Q9H324 1103 aa19.33■□□□□ 0.68
PHRF1-204ENST00000532550 UPF2Q9HAU5 1272 aaKnown RBP19.33■□□□□ 0.68
PHRF1-204ENST00000532550 RGS18Q9NS28 235 aa19.33■□□□□ 0.68
PHRF1-204ENST00000532550 C1orf112Q9NSG2 853 aa19.33■□□□□ 0.68
PHRF1-204ENST00000532550 PCDHA12Q9UN75 941 aa19.33■□□□□ 0.68
PHRF1-204ENST00000532550 TMEM150BA6NC51 233 aa19.32■□□□□ 0.68
PHRF1-204ENST00000532550 RB1P06400 928 aa19.32■□□□□ 0.68
PHRF1-204ENST00000532550 CTNNB1P35222 781 aa19.32■□□□□ 0.68
PHRF1-204ENST00000532550 BMPR1AP36894 532 aa19.32■□□□□ 0.68
PHRF1-204ENST00000532550 GPC3P51654 580 aa19.32■□□□□ 0.68
PHRF1-204ENST00000532550 HMGN5P82970 282 aaKnown RBP19.32■□□□□ 0.68
PHRF1-204ENST00000532550 CALCRLQ16602 461 aa19.32■□□□□ 0.68
PHRF1-204ENST00000532550 ANO5Q75V66 913 aa19.32■□□□□ 0.68
PHRF1-204ENST00000532550 EXOC8Q8IYI6 725 aa19.32■□□□□ 0.68
PHRF1-204ENST00000532550 CRIPAKQ8N1N5 446 aa19.32■□□□□ 0.68
PHRF1-204ENST00000532550 IL27Q8NEV9 243 aa19.32■□□□□ 0.68
PHRF1-204ENST00000532550 NLRP7Q8WX94 980 aa19.32■□□□□ 0.68
PHRF1-204ENST00000532550 ZNF668Q96K58 619 aaPredicted RBP19.32■□□□□ 0.68
PHRF1-204ENST00000532550 ASB2Q96Q27 587 aa19.32■□□□□ 0.68
PHRF1-204ENST00000532550 JPH2Q9BR39 696 aaPredicted RBP19.32■□□□□ 0.68
PHRF1-204ENST00000532550 RC3H2Q9HBD1 1191 aaKnown RBP19.32■□□□□ 0.68
PHRF1-204ENST00000532550 COG5Q9UP83 839 aa19.32■□□□□ 0.68
PHRF1-204ENST00000532550 IGKV6-21A0A0C4DH24 114 aa19.31■□□□□ 0.68
PHRF1-204ENST00000532550 MGEA5O60502 916 aa19.31■□□□□ 0.68
PHRF1-204ENST00000532550 MAFO75444 373 aaPredicted RBP19.31■□□□□ 0.68
PHRF1-204ENST00000532550 ZSCAN20P17040 1043 aaPredicted RBP19.31■□□□□ 0.68
PHRF1-204ENST00000532550 ATP2B1P20020 1258 aa19.31■□□□□ 0.68
PHRF1-204ENST00000532550 RABEP1Q15276 862 aa19.31■□□□□ 0.68
PHRF1-204ENST00000532550 AAK1Q2M2I8 961 aa19.31■□□□□ 0.68
PHRF1-204ENST00000532550 OTUD6AQ7L8S5 288 aa19.31■□□□□ 0.68
PHRF1-204ENST00000532550 CMTR2Q8IYT2 770 aaKnown RBP19.31■□□□□ 0.68
PHRF1-204ENST00000532550 MRPL38Q96DV4 380 aaKnown RBP19.31■□□□□ 0.68
PHRF1-204ENST00000532550 CEP89Q96ST8 783 aa19.31■□□□□ 0.68
PHRF1-204ENST00000532550 CYP26B1Q9NR63 512 aa19.31■□□□□ 0.68
PHRF1-204ENST00000532550 NLRC5Q86WI3 1866 aa19.31■□□□□ 0.68
PHRF1-204ENST00000532550 ST18O60284 1047 aa19.3■□□□□ 0.68
PHRF1-204ENST00000532550 NEMFO60524 1076 aa19.3■□□□□ 0.68
PHRF1-204ENST00000532550 TXKP42681 527 aa19.3■□□□□ 0.68
PHRF1-204ENST00000532550 GNL2Q13823 731 aaKnown RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms