RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 TSPYL2Q9H2G4 693 aaPredicted RBP7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 SEPT11Q9NVA2 429 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 FBXO28Q9NVF7 368 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 PDP2Q9P2J9 529 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 CCDC194A0A1B0GVG4 234 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 USP17L5A8MUK1 530 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 DDX39AO00148 427 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 NVLO15381 856 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 SERPINB3P29508 390 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 IREB2P48200 963 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 CUL1Q13616 776 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 BLMHQ13867 455 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 FAM83BQ5T0W9 1011 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 OLFML1Q6UWY5 402 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 GPC2Q8N158 579 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 AGAP11Q8TF27 550 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 NELFBQ8WX92 580 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 IWS1Q96ST2 819 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 DPH5Q9H2P9 285 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 UNC45AQ9H3U1 944 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 ADARB2Q9NS39 739 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 GALNT8Q9NY28 637 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 ZMYM6O95789 1325 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 MYO3BQ8WXR4 1341 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 BICDL2A1A5D9 508 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 ZNF185O15231 689 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 EPB41P11171 864 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 CYP27A1Q02318 531 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 ARID5AQ03989 594 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 CALCOCO2Q13137 446 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 NCAPHQ15003 741 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 SLC9C1Q4G0N8 1177 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 TRAPPC11Q7Z392 1133 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 GALNT15Q8N3T1 639 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 KIF2BQ8N4N8 673 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 MMGT1Q8N4V1 131 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 GFM2Q969S9 779 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 CLMNQ96JQ2 1002 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 XPO6Q96QU8 1125 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 EPAS1Q99814 870 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 ITGB1BP2Q9UKP3 347 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 KCNK3O14649 394 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 BUB1O43683 1085 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 PLEKHA8P1O95397 391 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 TFRCP02786 760 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 UBA7P41226 1012 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 STAT6P42226 847 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 FNTAP49354 379 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 DDX12PQ92771 950 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 RIOK1Q9BRS2 568 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 ZCWPW1Q9H0M4 648 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 SERPINA10Q9UK55 444 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 ATP8A1Q9Y2Q0 1164 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 TSC22D4Q9Y3Q8 395 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 CICQ96RK0 1608 aaPredicted RBP7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 GPR75-ASB3A0A0A6YYF3 556 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 SRRM3A6NNA2 597 aaPredicted RBP7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 SUPT3HO75486 399 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 MOCS3O95396 460 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 XRCC4Q13426 336 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 CYLC2Q14093 348 aaPredicted RBP7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 KBTBD12Q3ZCT8 623 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 ZFYVE27Q5T4F4 411 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 NANOGNBQ7Z5D8 188 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 RBM12BQ8IXT5 1001 aaKnown RBP7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 CSGALNACT2Q8N6G5 542 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 PDCD7Q8N8D1 485 aaKnown RBP7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 RETREG2Q8NC44 543 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 AGBL3Q8NEM8 1001 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 TATDN2Q93075 761 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 SH3GL2Q99962 352 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 BMP2KQ9NSY1 1161 aaPredicted RBP7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 ATXN10Q9UBB4 475 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 LRWD1Q9UFC0 647 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 SNX12Q9UMY4 172 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 RGPD1P0DJD0 1748 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 A0A1B0GTH6 734 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 KRIT1O00522 736 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 RNF8O76064 485 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 OATP04181 439 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 VIL1P09327 827 aaKnown RBP7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 CALM1P0DP23 149 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 CALM2P0DP24 149 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 CALM3P0DP25 149 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 PYGBP11216 843 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 HOXA13P31271 388 aaPredicted RBP7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 TMED10P49755 219 aaKnown RBP7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 C12orf60Q5U649 245 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 LRIG3Q6UXM1 1119 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 SCYL3Q8IZE3 742 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 STAG2Q8N3U4 1231 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 CFAP61Q8NHU2 1237 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 USP6NLQ92738 828 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 EXOC1Q9NV70 894 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 DMGDHQ9UI17 866 aaKnown RBP7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 TUBE1Q9UJT0 475 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 BZW2Q9Y6E2 419 aaKnown RBP7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 BTAF1O14981 1849 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 MAGEA13PA6NCF6 341 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms