RNA–Protein interactions for RNA: ENST00000532289.1

PTP4A2-214, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-214ENST00000532289 LMNB2Q03252 620 aa22.31■■□□□ 1.16
PTP4A2-214ENST00000532289 PHLDB3Q6NSJ2 640 aa22.31■■□□□ 1.16
PTP4A2-214ENST00000532289 SLC39A11Q8N1S5 342 aa22.31■■□□□ 1.16
PTP4A2-214ENST00000532289 ZSCAN10Q96SZ4 725 aaPredicted RBP22.31■■□□□ 1.16
PTP4A2-214ENST00000532289 RNF19AQ9NV58 838 aa22.31■■□□□ 1.16
PTP4A2-214ENST00000532289 ST3GAL5Q9UNP4 418 aa22.31■■□□□ 1.16
PTP4A2-214ENST00000532289 SIT1Q9Y3P8 196 aa22.31■■□□□ 1.16
PTP4A2-214ENST00000532289 POTEMA6NI47 508 aa22.3■■□□□ 1.16
PTP4A2-214ENST00000532289 NT5C2P49902 561 aa22.3■■□□□ 1.16
PTP4A2-214ENST00000532289 TRAF1Q13077 416 aa22.3■■□□□ 1.16
PTP4A2-214ENST00000532289 PCNX4Q63HM2 1172 aa22.3■■□□□ 1.16
PTP4A2-214ENST00000532289 POTEGQ6S5H5 508 aa22.3■■□□□ 1.16
PTP4A2-214ENST00000532289 NLRX1Q86UT6 975 aa22.3■■□□□ 1.16
PTP4A2-214ENST00000532289 LRRC43Q8N309 656 aa22.3■■□□□ 1.16
PTP4A2-214ENST00000532289 OTUD7AQ8TE49 926 aaPredicted RBP22.3■■□□□ 1.16
PTP4A2-214ENST00000532289 TRAPPC12Q8WVT3 735 aa22.3■■□□□ 1.16
PTP4A2-214ENST00000532289 TMEM40Q8WWA1 233 aa22.3■■□□□ 1.16
PTP4A2-214ENST00000532289 CDHR5Q9HBB8 845 aa22.3■■□□□ 1.16
PTP4A2-214ENST00000532289 RCAN3Q9UKA8 241 aa22.3■■□□□ 1.16
PTP4A2-214ENST00000532289 BAZ2BQ9UIF8 2168 aaKnown RBP22.3■■□□□ 1.16
PTP4A2-214ENST00000532289 CA8P35219 290 aa22.29■■□□□ 1.16
PTP4A2-214ENST00000532289 ZNF528Q3MIS6 628 aa22.29■■□□□ 1.16
PTP4A2-214ENST00000532289 ODR4Q5SWX8 454 aa22.29■■□□□ 1.16
PTP4A2-214ENST00000532289 CABP7Q86V35 215 aa22.29■■□□□ 1.16
PTP4A2-214ENST00000532289 RSAD2Q8WXG1 361 aa22.29■■□□□ 1.16
PTP4A2-214ENST00000532289 PCYT2Q99447 389 aa22.29■■□□□ 1.16
PTP4A2-214ENST00000532289 GPR182O15218 404 aa22.28■■□□□ 1.16
PTP4A2-214ENST00000532289 SPTLC1O15269 473 aa22.28■■□□□ 1.16
PTP4A2-214ENST00000532289 HOXA2O43364 376 aa22.28■■□□□ 1.16
PTP4A2-214ENST00000532289 GLULP15104 373 aa22.28■■□□□ 1.16
PTP4A2-214ENST00000532289 BMS1Q14692 1282 aaKnown RBP22.28■■□□□ 1.16
PTP4A2-214ENST00000532289 SLC35G1Q2M3R5 365 aa22.28■■□□□ 1.16
PTP4A2-214ENST00000532289 MCMDC2Q4G0Z9 681 aa22.28■■□□□ 1.16
PTP4A2-214ENST00000532289 HOMER1Q86YM7 354 aa22.28■■□□□ 1.16
PTP4A2-214ENST00000532289 FAM227BQ96M60 508 aa22.28■■□□□ 1.16
PTP4A2-214ENST00000532289 SFXN1Q9H9B4 322 aa22.28■■□□□ 1.16
PTP4A2-214ENST00000532289 MAD2L2Q9UI95 211 aa22.28■■□□□ 1.16
PTP4A2-214ENST00000532289 GINS2Q9Y248 185 aa22.28■■□□□ 1.16
PTP4A2-214ENST00000532289 IRAK3Q9Y616 596 aa22.28■■□□□ 1.16
PTP4A2-214ENST00000532289 LAMA4Q16363 1823 aa22.27■■□□□ 1.16
PTP4A2-214ENST00000532289 A0A0D9SFI3 127 aa22.27■■□□□ 1.16
PTP4A2-214ENST00000532289 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.27■■□□□ 1.16
PTP4A2-214ENST00000532289 N4BP1O75113 896 aaKnown RBP22.27■■□□□ 1.16
PTP4A2-214ENST00000532289 TGM1P22735 817 aa22.27■■□□□ 1.16
PTP4A2-214ENST00000532289 DSC3Q14574 896 aa22.27■■□□□ 1.16
PTP4A2-214ENST00000532289 PLCB4Q15147 1175 aa22.27■■□□□ 1.16
PTP4A2-214ENST00000532289 LETM2Q2VYF4 491 aa22.27■■□□□ 1.16
PTP4A2-214ENST00000532289 MTHFD1LQ6UB35 978 aa22.27■■□□□ 1.16
PTP4A2-214ENST00000532289 SLC44A3Q8N4M1 653 aa22.27■■□□□ 1.16
PTP4A2-214ENST00000532289 TNPO1Q92973 898 aaKnown RBP22.27■■□□□ 1.16
PTP4A2-214ENST00000532289 PIGSQ96S52 555 aa22.27■■□□□ 1.16
PTP4A2-214ENST00000532289 ZBP1Q9H171 429 aa22.27■■□□□ 1.16
PTP4A2-214ENST00000532289 ANKRD11Q6UB99 2663 aaPredicted RBP22.27■■□□□ 1.16
PTP4A2-214ENST00000532289 MIA3Q5JRA6 1907 aa22.27■■□□□ 1.16
PTP4A2-214ENST00000532289 ASPMQ8IZT6 3477 aa22.26■■□□□ 1.15
PTP4A2-214ENST00000532289 SRFP11831 508 aa22.26■■□□□ 1.15
PTP4A2-214ENST00000532289 NONOQ15233 471 aaKnown RBP eCLIP22.26■■□□□ 1.15
PTP4A2-214ENST00000532289 ZNF589Q86UQ0 364 aaPredicted RBP22.26■■□□□ 1.15
PTP4A2-214ENST00000532289 AUTS2Q8WXX7 1259 aa22.26■■□□□ 1.15
PTP4A2-214ENST00000532289 GPRASP2Q96D09 838 aa22.26■■□□□ 1.15
PTP4A2-214ENST00000532289 PATJQ8NI35 1801 aa22.26■■□□□ 1.15
PTP4A2-214ENST00000532289 EVPLQ92817 2033 aa22.26■■□□□ 1.15
PTP4A2-214ENST00000532289 PALM3A6NDB9 673 aaPredicted RBP22.25■■□□□ 1.15
PTP4A2-214ENST00000532289 GIT2Q14161 759 aa22.25■■□□□ 1.15
PTP4A2-214ENST00000532289 ACAP1Q15027 740 aa22.25■■□□□ 1.15
PTP4A2-214ENST00000532289 C20orf194Q5TEA3 1177 aa22.25■■□□□ 1.15
PTP4A2-214ENST00000532289 VPS52Q8N1B4 723 aa22.25■■□□□ 1.15
PTP4A2-214ENST00000532289 TMEM87AQ8NBN3 555 aa22.25■■□□□ 1.15
PTP4A2-214ENST00000532289 GPR152Q8TDT2 470 aa22.25■■□□□ 1.15
PTP4A2-214ENST00000532289 SECISBP2LQ93073 1101 aaKnown RBP22.25■■□□□ 1.15
PTP4A2-214ENST00000532289 CDHR1Q96JP9 859 aa22.25■■□□□ 1.15
PTP4A2-214ENST00000532289 ZSWIM5Q9P217 1185 aa22.25■■□□□ 1.15
PTP4A2-214ENST00000532289 FASNP49327 2511 aaKnown RBP22.24■■□□□ 1.15
PTP4A2-214ENST00000532289 PPM1JQ5JR12 505 aa22.24■■□□□ 1.15
PTP4A2-214ENST00000532289 FAM228AQ86W67 206 aa22.24■■□□□ 1.15
PTP4A2-214ENST00000532289 ABI1Q8IZP0 508 aa22.24■■□□□ 1.15
PTP4A2-214ENST00000532289 PJA1Q8NG27 643 aa22.24■■□□□ 1.15
PTP4A2-214ENST00000532289 EVI5LQ96CN4 794 aa22.24■■□□□ 1.15
PTP4A2-214ENST00000532289 RIOX1Q9H6W3 641 aa22.24■■□□□ 1.15
PTP4A2-214ENST00000532289 ARHGEF3Q9NR81 526 aa22.24■■□□□ 1.15
PTP4A2-214ENST00000532289 FBXO4Q9UKT5 387 aa22.24■■□□□ 1.15
PTP4A2-214ENST00000532289 DOCK8Q8NF50 2099 aa22.24■■□□□ 1.15
PTP4A2-214ENST00000532289 B4E1Z4 1266 aa22.23■■□□□ 1.15
PTP4A2-214ENST00000532289 NT5C1B-RDH14C9J2C7 533 aa22.23■■□□□ 1.15
PTP4A2-214ENST00000532289 MX1P20591 662 aa22.23■■□□□ 1.15
PTP4A2-214ENST00000532289 COL9A3Q14050 684 aaPredicted RBP22.23■■□□□ 1.15
PTP4A2-214ENST00000532289 C15orf39Q6ZRI6 1047 aa22.23■■□□□ 1.15
PTP4A2-214ENST00000532289 KIAA0319LQ8IZA0 1049 aa22.23■■□□□ 1.15
PTP4A2-214ENST00000532289 AZI2Q9H6S1 392 aa22.23■■□□□ 1.15
PTP4A2-214ENST00000532289 PCDHGA2Q9Y5H1 932 aa22.23■■□□□ 1.15
PTP4A2-214ENST00000532289 PNMA6FA0A0J9YX94 578 aa22.22■■□□□ 1.15
PTP4A2-214ENST00000532289 ZNF213O14771 459 aa22.22■■□□□ 1.15
PTP4A2-214ENST00000532289 CTSAP10619 480 aa22.22■■□□□ 1.15
PTP4A2-214ENST00000532289 HOXB3P14651 431 aaPredicted RBP22.22■■□□□ 1.15
PTP4A2-214ENST00000532289 ITGB5P18084 799 aa22.22■■□□□ 1.15
PTP4A2-214ENST00000532289 METAP2P50579 478 aaKnown RBP eCLIP22.22■■□□□ 1.15
PTP4A2-214ENST00000532289 CLLU1OSQ5K130 101 aa22.22■■□□□ 1.15
PTP4A2-214ENST00000532289 PLPPR4Q7Z2D5 763 aa22.22■■□□□ 1.15
PTP4A2-214ENST00000532289 PPFIBP1Q86W92 1011 aa22.22■■□□□ 1.15
PTP4A2-214ENST00000532289 NXPE3Q969Y0 559 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms