RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 RAB15P59190 212 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 SCRN1Q12765 414 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 PWP1Q13610 501 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 COL9A2Q14055 689 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 SNX17Q15036 470 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 NTRK3Q16288 839 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 PKN1Q16512 942 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 LY6KQ17RY6 165 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 TRIM60Q495X7 471 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 C1orf53Q5VUE5 145 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 PCNX4Q63HM2 1172 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 CCDC62Q6P9F0 684 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 CXCL17Q6UXB2 119 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 KIAA0907Q7Z7F0 614 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 NLRX1Q86UT6 975 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 CCDC148Q8NFR7 591 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 COPS5Q92905 334 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 SGSM3Q96HU1 749 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 SPON2Q9BUD6 331 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 C1QTNF2Q9BXJ5 285 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 EHMT1Q9H9B1 1298 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 C6orf50Q9HD87 102 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 RTEL1Q9NZ71 1219 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 FAM8A1Q9UBU6 413 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 PCDHA6Q9UN73 950 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 ATP11BQ9Y2G3 1177 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 PCDHA8Q9Y5H6 950 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 ZNFX1Q9P2E3 1918 aaKnown RBP6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 A0A0U1RQG5 324 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 ESYT2A0FGR8 921 aa6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 SPATA31C2B4DYI2 1134 aa6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 FIBPO43427 364 aa6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 KPNA6O60684 536 aa6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 PQBP1O60828 265 aaKnown RBP6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 DEXIO95424 95 aa6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 MYL3P08590 195 aa6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 SYN1P17600 705 aa6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 GNA11P29992 359 aa6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 NASPP49321 788 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 NLRP5P59047 1200 aa6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 MRPS9P82933 396 aaKnown RBP6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 TLE2Q04725 743 aa6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 DNM1Q05193 864 aaKnown RBP6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 ARHGAP1Q07960 439 aa6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 IFRD2Q12894 506 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 AP3B2Q13367 1082 aa6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 LAMC2Q13753 1193 aa6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 MCTP2Q6DN12 878 aa6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 NYAP1Q6ZVC0 841 aa6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 REXO1Q8N1G1 1221 aaKnown RBP6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 NECAB1Q8N987 351 aa6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 BICD2Q8TD16 824 aa6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 AFG1LQ8WV93 481 aa6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 EMID1Q96A84 441 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 MYO19Q96H55 970 aa6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 INPP4AQ96PE3 977 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 MTRQ99707 1265 aa6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 MTG1Q9BT17 334 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 ZMYND12Q9H0C1 365 aa6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 PRDM5Q9NQX1 630 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 TMEM260Q9NX78 707 aa6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 VPS54Q9P1Q0 977 aa6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 ZMYND8Q9ULU4 1186 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 LIMCH1Q9UPQ0 1083 aa6.57□□□□□ -1.36
HMGB1P42-201ENST00000532126 MROH7Q68CQ1 1323 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 STK36Q9NRP7 1315 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 DCDC2CA8MYV0 355 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 ARVCFO00192 962 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 KLF4O43474 513 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 CPNE3O75131 537 aaKnown RBP6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 PPFIA4O75335 1185 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 LARGE1O95461 756 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 GGPS1O95749 300 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 MMP3P08254 477 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 XBP1P17861 261 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 ITGB5P18084 799 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 UBA1P22314 1058 aaKnown RBP6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 ICAM3P32942 547 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 PSMC6P62333 389 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 PURAQ00577 322 aaKnown RBP6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 SP2Q02086 613 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 MTMR1Q13613 665 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 ITGA7Q13683 1181 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 NEDD9Q14511 834 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 DGKDQ16760 1214 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 ME3Q16798 604 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 CELF3Q5SZQ8 465 aaKnown RBP6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 ZFYVE27Q5T4F4 411 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 JAKMIP3Q5VZ66 844 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 THSD4Q6ZMP0 1018 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 ANKRD33Q7Z3H0 272 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 GIMAP8Q8ND71 665 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 PPTC7Q8NI37 304 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 WASF1Q92558 559 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 GTF3C6Q969F1 213 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 CDHR1Q96JP9 859 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 PGBD1Q96JS3 809 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 SPATA33Q96N06 139 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 TOX2Q96NM4 488 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 KCTD15Q96SI1 283 aaPredicted RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms