RNA–Protein interactions for RNA: ENST00000531238.1

RELA-216, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 4

Gene RELA, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-216ENST00000531238 PTPRSQ13332 1948 aa18.21■□□□□ 0.51
RELA-216ENST00000531238 LCHNA4D1U4 455 aa18.2■□□□□ 0.5
RELA-216ENST00000531238 MAFO75444 373 aaPredicted RBP18.2■□□□□ 0.5
RELA-216ENST00000531238 RPLP2P05387 115 aaKnown RBP18.2■□□□□ 0.5
RELA-216ENST00000531238 OR52Z1P0C646 297 aa18.2■□□□□ 0.5
RELA-216ENST00000531238 SPATA31C1P0DKV0 1188 aa18.2■□□□□ 0.5
RELA-216ENST00000531238 KCNJ6P48051 423 aa18.2■□□□□ 0.5
RELA-216ENST00000531238 RAB30Q15771 203 aa18.2■□□□□ 0.5
RELA-216ENST00000531238 TMEM266Q2M3C6 531 aa18.2■□□□□ 0.5
RELA-216ENST00000531238 FAM117BQ6P1L5 589 aa18.2■□□□□ 0.5
RELA-216ENST00000531238 SPRED2Q7Z698 418 aa18.2■□□□□ 0.5
RELA-216ENST00000531238 SNX21Q969T3 373 aa18.2■□□□□ 0.5
RELA-216ENST00000531238 CDX2Q99626 313 aaPredicted RBP18.2■□□□□ 0.5
RELA-216ENST00000531238 ZSWIM4Q9H7M6 989 aa18.2■□□□□ 0.5
RELA-216ENST00000531238 CYP26B1Q9NR63 512 aa18.2■□□□□ 0.5
RELA-216ENST00000531238 FOXD4L1Q9NU39 408 aa18.2■□□□□ 0.5
RELA-216ENST00000531238 GINS2Q9Y248 185 aa18.2■□□□□ 0.5
RELA-216ENST00000531238 SQORQ9Y6N5 450 aa18.2■□□□□ 0.5
RELA-216ENST00000531238 H3BQV1 296 aa18.19■□□□□ 0.5
RELA-216ENST00000531238 K7ELQ4 463 aaPredicted RBP18.19■□□□□ 0.5
RELA-216ENST00000531238 EFCAB14O75071 495 aa18.19■□□□□ 0.5
RELA-216ENST00000531238 GJB5O95377 273 aa18.19■□□□□ 0.5
RELA-216ENST00000531238 CA3P07451 260 aa18.19■□□□□ 0.5
RELA-216ENST00000531238 YWHABP31946 246 aaKnown RBP18.19■□□□□ 0.5
RELA-216ENST00000531238 NLRP11P59045 1033 aaKnown RBP18.19■□□□□ 0.5
RELA-216ENST00000531238 TBC1D8BQ0IIM8 1120 aa18.19■□□□□ 0.5
RELA-216ENST00000531238 PTGDRQ13258 359 aa18.19■□□□□ 0.5
RELA-216ENST00000531238 ORC2Q13416 577 aaPredicted RBP18.19■□□□□ 0.5
RELA-216ENST00000531238 APBB2Q92870 758 aa18.19■□□□□ 0.5
RELA-216ENST00000531238 TOP1MTQ969P6 601 aa18.19■□□□□ 0.5
RELA-216ENST00000531238 OSMRQ99650 979 aa18.19■□□□□ 0.5
RELA-216ENST00000531238 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.19■□□□□ 0.5
RELA-216ENST00000531238 NOL7Q9UMY1 257 aaKnown RBP18.19■□□□□ 0.5
RELA-216ENST00000531238 SPTBN5Q9NRC6 3674 aaKnown RBP18.18■□□□□ 0.5
RELA-216ENST00000531238 PRUNE2Q8WUY3 3088 aa18.18■□□□□ 0.5
RELA-216ENST00000531238 TMEM265A0A087WTH1 108 aa18.18■□□□□ 0.5
RELA-216ENST00000531238 MED24O75448 989 aa18.18■□□□□ 0.5
RELA-216ENST00000531238 CRYBB1P53674 252 aaPredicted RBP18.18■□□□□ 0.5
RELA-216ENST00000531238 CATSPER3Q86XQ3 398 aa18.18■□□□□ 0.5
RELA-216ENST00000531238 MYOCDQ8IZQ8 938 aa18.18■□□□□ 0.5
RELA-216ENST00000531238 CEP170P1Q96L14 293 aa18.18■□□□□ 0.5
RELA-216ENST00000531238 ERVK-5Q9HDB9 667 aa18.18■□□□□ 0.5
RELA-216ENST00000531238 AKT3Q9Y243 479 aa18.18■□□□□ 0.5
RELA-216ENST00000531238 GBF1Q92538 1859 aa18.18■□□□□ 0.5
RELA-216ENST00000531238 M0QZ92 97 aa18.17■□□□□ 0.5
RELA-216ENST00000531238 TLL1O43897 1013 aa18.17■□□□□ 0.5
RELA-216ENST00000531238 MGEA5O60502 916 aa18.17■□□□□ 0.5
RELA-216ENST00000531238 DKC1O60832 514 aaKnown RBP eCLIP18.17■□□□□ 0.5
RELA-216ENST00000531238 LYPLA2O95372 231 aa18.17■□□□□ 0.5
RELA-216ENST00000531238 TMOD1P28289 359 aa18.17■□□□□ 0.5
RELA-216ENST00000531238 GPC3P51654 580 aa18.17■□□□□ 0.5
RELA-216ENST00000531238 ECM1Q16610 540 aa18.17■□□□□ 0.5
RELA-216ENST00000531238 FAM228AQ86W67 206 aa18.17■□□□□ 0.5
RELA-216ENST00000531238 KSR1Q8IVT5 923 aa18.17■□□□□ 0.5
RELA-216ENST00000531238 CRIPAKQ8N1N5 446 aa18.17■□□□□ 0.5
RELA-216ENST00000531238 USP38Q8NB14 1042 aa18.17■□□□□ 0.5
RELA-216ENST00000531238 PIGOQ8TEQ8 1089 aa18.17■□□□□ 0.5
RELA-216ENST00000531238 MYLIPQ8WY64 445 aa18.17■□□□□ 0.5
RELA-216ENST00000531238 INTS4Q96HW7 963 aaKnown RBP18.17■□□□□ 0.5
RELA-216ENST00000531238 RAD9AQ99638 391 aa18.17■□□□□ 0.5
RELA-216ENST00000531238 DHX33Q9H6R0 707 aaKnown RBP18.17■□□□□ 0.5
RELA-216ENST00000531238 SLC28A3Q9HAS3 691 aa18.17■□□□□ 0.5
RELA-216ENST00000531238 ST3GAL5Q9UNP4 418 aa18.17■□□□□ 0.5
RELA-216ENST00000531238 CSDE1O75534 798 aaKnown RBP18.16■□□□□ 0.5
RELA-216ENST00000531238 RPS6KA5O75582 802 aa18.16■□□□□ 0.5
RELA-216ENST00000531238 UPP2O95045 317 aa18.16■□□□□ 0.5
RELA-216ENST00000531238 AMHP03971 560 aa18.16■□□□□ 0.5
RELA-216ENST00000531238 FXR2P51116 673 aaKnown RBP eCLIP18.16■□□□□ 0.5
RELA-216ENST00000531238 HTRA4P83105 476 aaPredicted RBP18.16■□□□□ 0.5
RELA-216ENST00000531238 TAP1Q03518 808 aa18.16■□□□□ 0.5
RELA-216ENST00000531238 XKR9Q5GH70 373 aa18.16■□□□□ 0.5
RELA-216ENST00000531238 ZBED2Q9BTP6 218 aa18.16■□□□□ 0.5
RELA-216ENST00000531238 BMP2KQ9NSY1 1161 aaPredicted RBP18.16■□□□□ 0.5
RELA-216ENST00000531238 SUCLA2Q9P2R7 463 aaPredicted RBP18.16■□□□□ 0.5
RELA-216ENST00000531238 MICAL3Q7RTP6 2002 aa18.15■□□□□ 0.5
RELA-216ENST00000531238 REV3LO60673 3130 aa18.15■□□□□ 0.5
RELA-216ENST00000531238 TRANK1O15050 2925 aa18.15■□□□□ 0.5
RELA-216ENST00000531238 RFXAPO00287 272 aa18.15■□□□□ 0.5
RELA-216ENST00000531238 SYT1P21579 422 aa18.15■□□□□ 0.5
RELA-216ENST00000531238 FGFR4P22455 802 aa18.15■□□□□ 0.5
RELA-216ENST00000531238 NFX1Q12986 1120 aaKnown RBP18.15■□□□□ 0.5
RELA-216ENST00000531238 PAK2Q13177 524 aa18.15■□□□□ 0.5
RELA-216ENST00000531238 RILPL1Q5EBL4 403 aa18.15■□□□□ 0.5
RELA-216ENST00000531238 PPP2R2DQ66LE6 453 aa18.15■□□□□ 0.5
RELA-216ENST00000531238 OTUD6AQ7L8S5 288 aa18.15■□□□□ 0.5
RELA-216ENST00000531238 FERMT3Q86UX7 667 aa18.15■□□□□ 0.5
RELA-216ENST00000531238 TMEM143Q96AN5 459 aa18.15■□□□□ 0.5
RELA-216ENST00000531238 POLR3CQ9BUI4 534 aaPredicted RBP18.15■□□□□ 0.5
RELA-216ENST00000531238 PRDM12Q9H4Q4 367 aa18.15■□□□□ 0.5
RELA-216ENST00000531238 CERS4Q9HA82 394 aa18.15■□□□□ 0.5
RELA-216ENST00000531238 XPNPEP1Q9NQW7 623 aa18.15■□□□□ 0.5
RELA-216ENST00000531238 ANKEF1Q9NU02 776 aa18.15■□□□□ 0.5
RELA-216ENST00000531238 LOXHD1Q8IVV2 1947 aa18.15■□□□□ 0.5
RELA-216ENST00000531238 A0A087WZ62 844 aa18.14■□□□□ 0.49
RELA-216ENST00000531238 EPOPA6NHQ4 379 aa18.14■□□□□ 0.49
RELA-216ENST00000531238 EIF4BP23588 611 aaKnown RBP18.14■□□□□ 0.49
RELA-216ENST00000531238 CDC25AP30304 524 aa18.14■□□□□ 0.49
RELA-216ENST00000531238 RARRES1P49788 294 aa18.14■□□□□ 0.49
RELA-216ENST00000531238 ADGRE1Q14246 886 aa18.14■□□□□ 0.49
RELA-216ENST00000531238 PDIA5Q14554 519 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms