RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 DEFB128Q7Z7B8 93 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 RPUSD2Q8IZ73 545 aaKnown RBP5.35□□□□□ -1.55
SSBP3-213ENST00000530618 LINC00301Q8NCQ3 95 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 AFAP1L1Q8TED9 768 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 SNX29Q8TEQ0 813 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 GLG1Q92896 1179 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 MBOAT7Q96N66 472 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 SLC9A7Q96T83 725 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 UHRF1Q96T88 793 aaPredicted RBP5.35□□□□□ -1.55
SSBP3-213ENST00000530618 KRTAP4-6Q9BYQ5 205 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 GTPBP4Q9BZE4 634 aaKnown RBP5.35□□□□□ -1.55
SSBP3-213ENST00000530618 CUEDC2Q9H467 287 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 SMARCAD1Q9H4L7 1026 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 CERS4Q9HA82 394 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 SLC28A3Q9HAS3 691 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 TUFT1Q9NNX1 390 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 KCNMB3Q9NPA1 279 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 BMP2KQ9NSY1 1161 aaPredicted RBP5.35□□□□□ -1.55
SSBP3-213ENST00000530618 HDAC6Q9UBN7 1215 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 KCNG1Q9UIX4 513 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 PCDHB6Q9Y5E3 794 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 PCDHA10Q9Y5I2 948 aa5.35□□□□□ -1.55
SSBP3-213ENST00000530618 SRPRBQ9Y5M8 271 aaKnown RBP5.35□□□□□ -1.55
SSBP3-213ENST00000530618 KMT2EQ8IZD2 1858 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 DCHS1Q96JQ0 3298 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 IGLV3-22A0A075B6J6 115 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 A0A1W2PQ27 194 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 A0A1W2PQ64 194 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 A0A1W2PQD8 194 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 ZBBXA8MT70 800 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 DDX39AO00148 427 aaKnown RBP5.34□□□□□ -1.55
SSBP3-213ENST00000530618 MSH4O15457 936 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 CHMP2AO43633 222 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 SLC37A4O43826 429 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 GAS2O43903 313 aaKnown RBP5.34□□□□□ -1.55
SSBP3-213ENST00000530618 KINO60870 393 aaKnown RBP5.34□□□□□ -1.55
SSBP3-213ENST00000530618 PPFIA4O75335 1185 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 LGR5O75473 907 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 BAIAP3O94812 1187 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 SUPT20HL2P0C7V6 817 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 ZNF286BP0CG31 522 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 CKBP12277 381 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 UBA1P22314 1058 aaKnown RBP5.34□□□□□ -1.55
SSBP3-213ENST00000530618 IGFBP4P22692 258 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 ABCD1P33897 745 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 CCT6AP40227 531 aaKnown RBP5.34□□□□□ -1.55
SSBP3-213ENST00000530618 STAT6P42226 847 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 QARSP47897 775 aaKnown RBP5.34□□□□□ -1.55
SSBP3-213ENST00000530618 PSEN2P49810 448 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 PSMC5P62195 406 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 ADAM17P78536 824 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 MRPS9P82933 396 aaKnown RBP5.34□□□□□ -1.55
SSBP3-213ENST00000530618 HTRA4P83105 476 aaPredicted RBP5.34□□□□□ -1.55
SSBP3-213ENST00000530618 SP4Q02446 784 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 PKP1Q13835 747 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 COL19A1Q14993 1142 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 EPHA7Q15375 998 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 PTGISQ16647 500 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 SKOR2Q2VWA4 1001 aaPredicted RBP5.34□□□□□ -1.55
SSBP3-213ENST00000530618 HSDL1Q3SXM5 330 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 RRAGBQ5VZM2 374 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 ADALQ6DHV7 355 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 PDXDC2PQ6P474 469 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 LRRC8DQ7L1W4 858 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 CYFIP1Q7L576 1253 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 CABP7Q86V35 215 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 ZNF710Q8N1W2 664 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 IQUBQ8NA54 791 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 RETREG2Q8NC44 543 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 ETNPPLQ8TBG4 499 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 CAGE1Q8TC20 777 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 PHOSPHO2Q8TCD6 241 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 GDPD5Q8WTR4 605 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 LEO1Q8WVC0 666 aaPredicted RBP5.34□□□□□ -1.55
SSBP3-213ENST00000530618 CRYGNQ8WXF5 182 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 MRPS27Q92552 414 aaKnown RBP5.34□□□□□ -1.55
SSBP3-213ENST00000530618 SLC5A5Q92911 643 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 USP28Q96RU2 1077 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 C16orf70Q9BSU1 422 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 TIPINQ9BVW5 301 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 MTIF3Q9H2K0 278 aaKnown RBP5.34□□□□□ -1.55
SSBP3-213ENST00000530618 ZSWIM4Q9H7M6 989 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 ZNF302Q9NR11 478 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 DISC1Q9NRI5 854 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 NRBP2Q9NSY0 501 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 ERAP1Q9NZ08 941 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 KCND2Q9NZV8 630 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 PKD2L1Q9P0L9 805 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 TFIP11Q9UBB9 837 aaKnown RBP5.34□□□□□ -1.55
SSBP3-213ENST00000530618 STK17AQ9UEE5 414 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 RCOR1Q9UKL0 485 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 DNM3Q9UQ16 869 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 CLIC4Q9Y696 253 aa5.34□□□□□ -1.55
SSBP3-213ENST00000530618 MYH9P35579 1960 aaKnown RBP5.34□□□□□ -1.55
SSBP3-213ENST00000530618 SPTBN4Q9H254 2564 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 DNAH14Q0VDD8 3507 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 PHLPP2Q6ZVD8 1323 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 EMSYQ7Z589 1322 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.33□□□□□ -1.56
SSBP3-213ENST00000530618 LINC01553A4QN01 128 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms