RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 ITIH6Q6UXX5 1313 aa13.38□□□□□ -0.27
SCN3B-206ENST00000530277 PDE2AO00408 941 aaPredicted RBP13.38□□□□□ -0.27
SCN3B-206ENST00000530277 SART1O43290 800 aaKnown RBP13.38□□□□□ -0.27
SCN3B-206ENST00000530277 THAP12O43422 761 aa13.38□□□□□ -0.27
SCN3B-206ENST00000530277 LMNB1P20700 586 aa13.38□□□□□ -0.27
SCN3B-206ENST00000530277 MAPK4P31152 587 aa13.38□□□□□ -0.27
SCN3B-206ENST00000530277 NSFP46459 744 aaKnown RBP13.38□□□□□ -0.27
SCN3B-206ENST00000530277 TFAMQ00059 246 aaKnown RBP13.38□□□□□ -0.27
SCN3B-206ENST00000530277 COG2Q14746 738 aa13.38□□□□□ -0.27
SCN3B-206ENST00000530277 LRRC14Q15048 493 aa13.38□□□□□ -0.27
SCN3B-206ENST00000530277 SYCP2LQ5T4T6 812 aa13.38□□□□□ -0.27
SCN3B-206ENST00000530277 CCNI2Q6ZMN8 369 aaPredicted RBP13.38□□□□□ -0.27
SCN3B-206ENST00000530277 SP8Q8IXZ3 490 aa13.38□□□□□ -0.27
SCN3B-206ENST00000530277 FBF1Q8TES7 1133 aa13.38□□□□□ -0.27
SCN3B-206ENST00000530277 IQCDQ96DY2 449 aa13.38□□□□□ -0.27
SCN3B-206ENST00000530277 FMO2Q99518 471 aa13.38□□□□□ -0.27
SCN3B-206ENST00000530277 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.38□□□□□ -0.27
SCN3B-206ENST00000530277 NOC2LQ9Y3T9 749 aaKnown RBP13.38□□□□□ -0.27
SCN3B-206ENST00000530277 PCDHB4Q9Y5E5 795 aa13.38□□□□□ -0.27
SCN3B-206ENST00000530277 GALCP54803 685 aa13.37□□□□□ -0.27
SCN3B-206ENST00000530277 DR1Q01658 176 aa13.37□□□□□ -0.27
SCN3B-206ENST00000530277 AMIGO3Q86WK7 504 aa13.37□□□□□ -0.27
SCN3B-206ENST00000530277 RPUSD2Q8IZ73 545 aaKnown RBP13.37□□□□□ -0.27
SCN3B-206ENST00000530277 WDR11Q9BZH6 1224 aa13.37□□□□□ -0.27
SCN3B-206ENST00000530277 FZD1Q9UP38 647 aa13.37□□□□□ -0.27
SCN3B-206ENST00000530277 PLAGL2Q9UPG8 496 aa13.37□□□□□ -0.27
SCN3B-206ENST00000530277 SYNJ2BP-COX16A0A087WUM0 186 aa13.37□□□□□ -0.27
SCN3B-206ENST00000530277 FRMD3A2A2Y4 597 aa13.37□□□□□ -0.27
SCN3B-206ENST00000530277 EVI5O60447 810 aa13.37□□□□□ -0.27
SCN3B-206ENST00000530277 PIK3CAP42336 1068 aa13.37□□□□□ -0.27
SCN3B-206ENST00000530277 MAGOHP61326 146 aaKnown RBP13.37□□□□□ -0.27
SCN3B-206ENST00000530277 NT5DC1Q5TFE4 455 aa13.37□□□□□ -0.27
SCN3B-206ENST00000530277 FAM84AQ96KN4 292 aa13.37□□□□□ -0.27
SCN3B-206ENST00000530277 COX16Q9P0S2 106 aa13.37□□□□□ -0.27
SCN3B-206ENST00000530277 L1RE1Q9UN81 338 aa13.37□□□□□ -0.27
SCN3B-206ENST00000530277 ANO9A1A5B4 782 aa13.37□□□□□ -0.27
SCN3B-206ENST00000530277 INO80B-WBP1J3KQ70 363 aa13.37□□□□□ -0.27
SCN3B-206ENST00000530277 CYP26A1O43174 497 aa13.37□□□□□ -0.27
SCN3B-206ENST00000530277 PPP4CP60510 307 aa13.37□□□□□ -0.27
SCN3B-206ENST00000530277 PDIA5Q14554 519 aa13.37□□□□□ -0.27
SCN3B-206ENST00000530277 SLC18A3Q16572 532 aa13.37□□□□□ -0.27
SCN3B-206ENST00000530277 SGO2Q562F6 1265 aa13.37□□□□□ -0.27
SCN3B-206ENST00000530277 FAM133BQ5BKY9 247 aaKnown RBP13.37□□□□□ -0.27
SCN3B-206ENST00000530277 GADL1Q6ZQY3 521 aa13.37□□□□□ -0.27
SCN3B-206ENST00000530277 CTAGE3PQ8IX95 158 aa13.37□□□□□ -0.27
SCN3B-206ENST00000530277 C1orf54Q8WWF1 131 aa13.37□□□□□ -0.27
SCN3B-206ENST00000530277 SPIRE2Q8WWL2 714 aa13.37□□□□□ -0.27
SCN3B-206ENST00000530277 PI4K2AQ9BTU6 479 aa13.37□□□□□ -0.27
SCN3B-206ENST00000530277 INO80BQ9C086 356 aaPredicted RBP13.37□□□□□ -0.27
SCN3B-206ENST00000530277 BLOC1S4Q9NUP1 217 aa13.37□□□□□ -0.27
SCN3B-206ENST00000530277 TRPC6Q9Y210 931 aa13.37□□□□□ -0.27
SCN3B-206ENST00000530277 BZW2Q9Y6E2 419 aaKnown RBP13.37□□□□□ -0.27
SCN3B-206ENST00000530277 hCG_1984214I3L0E3 225 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 HDLBPQ00341 1268 aaKnown RBP13.36□□□□□ -0.27
SCN3B-206ENST00000530277 CEP55Q53EZ4 464 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 SLC10A5Q5PT55 438 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 SH3RF1Q7Z6J0 888 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 TMEM139Q8IV31 216 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 ZNF713Q8N859 430 aaPredicted RBP13.36□□□□□ -0.27
SCN3B-206ENST00000530277 TCP11Q8WWU5 503 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 LBHD1Q9BQE6 289 aaPredicted RBP13.36□□□□□ -0.27
SCN3B-206ENST00000530277 LRRC4BQ9NT99 713 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 TYW1Q9NV66 732 aaKnown RBP13.36□□□□□ -0.27
SCN3B-206ENST00000530277 FBXL5Q9UKA1 691 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 MAGED2Q9UNF1 606 aaPredicted RBP13.36□□□□□ -0.27
SCN3B-206ENST00000530277 AKAP12Q02952 1782 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 WDR91A4D1P6 747 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 RAD51CO43502 376 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 GAS8O95995 478 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 HSPA1LP34931 641 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 MXRA7P84157 204 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 VPS72Q15906 364 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 CCDC93Q567U6 631 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 LIN9Q5TKA1 542 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 CACNA2D3Q8IZS8 1091 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 ARL8AQ96BM9 186 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 NSRP1Q9H0G5 558 aaKnown RBP13.36□□□□□ -0.27
SCN3B-206ENST00000530277 AZI2Q9H6S1 392 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 ANAPC7Q9UJX3 599 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 DENND3A2RUS2 1198 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 ATP2A1O14983 1001 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 STX2P32856 288 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 ARHGAP25P42331 645 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 CASP5P51878 434 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 SOX10P56693 466 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 CCDC6Q16204 474 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 SEZ6Q53EL9 994 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 IRF2BP1Q8IU81 584 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 THNSL1Q8IYQ7 743 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 PROM2Q8N271 834 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 SHISA4Q96DD7 197 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 BTBD6Q96KE9 485 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 ACCSQ96QU6 501 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 C11orf70Q9BRQ4 267 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 FGFBP2Q9BYJ0 223 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 HPCAL4Q9UM19 191 aa13.36□□□□□ -0.27
SCN3B-206ENST00000530277 GOLGA8MH3BSY2 632 aa13.35□□□□□ -0.27
SCN3B-206ENST00000530277 MSH4O15457 936 aa13.35□□□□□ -0.27
SCN3B-206ENST00000530277 POLD1P28340 1107 aa13.35□□□□□ -0.27
SCN3B-206ENST00000530277 PRELPP51888 382 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms