RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 KANK2Q63ZY3 851 aa6.36□□□□□ -1.39
C11orf88-204ENST00000529661 RTN4RL1Q86UN2 441 aaPredicted RBP6.36□□□□□ -1.39
C11orf88-204ENST00000529661 AHI1Q8N157 1196 aa6.36□□□□□ -1.39
C11orf88-204ENST00000529661 UBR7Q8N806 425 aa6.36□□□□□ -1.39
C11orf88-204ENST00000529661 RBM15Q96T37 977 aaKnown RBP eCLIP6.36□□□□□ -1.39
C11orf88-204ENST00000529661 FAM126AQ9BYI3 521 aaPredicted RBP6.36□□□□□ -1.39
C11orf88-204ENST00000529661 ZDHHC5Q9C0B5 715 aa6.36□□□□□ -1.39
C11orf88-204ENST00000529661 DDX56Q9NY93 547 aaKnown RBP6.36□□□□□ -1.39
C11orf88-204ENST00000529661 ZKSCAN5Q9Y2L8 839 aa6.36□□□□□ -1.39
C11orf88-204ENST00000529661 GAS7O60861 476 aa6.35□□□□□ -1.39
C11orf88-204ENST00000529661 CNOT4O95628 575 aaKnown RBP6.35□□□□□ -1.39
C11orf88-204ENST00000529661 PTX3P26022 381 aaPredicted RBP6.35□□□□□ -1.39
C11orf88-204ENST00000529661 FNTBP49356 437 aa6.35□□□□□ -1.39
C11orf88-204ENST00000529661 NFKB2Q00653 900 aa6.35□□□□□ -1.39
C11orf88-204ENST00000529661 ALDH6A1Q02252 535 aaKnown RBP6.35□□□□□ -1.39
C11orf88-204ENST00000529661 MOGSQ13724 837 aa6.35□□□□□ -1.39
C11orf88-204ENST00000529661 GRAMD4Q6IC98 578 aa6.35□□□□□ -1.39
C11orf88-204ENST00000529661 DDX46Q7L014 1031 aaKnown RBP6.35□□□□□ -1.39
C11orf88-204ENST00000529661 DDX42Q86XP3 938 aaKnown RBP eCLIP6.35□□□□□ -1.39
C11orf88-204ENST00000529661 NXPE1Q8N323 547 aa6.35□□□□□ -1.39
C11orf88-204ENST00000529661 PPM1KQ8N3J5 372 aa6.35□□□□□ -1.39
C11orf88-204ENST00000529661 PRPF38AQ8NAV1 312 aaKnown RBP6.35□□□□□ -1.39
C11orf88-204ENST00000529661 E2F7Q96AV8 911 aa6.35□□□□□ -1.39
C11orf88-204ENST00000529661 FOXRED1Q96CU9 486 aaPredicted RBP6.35□□□□□ -1.39
C11orf88-204ENST00000529661 LRRC37BQ96QE4 947 aa6.35□□□□□ -1.39
C11orf88-204ENST00000529661 KIAA1683Q9H0B3 1180 aa6.35□□□□□ -1.39
C11orf88-204ENST00000529661 TYW1Q9NV66 732 aaKnown RBP6.35□□□□□ -1.39
C11orf88-204ENST00000529661 OXSMQ9NWU1 459 aa6.35□□□□□ -1.39
C11orf88-204ENST00000529661 SMPD4Q9NXE4 827 aa6.35□□□□□ -1.39
C11orf88-204ENST00000529661 CNOT11Q9UKZ1 510 aaKnown RBP6.35□□□□□ -1.39
C11orf88-204ENST00000529661 SLC4A7Q9Y6M7 1214 aa6.35□□□□□ -1.39
C11orf88-204ENST00000529661 A0A0G2JNJ9 132 aa6.34□□□□□ -1.39
C11orf88-204ENST00000529661 ZNF891A8MT65 544 aaPredicted RBP6.34□□□□□ -1.39
C11orf88-204ENST00000529661 EYA4O95677 639 aa6.34□□□□□ -1.39
C11orf88-204ENST00000529661 CYP17A1P05093 508 aa6.34□□□□□ -1.39
C11orf88-204ENST00000529661 APEX1P27695 318 aaKnown RBP6.34□□□□□ -1.39
C11orf88-204ENST00000529661 CNGA1P29973 690 aa6.34□□□□□ -1.39
C11orf88-204ENST00000529661 SLC6A3Q01959 620 aa6.34□□□□□ -1.39
C11orf88-204ENST00000529661 EFEMP1Q12805 493 aa6.34□□□□□ -1.39
C11orf88-204ENST00000529661 PCBP1Q15365 356 aaKnown RBP eCLIP6.34□□□□□ -1.39
C11orf88-204ENST00000529661 SPATS1Q496A3 300 aa6.34□□□□□ -1.39
C11orf88-204ENST00000529661 SLFN13Q68D06 897 aa6.34□□□□□ -1.39
C11orf88-204ENST00000529661 LARP4Q71RC2 724 aaKnown RBP eCLIP6.34□□□□□ -1.39
C11orf88-204ENST00000529661 CIR1Q86X95 450 aaPredicted RBP6.34□□□□□ -1.39
C11orf88-204ENST00000529661 RTKN2Q8IZC4 609 aa6.34□□□□□ -1.39
C11orf88-204ENST00000529661 AFAP1L2Q8N4X5 818 aa6.34□□□□□ -1.39
C11orf88-204ENST00000529661 LMF1Q96S06 567 aa6.34□□□□□ -1.39
C11orf88-204ENST00000529661 ELF4Q99607 663 aaPredicted RBP6.34□□□□□ -1.39
C11orf88-204ENST00000529661 FOXB1Q99853 325 aa6.34□□□□□ -1.39
C11orf88-204ENST00000529661 METTL14Q9HCE5 456 aaKnown RBP6.34□□□□□ -1.39
C11orf88-204ENST00000529661 TOMM22Q9NS69 142 aa6.34□□□□□ -1.39
C11orf88-204ENST00000529661 THG1LQ9NWX6 298 aaKnown RBP6.34□□□□□ -1.39
C11orf88-204ENST00000529661 H2AFY2Q9P0M6 372 aaPredicted RBP6.34□□□□□ -1.39
C11orf88-204ENST00000529661 Q9UFV3 132 aa6.34□□□□□ -1.39
C11orf88-204ENST00000529661 ATP2A2P16615 1042 aaKnown RBP6.33□□□□□ -1.4
C11orf88-204ENST00000529661 RGS3P49796 1198 aa6.33□□□□□ -1.4
C11orf88-204ENST00000529661 MEOX1P50221 254 aa6.33□□□□□ -1.4
C11orf88-204ENST00000529661 STAT5BP51692 787 aa6.33□□□□□ -1.4
C11orf88-204ENST00000529661 RAC3P60763 192 aa6.33□□□□□ -1.4
C11orf88-204ENST00000529661 ROM1Q03395 351 aa6.33□□□□□ -1.4
C11orf88-204ENST00000529661 MAP3K12Q12852 859 aa6.33□□□□□ -1.4
C11orf88-204ENST00000529661 NOLC1Q14978 699 aaKnown RBP eCLIP6.33□□□□□ -1.4
C11orf88-204ENST00000529661 EIF4HQ15056 248 aaKnown RBP6.33□□□□□ -1.4
C11orf88-204ENST00000529661 ZMAT1Q5H9K5 638 aa6.33□□□□□ -1.4
C11orf88-204ENST00000529661 CT47A1Q5JQC4 288 aaPredicted RBP6.33□□□□□ -1.4
C11orf88-204ENST00000529661 PRAMEF9Q5VWM5 478 aa6.33□□□□□ -1.4
C11orf88-204ENST00000529661 SLFN12LQ6IEE8 588 aa6.33□□□□□ -1.4
C11orf88-204ENST00000529661 STRA8Q7Z7C7 330 aa6.33□□□□□ -1.4
C11orf88-204ENST00000529661 CHST13Q8NET6 341 aa6.33□□□□□ -1.4
C11orf88-204ENST00000529661 SCYL1Q96KG9 808 aa6.33□□□□□ -1.4
C11orf88-204ENST00000529661 C8orf49Q96NF6 230 aa6.33□□□□□ -1.4
C11orf88-204ENST00000529661 ORAI3Q9BRQ5 295 aa6.33□□□□□ -1.4
C11orf88-204ENST00000529661 SSBP3Q9BWW4 388 aaPredicted RBP6.33□□□□□ -1.4
C11orf88-204ENST00000529661 MEGF9Q9H1U4 602 aa6.33□□□□□ -1.4
C11orf88-204ENST00000529661 ST6GALNAC2Q9UJ37 374 aa6.33□□□□□ -1.4
C11orf88-204ENST00000529661 FAM184BQ9ULE4 1060 aa6.33□□□□□ -1.4
C11orf88-204ENST00000529661 UBA6A0AVT1 1052 aaPredicted RBP6.32□□□□□ -1.4
C11orf88-204ENST00000529661 GPR42O15529 346 aa6.32□□□□□ -1.4
C11orf88-204ENST00000529661 F2P00734 622 aa6.32□□□□□ -1.4
C11orf88-204ENST00000529661 PRLP01236 227 aa6.32□□□□□ -1.4
C11orf88-204ENST00000529661 CDKN1CP49918 316 aaPredicted RBP6.32□□□□□ -1.4
C11orf88-204ENST00000529661 PCOLCEQ15113 449 aa6.32□□□□□ -1.4
C11orf88-204ENST00000529661 RNF151Q2KHN1 245 aa6.32□□□□□ -1.4
C11orf88-204ENST00000529661 CREB3L3Q68CJ9 461 aa6.32□□□□□ -1.4
C11orf88-204ENST00000529661 TMEM200BQ69YZ2 307 aa6.32□□□□□ -1.4
C11orf88-204ENST00000529661 LEO1Q8WVC0 666 aaPredicted RBP6.32□□□□□ -1.4
C11orf88-204ENST00000529661 NEIL1Q96FI4 390 aaPredicted RBP6.32□□□□□ -1.4
C11orf88-204ENST00000529661 SAMD11Q96NU1 681 aa6.32□□□□□ -1.4
C11orf88-204ENST00000529661 GNRHR2Q96P88 292 aa6.32□□□□□ -1.4
C11orf88-204ENST00000529661 TUBGCP5Q96RT8 1024 aa6.32□□□□□ -1.4
C11orf88-204ENST00000529661 SEC61A2Q9H9S3 476 aa6.32□□□□□ -1.4
C11orf88-204ENST00000529661 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.32□□□□□ -1.4
C11orf88-204ENST00000529661 MAGEL2Q9UJ55 1249 aa6.32□□□□□ -1.4
C11orf88-204ENST00000529661 NR2E1Q9Y466 385 aa6.32□□□□□ -1.4
C11orf88-204ENST00000529661 SPO11Q9Y5K1 396 aa6.32□□□□□ -1.4
C11orf88-204ENST00000529661 PDGFRBP09619 1106 aa6.31□□□□□ -1.4
C11orf88-204ENST00000529661 MAGEA10P43363 369 aaPredicted RBP6.31□□□□□ -1.4
C11orf88-204ENST00000529661 MRE11P49959 708 aa6.31□□□□□ -1.4
C11orf88-204ENST00000529661 DSG1Q02413 1049 aa6.31□□□□□ -1.4
C11orf88-204ENST00000529661 SART3Q15020 963 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms