RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 LARP4BQ92615 738 aaKnown RBP14.29□□□□□ -0.12
RBM39-243ENST00000528062 SH3GL2Q99962 352 aa14.29□□□□□ -0.12
RBM39-243ENST00000528062 RBPJLQ9UBG7 517 aa14.29□□□□□ -0.12
RBM39-243ENST00000528062 PVALEFA0A1B0GWK0 134 aa14.29□□□□□ -0.12
RBM39-243ENST00000528062 PJA2O43164 708 aa14.29□□□□□ -0.12
RBM39-243ENST00000528062 BUB1O43683 1085 aa14.29□□□□□ -0.12
RBM39-243ENST00000528062 TCP1P17987 556 aaKnown RBP14.29□□□□□ -0.12
RBM39-243ENST00000528062 MAGEA9P43362 315 aa14.29□□□□□ -0.12
RBM39-243ENST00000528062 IRAK1P51617 712 aa14.29□□□□□ -0.12
RBM39-243ENST00000528062 SREBF2Q12772 1141 aa14.29□□□□□ -0.12
RBM39-243ENST00000528062 PDXDC1Q6P996 788 aa14.29□□□□□ -0.12
RBM39-243ENST00000528062 MS4A14Q96JA4 679 aa14.29□□□□□ -0.12
RBM39-243ENST00000528062 RBM12Q9NTZ6 932 aaKnown RBP14.29□□□□□ -0.12
RBM39-243ENST00000528062 INHBEP58166 350 aa14.28□□□□□ -0.12
RBM39-243ENST00000528062 EHHADHQ08426 723 aa14.28□□□□□ -0.12
RBM39-243ENST00000528062 CALCRLQ16602 461 aa14.28□□□□□ -0.12
RBM39-243ENST00000528062 KLHDC7AQ5VTJ3 777 aa14.28□□□□□ -0.12
RBM39-243ENST00000528062 CCDC70Q6NSX1 233 aa14.28□□□□□ -0.12
RBM39-243ENST00000528062 CCDC174Q6PII3 467 aa14.28□□□□□ -0.12
RBM39-243ENST00000528062 AGBL1Q96MI9 1066 aa14.28□□□□□ -0.12
RBM39-243ENST00000528062 ALS2CR12Q96Q35 445 aa14.28□□□□□ -0.12
RBM39-243ENST00000528062 STIM2Q9P246 746 aa14.28□□□□□ -0.12
RBM39-243ENST00000528062 RIPK3Q9Y572 518 aa14.28□□□□□ -0.12
RBM39-243ENST00000528062 PNMA6FA0A0J9YX94 578 aa14.27□□□□□ -0.12
RBM39-243ENST00000528062 OPLAHO14841 1288 aa14.27□□□□□ -0.12
RBM39-243ENST00000528062 TLR2O60603 784 aa14.27□□□□□ -0.12
RBM39-243ENST00000528062 FXR2P51116 673 aaKnown RBP eCLIP14.27□□□□□ -0.127e-33■■□□□ 11.8
RBM39-243ENST00000528062 APBA1Q02410 837 aa14.27□□□□□ -0.12
RBM39-243ENST00000528062 ECM1Q16610 540 aa14.27□□□□□ -0.12
RBM39-243ENST00000528062 PACS2Q86VP3 889 aa14.27□□□□□ -0.12
RBM39-243ENST00000528062 DNAJC5GQ8N7S2 189 aa14.27□□□□□ -0.12
RBM39-243ENST00000528062 RAD54LQ92698 747 aa14.27□□□□□ -0.12
RBM39-243ENST00000528062 COA7Q96BR5 231 aa14.27□□□□□ -0.12
RBM39-243ENST00000528062 RABEP2Q9H5N1 569 aa14.27□□□□□ -0.12
RBM39-243ENST00000528062 RAVER2Q9HCJ3 691 aaKnown RBP14.27□□□□□ -0.12
RBM39-243ENST00000528062 HOXC10Q9NYD6 342 aa14.27□□□□□ -0.12
RBM39-243ENST00000528062 STK17AQ9UEE5 414 aa14.27□□□□□ -0.12
RBM39-243ENST00000528062 SEC63Q9UGP8 760 aaKnown RBP14.27□□□□□ -0.12
RBM39-243ENST00000528062 GRIN2DO15399 1336 aa14.27□□□□□ -0.12
RBM39-243ENST00000528062 ABCB11O95342 1321 aa14.27□□□□□ -0.12
RBM39-243ENST00000528062 DOCK3Q8IZD9 2030 aa14.27□□□□□ -0.12
RBM39-243ENST00000528062 OSBPP22059 807 aa14.27□□□□□ -0.13
RBM39-243ENST00000528062 LRRC63Q05C16 580 aa14.27□□□□□ -0.13
RBM39-243ENST00000528062 PABPC4Q13310 644 aaKnown RBP eCLIP14.27□□□□□ -0.131e-7■■■□□ 18.8
RBM39-243ENST00000528062 Q3C1V9 767 aa14.27□□□□□ -0.13
RBM39-243ENST00000528062 TTMPQ5BVD1 217 aa14.27□□□□□ -0.13
RBM39-243ENST00000528062 DDX12PQ92771 950 aa14.27□□□□□ -0.13
RBM39-243ENST00000528062 ARL8AQ96BM9 186 aa14.27□□□□□ -0.13
RBM39-243ENST00000528062 MGAMO43451 1857 aa14.27□□□□□ -0.13
RBM39-243ENST00000528062 NOL4O94818 638 aa14.26□□□□□ -0.13
RBM39-243ENST00000528062 ICAM1P05362 532 aa14.26□□□□□ -0.13
RBM39-243ENST00000528062 MAP2K2P36507 400 aa14.26□□□□□ -0.13
RBM39-243ENST00000528062 NOP2P46087 812 aaKnown RBP14.26□□□□□ -0.13
RBM39-243ENST00000528062 CRHR2Q13324 411 aa14.26□□□□□ -0.13
RBM39-243ENST00000528062 CCDC181Q5TID7 509 aa14.26□□□□□ -0.13
RBM39-243ENST00000528062 CPXCR1Q8N123 301 aa14.26□□□□□ -0.13
RBM39-243ENST00000528062 RUBCNQ92622 972 aa14.26□□□□□ -0.13
RBM39-243ENST00000528062 GJA10Q969M2 543 aa14.26□□□□□ -0.13
RBM39-243ENST00000528062 FGFBP2Q9BYJ0 223 aa14.26□□□□□ -0.13
RBM39-243ENST00000528062 NLRC4Q9NPP4 1024 aa14.26□□□□□ -0.13
RBM39-243ENST00000528062 PNMA3Q9UL41 463 aa14.26□□□□□ -0.13
RBM39-243ENST00000528062 PLXNB2O15031 1838 aa14.26□□□□□ -0.13
RBM39-243ENST00000528062 ESYT2A0FGR8 921 aa14.26□□□□□ -0.13
RBM39-243ENST00000528062 ZSCAN5CA6NGD5 496 aaPredicted RBP14.26□□□□□ -0.13
RBM39-243ENST00000528062 EPHB4P54760 987 aa14.26□□□□□ -0.13
RBM39-243ENST00000528062 USH1GQ495M9 461 aa14.26□□□□□ -0.13
RBM39-243ENST00000528062 ZCWPW2Q504Y3 356 aa14.26□□□□□ -0.13
RBM39-243ENST00000528062 DNAJC21Q5F1R6 531 aaKnown RBP14.26□□□□□ -0.13
RBM39-243ENST00000528062 TTC19Q6DKK2 380 aaPredicted RBP14.26□□□□□ -0.13
RBM39-243ENST00000528062 SNX29Q8TEQ0 813 aa14.26□□□□□ -0.13
RBM39-243ENST00000528062 CDK5RAP3Q96JB5 506 aa14.26□□□□□ -0.13
RBM39-243ENST00000528062 PARK7Q99497 189 aaKnown RBP14.26□□□□□ -0.13
RBM39-243ENST00000528062 ZNFX1Q9P2E3 1918 aaKnown RBP14.26□□□□□ -0.13
RBM39-243ENST00000528062 ATP2A1O14983 1001 aa14.25□□□□□ -0.13
RBM39-243ENST00000528062 GLI1P08151 1106 aa14.25□□□□□ -0.13
RBM39-243ENST00000528062 CCT5P48643 541 aa14.25□□□□□ -0.13
RBM39-243ENST00000528062 PPFIA1Q13136 1202 aa14.25□□□□□ -0.13
RBM39-243ENST00000528062 ORC2Q13416 577 aaPredicted RBP14.25□□□□□ -0.13
RBM39-243ENST00000528062 TAF1CQ15572 869 aaPredicted RBP14.25□□□□□ -0.13
RBM39-243ENST00000528062 TMEM119Q4V9L6 283 aa14.25□□□□□ -0.13
RBM39-243ENST00000528062 PAGR1Q9BTK6 254 aa14.25□□□□□ -0.13
RBM39-243ENST00000528062 SSU72P8A0A1W2PR75 194 aa14.25□□□□□ -0.13
RBM39-243ENST00000528062 RBAK-RBAKDNI3L0D1 243 aa14.25□□□□□ -0.13
RBM39-243ENST00000528062 C8orf74Q6P047 294 aa14.25□□□□□ -0.13
RBM39-243ENST00000528062 EMBQ6PCB8 327 aa14.25□□□□□ -0.13
RBM39-243ENST00000528062 CACNA2D4Q7Z3S7 1137 aa14.25□□□□□ -0.13
RBM39-243ENST00000528062 CAVIN3Q969G5 261 aa14.25□□□□□ -0.13
RBM39-243ENST00000528062 DNAJC19Q96DA6 116 aa14.25□□□□□ -0.13
RBM39-243ENST00000528062 NOX5Q96PH1 765 aa14.25□□□□□ -0.13
RBM39-243ENST00000528062 CAPS2Q9BXY5 557 aa14.25□□□□□ -0.13
RBM39-243ENST00000528062 ESYT3A0FGR9 886 aa14.24□□□□□ -0.13
RBM39-243ENST00000528062 GOLGA8KD6RF30 607 aa14.24□□□□□ -0.13
RBM39-243ENST00000528062 FGFR1OPO95684 399 aaKnown RBP14.24□□□□□ -0.13
RBM39-243ENST00000528062 FAM153BP0C7A2 387 aa14.24□□□□□ -0.13
RBM39-243ENST00000528062 BCRP11274 1271 aa14.24□□□□□ -0.13
RBM39-243ENST00000528062 TNFRSF8P28908 595 aa14.24□□□□□ -0.13
RBM39-243ENST00000528062 PAFAH1B1P43034 410 aa14.24□□□□□ -0.13
RBM39-243ENST00000528062 DNA2P51530 1060 aa14.24□□□□□ -0.13
RBM39-243ENST00000528062 OAZ1P54368 228 aa14.24□□□□□ -0.13
RBM39-243ENST00000528062 FAM153CQ494X1 144 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms