RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 TTC3P53804 2025 aa15.99■□□□□ 0.15
CAPN1-212ENST00000527887 RBAK-RBAKDNI3L0D1 243 aa15.99■□□□□ 0.15
CAPN1-212ENST00000527887 GCFC2P16383 781 aaKnown RBP15.99■□□□□ 0.15
CAPN1-212ENST00000527887 FAM189BP81408 668 aa15.99■□□□□ 0.15
CAPN1-212ENST00000527887 PRKCEQ02156 737 aa15.99■□□□□ 0.15
CAPN1-212ENST00000527887 TMEM266Q2M3C6 531 aa15.99■□□□□ 0.15
CAPN1-212ENST00000527887 XKR3Q5GH77 459 aa15.99■□□□□ 0.15
CAPN1-212ENST00000527887 TCEAL5Q5H9L2 206 aa15.99■□□□□ 0.15
CAPN1-212ENST00000527887 PPP4R3AQ6IN85 833 aa15.99■□□□□ 0.15
CAPN1-212ENST00000527887 MIER3Q7Z3K6 550 aa15.99■□□□□ 0.15
CAPN1-212ENST00000527887 NEK9Q8TD19 979 aa15.99■□□□□ 0.15
CAPN1-212ENST00000527887 TMEM40Q8WWA1 233 aa15.99■□□□□ 0.15
CAPN1-212ENST00000527887 PPP2R3CQ969Q6 453 aa15.99■□□□□ 0.15
CAPN1-212ENST00000527887 FAM20AQ96MK3 541 aa15.99■□□□□ 0.15
CAPN1-212ENST00000527887 OSMRQ99650 979 aa15.99■□□□□ 0.15
CAPN1-212ENST00000527887 ADAM2Q99965 735 aa15.99■□□□□ 0.15
CAPN1-212ENST00000527887 LARP6Q9BRS8 491 aaKnown RBP15.99■□□□□ 0.15
CAPN1-212ENST00000527887 NIFKQ9BYG3 293 aaKnown RBP15.99■□□□□ 0.15
CAPN1-212ENST00000527887 UNC45AQ9H3U1 944 aa15.99■□□□□ 0.15
CAPN1-212ENST00000527887 DDX25Q9UHL0 483 aaKnown RBP15.99■□□□□ 0.15
CAPN1-212ENST00000527887 PLAGL2Q9UPG8 496 aa15.99■□□□□ 0.15
CAPN1-212ENST00000527887 AKT3Q9Y243 479 aa15.99■□□□□ 0.15
CAPN1-212ENST00000527887 FAM50BQ9Y247 325 aa15.99■□□□□ 0.15
CAPN1-212ENST00000527887 CCDC194A0A1B0GVG4 234 aa15.98■□□□□ 0.15
CAPN1-212ENST00000527887 C9IYK1 514 aa15.98■□□□□ 0.15
CAPN1-212ENST00000527887 CHMP2AO43633 222 aa15.98■□□□□ 0.15
CAPN1-212ENST00000527887 DKC1O60832 514 aaKnown RBP eCLIP15.98■□□□□ 0.15
CAPN1-212ENST00000527887 TDP2O95551 362 aa15.98■□□□□ 0.15
CAPN1-212ENST00000527887 MMP1P03956 469 aa15.98■□□□□ 0.15
CAPN1-212ENST00000527887 VTNP04004 478 aa15.98■□□□□ 0.15
CAPN1-212ENST00000527887 KCNA5P22460 613 aa15.98■□□□□ 0.15
CAPN1-212ENST00000527887 EIF4BP23588 611 aaKnown RBP15.98■□□□□ 0.15
CAPN1-212ENST00000527887 NLRP11P59045 1033 aaKnown RBP15.98■□□□□ 0.15
CAPN1-212ENST00000527887 TBC1D8BQ0IIM8 1120 aa15.98■□□□□ 0.15
CAPN1-212ENST00000527887 TARBP2Q15633 366 aaKnown RBP15.98■□□□□ 0.15
CAPN1-212ENST00000527887 CSPP1Q1MSJ5 1256 aa15.98■□□□□ 0.15
CAPN1-212ENST00000527887 TRMT1LQ7Z2T5 733 aaKnown RBP15.98■□□□□ 0.15
CAPN1-212ENST00000527887 FAM228AQ86W67 206 aa15.98■□□□□ 0.15
CAPN1-212ENST00000527887 ETNPPLQ8TBG4 499 aa15.98■□□□□ 0.15
CAPN1-212ENST00000527887 JPH2Q9BR39 696 aaPredicted RBP15.98■□□□□ 0.15
CAPN1-212ENST00000527887 C1QTNF1Q9BXJ1 281 aa15.98■□□□□ 0.15
CAPN1-212ENST00000527887 ADAMTS10Q9H324 1103 aa15.98■□□□□ 0.15
CAPN1-212ENST00000527887 AAASQ9NRG9 546 aa15.98■□□□□ 0.15
CAPN1-212ENST00000527887 TMEM161AQ9NX61 479 aa15.98■□□□□ 0.15
CAPN1-212ENST00000527887 TPCN1Q9ULQ1 816 aa15.98■□□□□ 0.15
CAPN1-212ENST00000527887 MRPL42Q9Y6G3 142 aaKnown RBP15.98■□□□□ 0.15
CAPN1-212ENST00000527887 COL4A4P53420 1690 aaPredicted RBP15.98■□□□□ 0.15
CAPN1-212ENST00000527887 TBX3O15119 743 aa15.97■□□□□ 0.15
CAPN1-212ENST00000527887 GRM6O15303 877 aa15.97■□□□□ 0.15
CAPN1-212ENST00000527887 HOXA2O43364 376 aa15.97■□□□□ 0.15
CAPN1-212ENST00000527887 MGEA5O60502 916 aa15.97■□□□□ 0.15
CAPN1-212ENST00000527887 ZSCAN20P17040 1043 aaPredicted RBP15.97■□□□□ 0.15
CAPN1-212ENST00000527887 DNM2P50570 870 aa15.97■□□□□ 0.15
CAPN1-212ENST00000527887 CLCN3P51790 818 aa15.97■□□□□ 0.15
CAPN1-212ENST00000527887 NEK8Q86SG6 692 aa15.97■□□□□ 0.15
CAPN1-212ENST00000527887 EXOC8Q8IYI6 725 aa15.97■□□□□ 0.15
CAPN1-212ENST00000527887 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.97■□□□□ 0.15
CAPN1-212ENST00000527887 AIFM3Q96NN9 605 aa15.97■□□□□ 0.15
CAPN1-212ENST00000527887 NECAB3Q96P71 396 aaPredicted RBP15.97■□□□□ 0.15
CAPN1-212ENST00000527887 BACH2Q9BYV9 841 aa15.97■□□□□ 0.15
CAPN1-212ENST00000527887 ATP6V0A4Q9HBG4 840 aa15.97■□□□□ 0.15
CAPN1-212ENST00000527887 TSHZ2Q9NRE2 1034 aa15.97■□□□□ 0.15
CAPN1-212ENST00000527887 PPME1Q9Y570 386 aa15.97■□□□□ 0.15
CAPN1-212ENST00000527887 PCDHB12Q9Y5F1 795 aa15.97■□□□□ 0.15
CAPN1-212ENST00000527887 GRXCR2A6NFK2 248 aa15.96■□□□□ 0.15
CAPN1-212ENST00000527887 PSMC5P62195 406 aa15.96■□□□□ 0.15
CAPN1-212ENST00000527887 UBE3AQ05086 875 aa15.96■□□□□ 0.15
CAPN1-212ENST00000527887 DSC3Q14574 896 aa15.96■□□□□ 0.15
CAPN1-212ENST00000527887 UGCGQ16739 394 aa15.96■□□□□ 0.15
CAPN1-212ENST00000527887 INF2Q27J81 1249 aa15.96■□□□□ 0.15
CAPN1-212ENST00000527887 CTC1Q2NKJ3 1217 aa15.96■□□□□ 0.15
CAPN1-212ENST00000527887 LETM2Q2VYF4 491 aa15.96■□□□□ 0.15
CAPN1-212ENST00000527887 SPPL3Q8TCT6 385 aa15.96■□□□□ 0.15
CAPN1-212ENST00000527887 RSPH1Q8WYR4 309 aa15.96■□□□□ 0.15
CAPN1-212ENST00000527887 ORC3Q9UBD5 711 aaPredicted RBP15.96■□□□□ 0.15
CAPN1-212ENST00000527887 KCNJ14Q9UNX9 436 aa15.96■□□□□ 0.15
CAPN1-212ENST00000527887 IGKV6-21A0A0C4DH24 114 aa15.95■□□□□ 0.14
CAPN1-212ENST00000527887 DARSP14868 501 aaKnown RBP15.95■□□□□ 0.14
CAPN1-212ENST00000527887 GPC3P51654 580 aa15.95■□□□□ 0.14
CAPN1-212ENST00000527887 AK2P54819 239 aa15.95■□□□□ 0.14
CAPN1-212ENST00000527887 PPP2R5CQ13362 524 aa15.95■□□□□ 0.14
CAPN1-212ENST00000527887 PAN2Q504Q3 1202 aaKnown RBP15.95■□□□□ 0.14
CAPN1-212ENST00000527887 PTCRAQ6ISU1 281 aaPredicted RBP15.95■□□□□ 0.14
CAPN1-212ENST00000527887 LRRC71Q8N4P6 559 aa15.95■□□□□ 0.14
CAPN1-212ENST00000527887 INO80BQ9C086 356 aaPredicted RBP15.95■□□□□ 0.14
CAPN1-212ENST00000527887 BRMS1Q9HCU9 246 aa15.95■□□□□ 0.14
CAPN1-212ENST00000527887 KCNMB3Q9NPA1 279 aa15.95■□□□□ 0.14
CAPN1-212ENST00000527887 FSD2A1L4K1 749 aa15.94■□□□□ 0.14
CAPN1-212ENST00000527887 STBD1O95210 358 aa15.94■□□□□ 0.14
CAPN1-212ENST00000527887 ITGB1P05556 798 aa15.94■□□□□ 0.14
CAPN1-212ENST00000527887 P4HBP07237 508 aaKnown RBP15.94■□□□□ 0.14
CAPN1-212ENST00000527887 QARSP47897 775 aaKnown RBP15.94■□□□□ 0.14
CAPN1-212ENST00000527887 PDE12Q6L8Q7 609 aaKnown RBP15.94■□□□□ 0.14
CAPN1-212ENST00000527887 FAM178BQ8IXR5 827 aa15.94■□□□□ 0.14
CAPN1-212ENST00000527887 KLHL23Q8NBE8 558 aa15.94■□□□□ 0.14
CAPN1-212ENST00000527887 GJA10Q969M2 543 aa15.94■□□□□ 0.14
CAPN1-212ENST00000527887 CEP89Q96ST8 783 aa15.94■□□□□ 0.14
CAPN1-212ENST00000527887 GCOM2Q9BZD3 368 aaPredicted RBP15.94■□□□□ 0.14
CAPN1-212ENST00000527887 TMEM117Q9H0C3 514 aa15.94■□□□□ 0.14
CAPN1-212ENST00000527887 ALG13Q9NP73 1137 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms