RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.62□□□□□ -0.232e-7■■■□□ 16.5
CAPN1-208ENST00000527323 NEUROG2Q9H2A3 272 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 GANQ9H2C0 597 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 DNAJC18Q9H819 358 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 VCPKMTQ9H867 229 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 ARMCX3Q9UH62 379 aaPredicted RBP13.62□□□□□ -0.23
CAPN1-208ENST00000527323 TMEM59LQ9UK28 342 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 POTEB3A0JP26 581 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 POTECB2RU33 542 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 FLOT1O75955 427 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 FLT3P36888 993 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 DHX9Q08211 1270 aaKnown RBP13.62□□□□□ -0.23
CAPN1-208ENST00000527323 BIRC3Q13489 604 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 PRPF4BQ13523 1007 aaKnown RBP13.62□□□□□ -0.23
CAPN1-208ENST00000527323 DLGAP5Q15398 846 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 EXOC3L4Q17RC7 722 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 POTEBQ6S5H4 581 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 DAAM2Q86T65 1068 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 VPS36Q86VN1 386 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 ACTRT1Q8TDG2 376 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 DDX20Q9UHI6 824 aaKnown RBP13.62□□□□□ -0.23
CAPN1-208ENST00000527323 NAGPAQ9UK23 515 aa13.62□□□□□ -0.23
CAPN1-208ENST00000527323 MYBP10242 640 aa13.61□□□□□ -0.23
CAPN1-208ENST00000527323 UCHL3P15374 230 aa13.61□□□□□ -0.23
CAPN1-208ENST00000527323 MRPL12P52815 198 aaKnown RBP13.61□□□□□ -0.23
CAPN1-208ENST00000527323 MAGOHP61326 146 aaKnown RBP13.61□□□□□ -0.23
CAPN1-208ENST00000527323 PPP2R2AP63151 447 aa13.61□□□□□ -0.23
CAPN1-208ENST00000527323 MTMR3Q13615 1198 aa13.61□□□□□ -0.23
CAPN1-208ENST00000527323 RSBN1LQ6PCB5 846 aaPredicted RBP13.61□□□□□ -0.23
CAPN1-208ENST00000527323 IRF2BP2Q7Z5L9 587 aa13.61□□□□□ -0.23
CAPN1-208ENST00000527323 MAGOHBQ96A72 148 aaKnown RBP13.61□□□□□ -0.23
CAPN1-208ENST00000527323 CSRNP1Q96S65 589 aa13.61□□□□□ -0.23
CAPN1-208ENST00000527323 SPON1Q9HCB6 807 aa13.61□□□□□ -0.23
CAPN1-208ENST00000527323 ZNRF3Q9ULT6 936 aa13.61□□□□□ -0.23
CAPN1-208ENST00000527323 BZW2Q9Y6E2 419 aaKnown RBP13.61□□□□□ -0.23
CAPN1-208ENST00000527323 ZNF541Q9H0D2 1346 aa13.61□□□□□ -0.23
CAPN1-208ENST00000527323 DNAH12Q6ZR08 3092 aa13.61□□□□□ -0.23
CAPN1-208ENST00000527323 hCG_1984214I3L0E3 225 aa13.61□□□□□ -0.23
CAPN1-208ENST00000527323 H2AFZP0C0S5 128 aa13.61□□□□□ -0.23
CAPN1-208ENST00000527323 FOXR2Q6PJQ5 311 aa13.61□□□□□ -0.23
CAPN1-208ENST00000527323 KCTD1Q719H9 257 aa13.61□□□□□ -0.23
CAPN1-208ENST00000527323 H2AFVQ71UI9 128 aa13.61□□□□□ -0.23
CAPN1-208ENST00000527323 ZNF713Q8N859 430 aaPredicted RBP13.61□□□□□ -0.23
CAPN1-208ENST00000527323 U2AF1L4Q8WU68 220 aaKnown RBP13.61□□□□□ -0.23
CAPN1-208ENST00000527323 PAGR1Q9BTK6 254 aa13.61□□□□□ -0.23
CAPN1-208ENST00000527323 UTP11Q9Y3A2 253 aaKnown RBP13.61□□□□□ -0.23
CAPN1-208ENST00000527323 NRXN2Q9P2S2 1712 aa13.61□□□□□ -0.23
CAPN1-208ENST00000527323 GAKO14976 1311 aa13.61□□□□□ -0.23
CAPN1-208ENST00000527323 KDM3AQ9Y4C1 1321 aa13.61□□□□□ -0.23
CAPN1-208ENST00000527323 CHUKO15111 745 aa13.6□□□□□ -0.23
CAPN1-208ENST00000527323 TTI1O43156 1089 aa13.6□□□□□ -0.23
CAPN1-208ENST00000527323 SMTNP53814 917 aa13.6□□□□□ -0.23
CAPN1-208ENST00000527323 SF3A3Q12874 501 aaKnown RBP eCLIP13.6□□□□□ -0.238e-10■■■■□ 21.2
CAPN1-208ENST00000527323 TTBK2Q6IQ55 1244 aa13.6□□□□□ -0.23
CAPN1-208ENST00000527323 CACNA2D3Q8IZS8 1091 aa13.6□□□□□ -0.23
CAPN1-208ENST00000527323 TPCN2Q8NHX9 752 aa13.6□□□□□ -0.23
CAPN1-208ENST00000527323 CUL5Q93034 780 aa13.6□□□□□ -0.23
CAPN1-208ENST00000527323 CELF4Q9BZC1 486 aaKnown RBP13.6□□□□□ -0.23
CAPN1-208ENST00000527323 GOPCQ9HD26 462 aa13.6□□□□□ -0.23
CAPN1-208ENST00000527323 SLC40A1Q9NP59 571 aa13.6□□□□□ -0.23
CAPN1-208ENST00000527323 SERPINB13Q9UIV8 391 aa13.6□□□□□ -0.23
CAPN1-208ENST00000527323 H0YGN5 161 aa13.6□□□□□ -0.23
CAPN1-208ENST00000527323 CES2O00748 559 aa13.6□□□□□ -0.23
CAPN1-208ENST00000527323 DDNO94850 711 aaPredicted RBP13.6□□□□□ -0.23
CAPN1-208ENST00000527323 AFPP02771 609 aaKnown RBP13.6□□□□□ -0.23
CAPN1-208ENST00000527323 HMGB2P26583 209 aaKnown RBP13.6□□□□□ -0.23
CAPN1-208ENST00000527323 ECHS1P30084 290 aa13.6□□□□□ -0.23
CAPN1-208ENST00000527323 GMPSP49915 693 aaPredicted RBP13.6□□□□□ -0.23
CAPN1-208ENST00000527323 ASPRV1Q53RT3 343 aa13.6□□□□□ -0.23
CAPN1-208ENST00000527323 ADAT2Q7Z6V5 191 aaKnown RBP13.6□□□□□ -0.23
CAPN1-208ENST00000527323 CEP57Q86XR8 500 aa13.6□□□□□ -0.23
CAPN1-208ENST00000527323 SYT17Q9BSW7 474 aa13.6□□□□□ -0.23
CAPN1-208ENST00000527323 KCTD10Q9H3F6 313 aa13.6□□□□□ -0.23
CAPN1-208ENST00000527323 PSTPIP2Q9H939 334 aa13.6□□□□□ -0.23
CAPN1-208ENST00000527323 NFS1Q9Y697 457 aa13.6□□□□□ -0.23
CAPN1-208ENST00000527323 PNMA6FA0A0J9YX94 578 aa13.6□□□□□ -0.23
CAPN1-208ENST00000527323 CCDC188H7C350 402 aa13.6□□□□□ -0.23
CAPN1-208ENST00000527323 TRAPPC3O43617 180 aa13.6□□□□□ -0.23
CAPN1-208ENST00000527323 XRCC5P13010 732 aaKnown RBP13.6□□□□□ -0.23
CAPN1-208ENST00000527323 YBX3P16989 372 aaKnown RBP eCLIP13.6□□□□□ -0.235e-7■■□□□ 12.9
CAPN1-208ENST00000527323 CYP11B2P19099 503 aa13.6□□□□□ -0.23
CAPN1-208ENST00000527323 STAT3P40763 770 aa13.6□□□□□ -0.23
CAPN1-208ENST00000527323 QPCTQ16769 361 aa13.6□□□□□ -0.23
CAPN1-208ENST00000527323 EIF1ADQ8N9N8 165 aaKnown RBP13.6□□□□□ -0.23
CAPN1-208ENST00000527323 RAPGEF5Q92565 580 aa13.6□□□□□ -0.23
CAPN1-208ENST00000527323 SEC16BQ96JE7 1060 aa13.6□□□□□ -0.23
CAPN1-208ENST00000527323 CALR3Q96L12 384 aaKnown RBP13.6□□□□□ -0.23
CAPN1-208ENST00000527323 CXorf56Q9H5V9 222 aa13.6□□□□□ -0.23
CAPN1-208ENST00000527323 CNOT8Q9UFF9 292 aaKnown RBP13.6□□□□□ -0.23
CAPN1-208ENST00000527323 ATP8A1Q9Y2Q0 1164 aa13.6□□□□□ -0.23
CAPN1-208ENST00000527323 PHF20L1A8MW92 1017 aa13.59□□□□□ -0.23
CAPN1-208ENST00000527323 MARSP56192 900 aaKnown RBP13.59□□□□□ -0.23
CAPN1-208ENST00000527323 TGFB2P61812 414 aa13.59□□□□□ -0.23
CAPN1-208ENST00000527323 CIAPIN1Q6FI81 312 aa13.59□□□□□ -0.23
CAPN1-208ENST00000527323 MICALL2Q8IY33 904 aa13.59□□□□□ -0.23
CAPN1-208ENST00000527323 ADGRF4Q8IZF3 695 aa13.59□□□□□ -0.23
CAPN1-208ENST00000527323 GIMAP7Q8NHV1 300 aa13.59□□□□□ -0.23
CAPN1-208ENST00000527323 GGA2Q9UJY4 613 aa13.59□□□□□ -0.23
CAPN1-208ENST00000527323 TLDC2A0PJX2 215 aa13.59□□□□□ -0.23
CAPN1-208ENST00000527323 MEIS1O00470 390 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms