RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 USP38Q8NB14 1042 aa12.56□□□□□ -0.4
CTSB-214ENST00000527243 TMEM40Q8WWA1 233 aa12.56□□□□□ -0.4
CTSB-214ENST00000527243 LINC01599Q8WXQ3 324 aa12.56□□□□□ -0.4
CTSB-214ENST00000527243 SH2D3AQ9BRG2 576 aa12.56□□□□□ -0.4
CTSB-214ENST00000527243 SEMA6BQ9H3T3 888 aa12.56□□□□□ -0.4
CTSB-214ENST00000527243 DHX33Q9H6R0 707 aaKnown RBP12.56□□□□□ -0.4
CTSB-214ENST00000527243 CYP26B1Q9NR63 512 aa12.56□□□□□ -0.4
CTSB-214ENST00000527243 PCDHA11Q9Y5I1 949 aa12.56□□□□□ -0.4
CTSB-214ENST00000527243 CHD7Q9P2D1 2997 aa12.56□□□□□ -0.4
CTSB-214ENST00000527243 ZBTB39O15060 712 aa12.55□□□□□ -0.4
CTSB-214ENST00000527243 GJB5O95377 273 aa12.55□□□□□ -0.4
CTSB-214ENST00000527243 VTNP04004 478 aa12.55□□□□□ -0.4
CTSB-214ENST00000527243 PDCP20941 246 aa12.55□□□□□ -0.4
CTSB-214ENST00000527243 SYT1P21579 422 aa12.55□□□□□ -0.4
CTSB-214ENST00000527243 CD52P31358 61 aa12.55□□□□□ -0.4
CTSB-214ENST00000527243 YWHABP31946 246 aaKnown RBP12.55□□□□□ -0.4
CTSB-214ENST00000527243 PRPHP41219 470 aa12.55□□□□□ -0.4
CTSB-214ENST00000527243 ATP2C1P98194 919 aaPredicted RBP12.55□□□□□ -0.4
CTSB-214ENST00000527243 IL17AQ16552 155 aa12.55□□□□□ -0.4
CTSB-214ENST00000527243 FAM43BQ6ZT52 329 aaPredicted RBP12.55□□□□□ -0.4
CTSB-214ENST00000527243 ZNF710Q8N1W2 664 aa12.55□□□□□ -0.4
CTSB-214ENST00000527243 METTL13Q8N6R0 699 aa12.55□□□□□ -0.4
CTSB-214ENST00000527243 IGSF22Q8N9C0 903 aa12.55□□□□□ -0.4
CTSB-214ENST00000527243 TIFAQ96CG3 184 aa12.55□□□□□ -0.4
CTSB-214ENST00000527243 GUCD1Q96NT3 240 aa12.55□□□□□ -0.4
CTSB-214ENST00000527243 POLR3CQ9BUI4 534 aaPredicted RBP12.55□□□□□ -0.4
CTSB-214ENST00000527243 TMX1Q9H3N1 280 aa12.55□□□□□ -0.4
CTSB-214ENST00000527243 ERVK-5Q9HDB9 667 aa12.55□□□□□ -0.4
CTSB-214ENST00000527243 M0QZ92 97 aa12.54□□□□□ -0.4
CTSB-214ENST00000527243 LAD1O00515 517 aa12.54□□□□□ -0.4
CTSB-214ENST00000527243 MED24O75448 989 aa12.54□□□□□ -0.4
CTSB-214ENST00000527243 ARHGEF15O94989 841 aa12.54□□□□□ -0.4
CTSB-214ENST00000527243 XRCC6P12956 609 aaKnown RBP eCLIP12.54□□□□□ -0.4
CTSB-214ENST00000527243 MYOGP15173 224 aa12.54□□□□□ -0.4
CTSB-214ENST00000527243 TMOD1P28289 359 aa12.54□□□□□ -0.4
CTSB-214ENST00000527243 TECP42680 631 aa12.54□□□□□ -0.4
CTSB-214ENST00000527243 KCNJ6P48051 423 aa12.54□□□□□ -0.4
CTSB-214ENST00000527243 GPC3P51654 580 aa12.54□□□□□ -0.4
CTSB-214ENST00000527243 CRYBB1P53674 252 aaPredicted RBP12.54□□□□□ -0.4
CTSB-214ENST00000527243 KIZQ2M2Z5 673 aa12.54□□□□□ -0.4
CTSB-214ENST00000527243 ZNF697Q5TEC3 545 aa12.54□□□□□ -0.4
CTSB-214ENST00000527243 BRAPQ7Z569 592 aa12.54□□□□□ -0.4
CTSB-214ENST00000527243 TMCO2Q7Z6W1 182 aaPredicted RBP12.54□□□□□ -0.4
CTSB-214ENST00000527243 RTN4RL1Q86UN2 441 aaPredicted RBP12.54□□□□□ -0.4
CTSB-214ENST00000527243 CATSPER3Q86XQ3 398 aa12.54□□□□□ -0.4
CTSB-214ENST00000527243 TPH2Q8IWU9 490 aa12.54□□□□□ -0.4
CTSB-214ENST00000527243 CRIPAKQ8N1N5 446 aa12.54□□□□□ -0.4
CTSB-214ENST00000527243 MAP7D2Q96T17 732 aa12.54□□□□□ -0.4
CTSB-214ENST00000527243 TUFT1Q9NNX1 390 aa12.54□□□□□ -0.4
CTSB-214ENST00000527243 XPNPEP1Q9NQW7 623 aa12.54□□□□□ -0.4
CTSB-214ENST00000527243 ANKEF1Q9NU02 776 aa12.54□□□□□ -0.4
CTSB-214ENST00000527243 PADI3Q9ULW8 664 aa12.54□□□□□ -0.4
CTSB-214ENST00000527243 MTMR6Q9Y217 621 aa12.54□□□□□ -0.4
CTSB-214ENST00000527243 NOC2LQ9Y3T9 749 aaKnown RBP12.54□□□□□ -0.4
CTSB-214ENST00000527243 PTPRSQ13332 1948 aa12.54□□□□□ -0.4
CTSB-214ENST00000527243 MICAL3Q7RTP6 2002 aa12.54□□□□□ -0.4
CTSB-214ENST00000527243 EVPLQ92817 2033 aa12.54□□□□□ -0.4
CTSB-214ENST00000527243 ENPP3O14638 875 aa12.53□□□□□ -0.4
CTSB-214ENST00000527243 RPA1P27694 616 aa12.53□□□□□ -0.4
CTSB-214ENST00000527243 RFC5P40937 340 aa12.53□□□□□ -0.4
CTSB-214ENST00000527243 RARRES1P49788 294 aa12.53□□□□□ -0.4
CTSB-214ENST00000527243 NLRP11P59045 1033 aaKnown RBP12.53□□□□□ -0.4
CTSB-214ENST00000527243 HTRA4P83105 476 aaPredicted RBP12.53□□□□□ -0.4
CTSB-214ENST00000527243 RESTQ13127 1097 aa12.53□□□□□ -0.4
CTSB-214ENST00000527243 PDIA5Q14554 519 aa12.53□□□□□ -0.4
CTSB-214ENST00000527243 FAM228AQ86W67 206 aa12.53□□□□□ -0.4
CTSB-214ENST00000527243 TOP1MTQ969P6 601 aa12.53□□□□□ -0.4
CTSB-214ENST00000527243 CEP170P1Q96L14 293 aa12.53□□□□□ -0.4
CTSB-214ENST00000527243 OSMRQ99650 979 aa12.53□□□□□ -0.4
CTSB-214ENST00000527243 JPH2Q9BR39 696 aaPredicted RBP12.53□□□□□ -0.4
CTSB-214ENST00000527243 TSPYL2Q9H2G4 693 aaPredicted RBP12.53□□□□□ -0.4
CTSB-214ENST00000527243 NKX2-4Q9H2Z4 354 aa12.53□□□□□ -0.4
CTSB-214ENST00000527243 ZNF576Q9H609 170 aa12.53□□□□□ -0.4
CTSB-214ENST00000527243 SUGCTQ9HAC7 445 aa12.53□□□□□ -0.4
CTSB-214ENST00000527243 MSRAQ9UJ68 235 aa12.53□□□□□ -0.4
CTSB-214ENST00000527243 LCHNA4D1U4 455 aa12.52□□□□□ -0.41
CTSB-214ENST00000527243 MGEA5O60502 916 aa12.52□□□□□ -0.41
CTSB-214ENST00000527243 AMHP03971 560 aa12.52□□□□□ -0.41
CTSB-214ENST00000527243 DARSP14868 501 aaKnown RBP12.52□□□□□ -0.41
CTSB-214ENST00000527243 MUTP22033 750 aa12.52□□□□□ -0.41
CTSB-214ENST00000527243 EIF4BP23588 611 aaKnown RBP12.52□□□□□ -0.41
CTSB-214ENST00000527243 DSC3Q14574 896 aa12.52□□□□□ -0.41
CTSB-214ENST00000527243 ECM1Q16610 540 aa12.52□□□□□ -0.41
CTSB-214ENST00000527243 TMEM266Q2M3C6 531 aa12.52□□□□□ -0.41
CTSB-214ENST00000527243 XKR9Q5GH70 373 aa12.52□□□□□ -0.41
CTSB-214ENST00000527243 OTUD6AQ7L8S5 288 aa12.52□□□□□ -0.41
CTSB-214ENST00000527243 SP7Q8TDD2 431 aaPredicted RBP12.52□□□□□ -0.41
CTSB-214ENST00000527243 PPP1R16BQ96T49 567 aa12.52□□□□□ -0.41
CTSB-214ENST00000527243 RAD9AQ99638 391 aa12.52□□□□□ -0.41
CTSB-214ENST00000527243 MMTAG2Q9BU76 263 aaKnown RBP12.52□□□□□ -0.41
CTSB-214ENST00000527243 FTHL17Q9BXU8 183 aa12.52□□□□□ -0.41
CTSB-214ENST00000527243 RC3H2Q9HBD1 1191 aaKnown RBP12.52□□□□□ -0.41
CTSB-214ENST00000527243 AKT3Q9Y243 479 aa12.52□□□□□ -0.41
CTSB-214ENST00000527243 TTC3P53804 2025 aa12.52□□□□□ -0.41
CTSB-214ENST00000527243 CDH23Q9H251 3354 aa12.52□□□□□ -0.41
CTSB-214ENST00000527243 A0A087WWV3 80 aa12.51□□□□□ -0.41
CTSB-214ENST00000527243 VPS37CA5D8V6 355 aaPredicted RBP12.51□□□□□ -0.41
CTSB-214ENST00000527243 GAS2O43903 313 aaKnown RBP12.51□□□□□ -0.41
CTSB-214ENST00000527243 RPS6KA5O75582 802 aa12.51□□□□□ -0.41
CTSB-214ENST00000527243 CA3P07451 260 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms