RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 TRIM39Q9HCM9 518 aa13.24□□□□□ -0.29
FGFR1-227ENST00000526570 NLRC4Q9NPP4 1024 aa13.24□□□□□ -0.29
FGFR1-227ENST00000526570 DNAJC17Q9NVM6 304 aaKnown RBP13.24□□□□□ -0.29
FGFR1-227ENST00000526570 NARFQ9UHQ1 456 aa13.24□□□□□ -0.29
FGFR1-227ENST00000526570 PASKQ96RG2 1323 aa13.24□□□□□ -0.29
FGFR1-227ENST00000526570 SMCO2A6NFE2 343 aa13.24□□□□□ -0.29
FGFR1-227ENST00000526570 KRT6AP02538 564 aa13.24□□□□□ -0.29
FGFR1-227ENST00000526570 KRT6BP04259 564 aa13.24□□□□□ -0.29
FGFR1-227ENST00000526570 KRT6CP48668 564 aa13.24□□□□□ -0.29
FGFR1-227ENST00000526570 RASA3Q14644 834 aa13.24□□□□□ -0.29
FGFR1-227ENST00000526570 RARS2Q5T160 578 aaKnown RBP13.24□□□□□ -0.29
FGFR1-227ENST00000526570 ELMSAN1Q6PJG2 1045 aa13.24□□□□□ -0.29
FGFR1-227ENST00000526570 MAEAQ7L5Y9 396 aa13.24□□□□□ -0.29
FGFR1-227ENST00000526570 NRDE2Q9H7Z3 1164 aa13.24□□□□□ -0.29
FGFR1-227ENST00000526570 RTEL1Q9NZ71 1219 aa13.24□□□□□ -0.29
FGFR1-227ENST00000526570 H0Y626 953 aa13.24□□□□□ -0.29
FGFR1-227ENST00000526570 XPOTO43592 962 aaKnown RBP13.24□□□□□ -0.29
FGFR1-227ENST00000526570 S100A1P23297 94 aa13.24□□□□□ -0.29
FGFR1-227ENST00000526570 CALCRLQ16602 461 aa13.24□□□□□ -0.29
FGFR1-227ENST00000526570 ABCB5Q2M3G0 1257 aa13.24□□□□□ -0.29
FGFR1-227ENST00000526570 DAB2IPQ5VWQ8 1189 aa13.24□□□□□ -0.29
FGFR1-227ENST00000526570 TTLL6Q8N841 843 aa13.24□□□□□ -0.29
FGFR1-227ENST00000526570 HNRNPLLQ8WVV9 542 aaKnown RBP13.24□□□□□ -0.29
FGFR1-227ENST00000526570 BRD8Q9H0E9 1235 aa13.24□□□□□ -0.29
FGFR1-227ENST00000526570 LAMC1P11047 1609 aa13.24□□□□□ -0.29
FGFR1-227ENST00000526570 USP31Q70CQ4 1352 aa13.24□□□□□ -0.29
FGFR1-227ENST00000526570 KCNB1Q14721 858 aa13.23□□□□□ -0.29
FGFR1-227ENST00000526570 CYTH1Q15438 398 aa13.23□□□□□ -0.29
FGFR1-227ENST00000526570 CEP78Q5JTW2 689 aa13.23□□□□□ -0.29
FGFR1-227ENST00000526570 NOP9Q86U38 636 aaKnown RBP13.23□□□□□ -0.29
FGFR1-227ENST00000526570 HEATR4Q86WZ0 1026 aa13.23□□□□□ -0.29
FGFR1-227ENST00000526570 PNMA1Q8ND90 353 aa13.23□□□□□ -0.29
FGFR1-227ENST00000526570 L2HGDHQ9H9P8 463 aa13.23□□□□□ -0.29
FGFR1-227ENST00000526570 C21orf2O43822 256 aa13.23□□□□□ -0.29
FGFR1-227ENST00000526570 KCNJ6P48051 423 aa13.23□□□□□ -0.29
FGFR1-227ENST00000526570 TBC1D9BQ66K14 1250 aa13.23□□□□□ -0.29
FGFR1-227ENST00000526570 CSRNP1Q96S65 589 aa13.23□□□□□ -0.29
FGFR1-227ENST00000526570 PCDHA5Q9Y5H7 936 aa13.23□□□□□ -0.29
FGFR1-227ENST00000526570 MFAP3LO75121 409 aa13.23□□□□□ -0.29
FGFR1-227ENST00000526570 HAUS5O94927 633 aa13.23□□□□□ -0.29
FGFR1-227ENST00000526570 CYP19A1P11511 503 aaPredicted RBP13.23□□□□□ -0.29
FGFR1-227ENST00000526570 ALAS1P13196 640 aa13.23□□□□□ -0.29
FGFR1-227ENST00000526570 SPATA21Q7Z572 469 aa13.23□□□□□ -0.29
FGFR1-227ENST00000526570 REXO1Q8N1G1 1221 aaKnown RBP13.23□□□□□ -0.29
FGFR1-227ENST00000526570 MSL3Q8N5Y2 521 aaKnown RBP13.23□□□□□ -0.29
FGFR1-227ENST00000526570 QKIQ96PU8 341 aaKnown RBP eCLIP13.23□□□□□ -0.292e-10■■□□□ 11.5
FGFR1-227ENST00000526570 ARHGAP26Q9UNA1 814 aa13.23□□□□□ -0.29
FGFR1-227ENST00000526570 ARHGEF35A5YM69 484 aa13.23□□□□□ -0.29
FGFR1-227ENST00000526570 H7C1W4 665 aa13.23□□□□□ -0.29
FGFR1-227ENST00000526570 ZBTB7AO95365 584 aa13.23□□□□□ -0.29
FGFR1-227ENST00000526570 ART3Q13508 389 aa13.23□□□□□ -0.29
FGFR1-227ENST00000526570 TEDDM1Q5T9Z0 273 aa13.23□□□□□ -0.29
FGFR1-227ENST00000526570 OTUD6AQ7L8S5 288 aa13.23□□□□□ -0.29
FGFR1-227ENST00000526570 CATSPER3Q86XQ3 398 aa13.23□□□□□ -0.29
FGFR1-227ENST00000526570 CCDC103Q8IW40 242 aa13.23□□□□□ -0.29
FGFR1-227ENST00000526570 TNIP2Q8NFZ5 429 aa13.23□□□□□ -0.29
FGFR1-227ENST00000526570 ZMYND12Q9H0C1 365 aa13.23□□□□□ -0.29
FGFR1-227ENST00000526570 SUGCTQ9HAC7 445 aa13.23□□□□□ -0.29
FGFR1-227ENST00000526570 RIMS1Q86UR5 1692 aaKnown RBP13.23□□□□□ -0.29
FGFR1-227ENST00000526570 GPC4O75487 556 aa13.23□□□□□ -0.29
FGFR1-227ENST00000526570 PLTPP55058 493 aa13.23□□□□□ -0.29
FGFR1-227ENST00000526570 PREPLQ4J6C6 727 aaPredicted RBP13.23□□□□□ -0.29
FGFR1-227ENST00000526570 ZCWPW2Q504Y3 356 aa13.23□□□□□ -0.29
FGFR1-227ENST00000526570 FAM47EQ6ZV65 393 aa13.23□□□□□ -0.29
FGFR1-227ENST00000526570 ARHGEF1Q92888 912 aaKnown RBP13.23□□□□□ -0.29
FGFR1-227ENST00000526570 MED23Q9ULK4 1368 aa13.22□□□□□ -0.29
FGFR1-227ENST00000526570 LRRIQ1Q96JM4 1722 aa13.22□□□□□ -0.29
FGFR1-227ENST00000526570 EN1Q05925 392 aaPredicted RBP13.22□□□□□ -0.29
FGFR1-227ENST00000526570 ZMYM1Q5SVZ6 1142 aa13.22□□□□□ -0.29
FGFR1-227ENST00000526570 MCRS1Q96EZ8 462 aa13.22□□□□□ -0.29
FGFR1-227ENST00000526570 SNX25Q9H3E2 840 aa13.22□□□□□ -0.29
FGFR1-227ENST00000526570 AZI2Q9H6S1 392 aa13.22□□□□□ -0.29
FGFR1-227ENST00000526570 GINS2Q9Y248 185 aa13.22□□□□□ -0.29
FGFR1-227ENST00000526570 POC1B-GALNT4F8VUJ3 575 aa13.22□□□□□ -0.29
FGFR1-227ENST00000526570 MYBL1P10243 752 aa13.22□□□□□ -0.29
FGFR1-227ENST00000526570 ADARP55265 1226 aaKnown RBP13.22□□□□□ -0.29
FGFR1-227ENST00000526570 CLIC6Q96NY7 704 aa13.22□□□□□ -0.29
FGFR1-227ENST00000526570 FBXL5Q9UKA1 691 aa13.22□□□□□ -0.29
FGFR1-227ENST00000526570 AFG3L2Q9Y4W6 797 aa13.22□□□□□ -0.29
FGFR1-227ENST00000526570 RPL13P26373 211 aaKnown RBP13.22□□□□□ -0.29
FGFR1-227ENST00000526570 PPP2R5CQ13362 524 aa13.22□□□□□ -0.29
FGFR1-227ENST00000526570 KRT81Q14533 505 aa13.22□□□□□ -0.29
FGFR1-227ENST00000526570 ATG16L1Q676U5 607 aa13.22□□□□□ -0.29
FGFR1-227ENST00000526570 AGGF1Q8N302 714 aaeCLIP13.22□□□□□ -0.29
FGFR1-227ENST00000526570 GABPB2Q8TAK5 448 aaPredicted RBP13.22□□□□□ -0.29
FGFR1-227ENST00000526570 ATP8A2Q9NTI2 1148 aa13.22□□□□□ -0.29
FGFR1-227ENST00000526570 EURLQ9NYK6 297 aa13.22□□□□□ -0.29
FGFR1-227ENST00000526570 C6orf203Q9P0P8 240 aaPredicted RBP13.22□□□□□ -0.29
FGFR1-227ENST00000526570 STAP2Q9UGK3 403 aa13.22□□□□□ -0.29
FGFR1-227ENST00000526570 FBXO9Q9UK97 447 aaPredicted RBP13.22□□□□□ -0.29
FGFR1-227ENST00000526570 AGLP35573 1532 aa13.22□□□□□ -0.29
FGFR1-227ENST00000526570 ATF2P15336 505 aa13.22□□□□□ -0.29
FGFR1-227ENST00000526570 ROR2Q01974 943 aaKnown RBP13.22□□□□□ -0.29
FGFR1-227ENST00000526570 ANKRD27Q96NW4 1050 aa13.22□□□□□ -0.29
FGFR1-227ENST00000526570 SAMSN1Q9NSI8 373 aaKnown RBP13.22□□□□□ -0.29
FGFR1-227ENST00000526570 CFLARO15519 480 aa13.21□□□□□ -0.29
FGFR1-227ENST00000526570 LRPAP1P30533 357 aa13.21□□□□□ -0.29
FGFR1-227ENST00000526570 SLFN13Q68D06 897 aa13.21□□□□□ -0.29
FGFR1-227ENST00000526570 RTKN2Q8IZC4 609 aa13.21□□□□□ -0.29
FGFR1-227ENST00000526570 BPIFA3Q9BQP9 254 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms