RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 CD52P31358 61 aa18.14■□□□□ 0.49
SSSCA1-202ENST00000526433 MKRN4PQ13434 485 aaPredicted RBP18.14■□□□□ 0.49
SSSCA1-202ENST00000526433 KIZQ2M2Z5 673 aa18.14■□□□□ 0.49
SSSCA1-202ENST00000526433 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.14■□□□□ 0.49
SSSCA1-202ENST00000526433 TSHZ1Q6ZSZ6 1077 aa18.14■□□□□ 0.49
SSSCA1-202ENST00000526433 CATSPER3Q86XQ3 398 aa18.14■□□□□ 0.49
SSSCA1-202ENST00000526433 ERMNQ8TAM6 284 aa18.14■□□□□ 0.49
SSSCA1-202ENST00000526433 PPP1R16BQ96T49 567 aa18.14■□□□□ 0.49
SSSCA1-202ENST00000526433 POLR3CQ9BUI4 534 aaPredicted RBP18.14■□□□□ 0.49
SSSCA1-202ENST00000526433 TUFT1Q9NNX1 390 aa18.14■□□□□ 0.49
SSSCA1-202ENST00000526433 MSRAQ9UJ68 235 aa18.14■□□□□ 0.49
SSSCA1-202ENST00000526433 PPME1Q9Y570 386 aa18.14■□□□□ 0.49
SSSCA1-202ENST00000526433 MYO9BQ13459 2157 aa18.14■□□□□ 0.49
SSSCA1-202ENST00000526433 MICAL3Q7RTP6 2002 aa18.13■□□□□ 0.49
SSSCA1-202ENST00000526433 MED24O75448 989 aa18.13■□□□□ 0.49
SSSCA1-202ENST00000526433 HSP90AA1P07900 732 aaKnown RBP18.13■□□□□ 0.49
SSSCA1-202ENST00000526433 XRCC6P12956 609 aaKnown RBP eCLIP18.13■□□□□ 0.49
SSSCA1-202ENST00000526433 DNAJB2P25686 324 aa18.13■□□□□ 0.49
SSSCA1-202ENST00000526433 PRPHP41219 470 aa18.13■□□□□ 0.49
SSSCA1-202ENST00000526433 DNM2P50570 870 aa18.13■□□□□ 0.49
SSSCA1-202ENST00000526433 CRYBB1P53674 252 aaPredicted RBP18.13■□□□□ 0.49
SSSCA1-202ENST00000526433 NLRP11P59045 1033 aaKnown RBP18.13■□□□□ 0.49
SSSCA1-202ENST00000526433 DEFB103AP81534 67 aa18.13■□□□□ 0.49
SSSCA1-202ENST00000526433 DRP2Q13474 957 aa18.13■□□□□ 0.49
SSSCA1-202ENST00000526433 RAB30Q15771 203 aa18.13■□□□□ 0.49
SSSCA1-202ENST00000526433 IL17AQ16552 155 aa18.13■□□□□ 0.49
SSSCA1-202ENST00000526433 DTHD1Q6ZMT9 781 aa18.13■□□□□ 0.49
SSSCA1-202ENST00000526433 Q7L0L9 218 aa18.13■□□□□ 0.49
SSSCA1-202ENST00000526433 HERC6Q8IVU3 1022 aa18.13■□□□□ 0.49
SSSCA1-202ENST00000526433 ZNF710Q8N1W2 664 aa18.13■□□□□ 0.49
SSSCA1-202ENST00000526433 DEFB123Q8N688 67 aa18.13■□□□□ 0.49
SSSCA1-202ENST00000526433 JPH2Q9BR39 696 aaPredicted RBP18.13■□□□□ 0.49
SSSCA1-202ENST00000526433 ANKEF1Q9NU02 776 aa18.13■□□□□ 0.49
SSSCA1-202ENST00000526433 LRWD1Q9UFC0 647 aa18.13■□□□□ 0.49
SSSCA1-202ENST00000526433 PADI3Q9ULW8 664 aa18.13■□□□□ 0.49
SSSCA1-202ENST00000526433 MTMR6Q9Y217 621 aa18.13■□□□□ 0.49
SSSCA1-202ENST00000526433 NOC2LQ9Y3T9 749 aaKnown RBP18.13■□□□□ 0.49
SSSCA1-202ENST00000526433 GBF1Q92538 1859 aa18.13■□□□□ 0.49
SSSCA1-202ENST00000526433 PTPRSQ13332 1948 aa18.12■□□□□ 0.49
SSSCA1-202ENST00000526433 ENPP3O14638 875 aa18.12■□□□□ 0.49
SSSCA1-202ENST00000526433 STX6O43752 255 aa18.12■□□□□ 0.49
SSSCA1-202ENST00000526433 RPA1P27694 616 aa18.12■□□□□ 0.49
SSSCA1-202ENST00000526433 RFC5P40937 340 aa18.12■□□□□ 0.49
SSSCA1-202ENST00000526433 ATP2C1P98194 919 aaPredicted RBP18.12■□□□□ 0.49
SSSCA1-202ENST00000526433 TMCO2Q7Z6W1 182 aaPredicted RBP18.12■□□□□ 0.49
SSSCA1-202ENST00000526433 EXOC8Q8IYI6 725 aa18.12■□□□□ 0.49
SSSCA1-202ENST00000526433 PIGOQ8TEQ8 1089 aa18.12■□□□□ 0.49
SSSCA1-202ENST00000526433 TIFAQ96CG3 184 aa18.12■□□□□ 0.49
SSSCA1-202ENST00000526433 ZNF668Q96K58 619 aaPredicted RBP18.12■□□□□ 0.49
SSSCA1-202ENST00000526433 OSMRQ99650 979 aa18.12■□□□□ 0.49
SSSCA1-202ENST00000526433 RAB34Q9BZG1 259 aa18.12■□□□□ 0.49
SSSCA1-202ENST00000526433 ADAMTS10Q9H324 1103 aa18.12■□□□□ 0.49
SSSCA1-202ENST00000526433 SEMA6BQ9H3T3 888 aa18.12■□□□□ 0.49
SSSCA1-202ENST00000526433 DHX33Q9H6R0 707 aaKnown RBP18.12■□□□□ 0.49
SSSCA1-202ENST00000526433 SUCLA2Q9P2R7 463 aaPredicted RBP18.12■□□□□ 0.49
SSSCA1-202ENST00000526433 YBX2Q9Y2T7 364 aaKnown RBP18.12■□□□□ 0.49
SSSCA1-202ENST00000526433 PCDHA11Q9Y5I1 949 aa18.12■□□□□ 0.49
SSSCA1-202ENST00000526433 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.11■□□□□ 0.49
SSSCA1-202ENST00000526433 RPS6KA5O75582 802 aa18.11■□□□□ 0.49
SSSCA1-202ENST00000526433 AMHP03971 560 aa18.11■□□□□ 0.49
SSSCA1-202ENST00000526433 MYOGP15173 224 aa18.11■□□□□ 0.49
SSSCA1-202ENST00000526433 GPC3P51654 580 aa18.11■□□□□ 0.49
SSSCA1-202ENST00000526433 POLGP54098 1239 aaPredicted RBP18.11■□□□□ 0.49
SSSCA1-202ENST00000526433 CDC42EP1Q00587 391 aa18.11■□□□□ 0.49
SSSCA1-202ENST00000526433 NFX1Q12986 1120 aaKnown RBP18.11■□□□□ 0.49
SSSCA1-202ENST00000526433 RESTQ13127 1097 aa18.11■□□□□ 0.49
SSSCA1-202ENST00000526433 PAK2Q13177 524 aa18.11■□□□□ 0.49
SSSCA1-202ENST00000526433 ZNF697Q5TEC3 545 aa18.11■□□□□ 0.49
SSSCA1-202ENST00000526433 IGSF22Q8N9C0 903 aa18.11■□□□□ 0.49
SSSCA1-202ENST00000526433 SPRYD3Q8NCJ5 442 aa18.11■□□□□ 0.49
SSSCA1-202ENST00000526433 TMEM40Q8WWA1 233 aa18.11■□□□□ 0.49
SSSCA1-202ENST00000526433 SLC7A3Q8WY07 619 aa18.11■□□□□ 0.49
SSSCA1-202ENST00000526433 NACC1Q96RE7 527 aa18.11■□□□□ 0.49
SSSCA1-202ENST00000526433 ZBED2Q9BTP6 218 aa18.11■□□□□ 0.49
SSSCA1-202ENST00000526433 CCT6AP40227 531 aaKnown RBP18.1■□□□□ 0.49
SSSCA1-202ENST00000526433 FAM117BQ6P1L5 589 aa18.1■□□□□ 0.49
SSSCA1-202ENST00000526433 RTN4RL1Q86UN2 441 aaPredicted RBP18.1■□□□□ 0.49
SSSCA1-202ENST00000526433 MYOCDQ8IZQ8 938 aa18.1■□□□□ 0.49
SSSCA1-202ENST00000526433 TMEM143Q96AN5 459 aa18.1■□□□□ 0.49
SSSCA1-202ENST00000526433 FAM161BQ96MY7 647 aa18.1■□□□□ 0.49
SSSCA1-202ENST00000526433 NKX2-4Q9H2Z4 354 aa18.1■□□□□ 0.49
SSSCA1-202ENST00000526433 TTYH1Q9H313 450 aaPredicted RBP18.1■□□□□ 0.49
SSSCA1-202ENST00000526433 ERVK-5Q9HDB9 667 aa18.1■□□□□ 0.49
SSSCA1-202ENST00000526433 ST3GAL5Q9UNP4 418 aa18.1■□□□□ 0.49
SSSCA1-202ENST00000526433 STK24Q9Y6E0 443 aa18.1■□□□□ 0.49
SSSCA1-202ENST00000526433 TMEM265A0A087WTH1 108 aa18.09■□□□□ 0.49
SSSCA1-202ENST00000526433 GPR182O15218 404 aa18.09■□□□□ 0.49
SSSCA1-202ENST00000526433 GJB5O95377 273 aa18.09■□□□□ 0.49
SSSCA1-202ENST00000526433 MUTP22033 750 aa18.09■□□□□ 0.49
SSSCA1-202ENST00000526433 EIF4BP23588 611 aaKnown RBP18.09■□□□□ 0.49
SSSCA1-202ENST00000526433 RARRES1P49788 294 aa18.09■□□□□ 0.49
SSSCA1-202ENST00000526433 EMC2Q15006 297 aa18.09■□□□□ 0.49
SSSCA1-202ENST00000526433 SF3A1Q15459 793 aaKnown RBP18.09■□□□□ 0.49
SSSCA1-202ENST00000526433 ECM1Q16610 540 aa18.09■□□□□ 0.49
SSSCA1-202ENST00000526433 ODR4Q5SWX8 454 aa18.09■□□□□ 0.49
SSSCA1-202ENST00000526433 ARL6IP4Q66PJ3 421 aaKnown RBP18.09■□□□□ 0.49
SSSCA1-202ENST00000526433 HAUS3Q68CZ6 603 aa18.09■□□□□ 0.49
SSSCA1-202ENST00000526433 FAM173BQ6P4H8 233 aa18.09■□□□□ 0.49
SSSCA1-202ENST00000526433 POTEGQ6S5H5 508 aa18.09■□□□□ 0.49
SSSCA1-202ENST00000526433 RHPN2Q8IUC4 686 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms