RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.5□□□□□ -1.37
SVIP-202ENST00000525670 ABCC4O15439 1325 aa6.5□□□□□ -1.37
SVIP-202ENST00000525670 ZBED9Q6R2W3 1325 aa6.5□□□□□ -1.37
SVIP-202ENST00000525670 CACNA1FO60840 1977 aa6.49□□□□□ -1.37
SVIP-202ENST00000525670 OTOL1A6NHN0 477 aaPredicted RBP6.49□□□□□ -1.37
SVIP-202ENST00000525670 IGKV5-2P06315 115 aa6.49□□□□□ -1.37
SVIP-202ENST00000525670 EPHX1P07099 455 aa6.49□□□□□ -1.37
SVIP-202ENST00000525670 GJA8P48165 433 aa6.49□□□□□ -1.37
SVIP-202ENST00000525670 TGFB2P61812 414 aa6.49□□□□□ -1.37
SVIP-202ENST00000525670 PRR5P85299 388 aa6.49□□□□□ -1.37
SVIP-202ENST00000525670 NEXNQ0ZGT2 675 aa6.49□□□□□ -1.37
SVIP-202ENST00000525670 PARP10Q53GL7 1025 aa6.49□□□□□ -1.37
SVIP-202ENST00000525670 KSR2Q6VAB6 950 aa6.49□□□□□ -1.37
SVIP-202ENST00000525670 ARHGEF39Q8N4T4 335 aa6.49□□□□□ -1.37
SVIP-202ENST00000525670 TTLL6Q8N841 843 aa6.49□□□□□ -1.37
SVIP-202ENST00000525670 DNAAF4Q8WXU2 420 aa6.49□□□□□ -1.37
SVIP-202ENST00000525670 RCC1LQ96I51 464 aaKnown RBP6.49□□□□□ -1.37
SVIP-202ENST00000525670 GPR101Q96P66 508 aaPredicted RBP6.49□□□□□ -1.37
SVIP-202ENST00000525670 MCMBPQ9BTE3 642 aa6.49□□□□□ -1.37
SVIP-202ENST00000525670 ISCA1Q9BUE6 129 aa6.49□□□□□ -1.37
SVIP-202ENST00000525670 BRIP1Q9BX63 1249 aa6.49□□□□□ -1.37
SVIP-202ENST00000525670 CWC25Q9NXE8 425 aaPredicted RBP6.49□□□□□ -1.37
SVIP-202ENST00000525670 DBR1Q9UK59 544 aaKnown RBP6.49□□□□□ -1.37
SVIP-202ENST00000525670 HCFC2Q9Y5Z7 792 aa6.49□□□□□ -1.37
SVIP-202ENST00000525670 SH3TC1Q8TE82 1336 aa6.49□□□□□ -1.37
SVIP-202ENST00000525670 IBTKQ9P2D0 1353 aaPredicted RBP6.48□□□□□ -1.37
SVIP-202ENST00000525670 FER1L6Q2WGJ9 1857 aa6.48□□□□□ -1.37
SVIP-202ENST00000525670 BCAR3O75815 825 aa6.48□□□□□ -1.37
SVIP-202ENST00000525670 SRGNP10124 158 aa6.48□□□□□ -1.37
SVIP-202ENST00000525670 SYN1P17600 705 aa6.48□□□□□ -1.37
SVIP-202ENST00000525670 TACR1P25103 407 aa6.48□□□□□ -1.37
SVIP-202ENST00000525670 NT5DC4Q86YG4 428 aa6.48□□□□□ -1.37
SVIP-202ENST00000525670 TP53I13Q8NBR0 393 aaPredicted RBP6.48□□□□□ -1.37
SVIP-202ENST00000525670 CXorf38Q8TB03 319 aa6.48□□□□□ -1.37
SVIP-202ENST00000525670 FEZF2Q8TBJ5 459 aa6.48□□□□□ -1.37
SVIP-202ENST00000525670 KLHL6Q8WZ60 621 aa6.48□□□□□ -1.37
SVIP-202ENST00000525670 MASTLQ96GX5 879 aa6.48□□□□□ -1.37
SVIP-202ENST00000525670 FGD4Q96M96 766 aa6.48□□□□□ -1.37
SVIP-202ENST00000525670 RNF38Q9H0F5 515 aa6.48□□□□□ -1.37
SVIP-202ENST00000525670 RNF181Q9P0P0 153 aa6.48□□□□□ -1.37
SVIP-202ENST00000525670 SBF1O95248 1867 aa6.47□□□□□ -1.37
SVIP-202ENST00000525670 ZC3H12DA2A288 527 aaKnown RBP6.47□□□□□ -1.37
SVIP-202ENST00000525670 C2orf71A6NGG8 1288 aa6.47□□□□□ -1.37
SVIP-202ENST00000525670 GLI4P10075 376 aa6.47□□□□□ -1.37
SVIP-202ENST00000525670 NPR1P16066 1061 aa6.47□□□□□ -1.37
SVIP-202ENST00000525670 LIMS1P48059 325 aa6.47□□□□□ -1.37
SVIP-202ENST00000525670 SEPHS1P49903 392 aa6.47□□□□□ -1.37
SVIP-202ENST00000525670 PRELPP51888 382 aa6.47□□□□□ -1.37
SVIP-202ENST00000525670 CASP7P55210 303 aa6.47□□□□□ -1.37
SVIP-202ENST00000525670 FOXO4P98177 505 aa6.47□□□□□ -1.37
SVIP-202ENST00000525670 HDLBPQ00341 1268 aaKnown RBP6.47□□□□□ -1.37
SVIP-202ENST00000525670 AMPD2Q01433 879 aa6.47□□□□□ -1.37
SVIP-202ENST00000525670 GRB10Q13322 594 aa6.47□□□□□ -1.37
SVIP-202ENST00000525670 PPP2R5EQ16537 467 aa6.47□□□□□ -1.37
SVIP-202ENST00000525670 DPY19L1Q2PZI1 675 aa6.47□□□□□ -1.37
SVIP-202ENST00000525670 C9orf131Q5VYM1 1079 aa6.47□□□□□ -1.37
SVIP-202ENST00000525670 CPLX3Q8WVH0 158 aa6.47□□□□□ -1.37
SVIP-202ENST00000525670 CELF1Q92879 486 aaKnown RBP6.47□□□□□ -1.37
SVIP-202ENST00000525670 SHDQ96IW2 340 aa6.47□□□□□ -1.37
SVIP-202ENST00000525670 ZNF277Q9NRM2 450 aaPredicted RBP6.47□□□□□ -1.37
SVIP-202ENST00000525670 CGGBP1Q9UFW8 167 aaPredicted RBP6.47□□□□□ -1.37
SVIP-202ENST00000525670 NOB1Q9ULX3 412 aaKnown RBP6.47□□□□□ -1.37
SVIP-202ENST00000525670 RIC1Q4ADV7 1423 aa6.47□□□□□ -1.37
SVIP-202ENST00000525670 COL4A5P29400 1685 aa6.46□□□□□ -1.37
SVIP-202ENST00000525670 LRRC37AA6NMS7 1700 aa6.46□□□□□ -1.38
SVIP-202ENST00000525670 STXBP3O00186 592 aa6.46□□□□□ -1.38
SVIP-202ENST00000525670 FFAR3O14843 346 aa6.46□□□□□ -1.38
SVIP-202ENST00000525670 NCAM1P13591 858 aa6.46□□□□□ -1.38
SVIP-202ENST00000525670 ATF2P15336 505 aa6.46□□□□□ -1.38
SVIP-202ENST00000525670 NASPP49321 788 aaPredicted RBP6.46□□□□□ -1.38
SVIP-202ENST00000525670 RARSP54136 660 aaKnown RBP6.46□□□□□ -1.38
SVIP-202ENST00000525670 LCE5AQ5TCM9 118 aa6.46□□□□□ -1.38
SVIP-202ENST00000525670 STYK1Q6J9G0 422 aa6.46□□□□□ -1.38
SVIP-202ENST00000525670 DDX46Q7L014 1031 aaKnown RBP6.46□□□□□ -1.38
SVIP-202ENST00000525670 CABP7Q86V35 215 aa6.46□□□□□ -1.38
SVIP-202ENST00000525670 ZDHHC14Q8IZN3 488 aa6.46□□□□□ -1.38
SVIP-202ENST00000525670 LZTR1Q8N653 840 aa6.46□□□□□ -1.38
SVIP-202ENST00000525670 ZBTB38Q8NAP3 1195 aaPredicted RBP6.46□□□□□ -1.38
SVIP-202ENST00000525670 SYT8Q8NBV8 401 aa6.46□□□□□ -1.38
SVIP-202ENST00000525670 RBM17Q96I25 401 aaKnown RBP6.46□□□□□ -1.38
SVIP-202ENST00000525670 SEC16BQ96JE7 1060 aa6.46□□□□□ -1.38
SVIP-202ENST00000525670 KRTAP4-11Q9BYQ6 195 aa6.46□□□□□ -1.38
SVIP-202ENST00000525670 TAOK3Q9H2K8 898 aa6.46□□□□□ -1.38
SVIP-202ENST00000525670 GREM2Q9H772 168 aa6.46□□□□□ -1.38
SVIP-202ENST00000525670 SUSD2Q9UGT4 822 aa6.46□□□□□ -1.38
SVIP-202ENST00000525670 BACE2Q9Y5Z0 518 aa6.46□□□□□ -1.38
SVIP-202ENST00000525670 A0A1B0GUL6 1792 aa6.46□□□□□ -1.38
SVIP-202ENST00000525670 DUOX1Q9NRD9 1551 aa6.45□□□□□ -1.38
SVIP-202ENST00000525670 TRBV23OR9-2A0A075B6M9 112 aa6.45□□□□□ -1.38
SVIP-202ENST00000525670 PLIN1O60240 522 aa6.45□□□□□ -1.38
SVIP-202ENST00000525670 PCCAP05165 728 aaPredicted RBP6.45□□□□□ -1.38
SVIP-202ENST00000525670 GCKRQ14397 625 aa6.45□□□□□ -1.38
SVIP-202ENST00000525670 CRY2Q49AN0 593 aa6.45□□□□□ -1.38
SVIP-202ENST00000525670 CCDC93Q567U6 631 aa6.45□□□□□ -1.38
SVIP-202ENST00000525670 EPHA10Q5JZY3 1008 aa6.45□□□□□ -1.38
SVIP-202ENST00000525670 BEND3Q5T5X7 828 aa6.45□□□□□ -1.38
SVIP-202ENST00000525670 TRMT2AQ8IZ69 625 aaKnown RBP6.45□□□□□ -1.38
SVIP-202ENST00000525670 CCDC191Q8NCU4 936 aa6.45□□□□□ -1.38
SVIP-202ENST00000525670 MRRFQ96E11 262 aaKnown RBP6.45□□□□□ -1.38
SVIP-202ENST00000525670 TSPAN17Q96FV3 270 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms