RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 PABPC5Q96DU9 382 aaKnown RBP10□□□□□ -0.81
CTNNA1-240ENST00000523912 NAP1L4Q99733 375 aaKnown RBP10□□□□□ -0.81
CTNNA1-240ENST00000523912 SLKQ9H2G2 1235 aaPredicted RBP10□□□□□ -0.81
CTNNA1-240ENST00000523912 RC3H2Q9HBD1 1191 aaKnown RBP10□□□□□ -0.81
CTNNA1-240ENST00000523912 ERVK-5Q9HDB9 667 aa10□□□□□ -0.81
CTNNA1-240ENST00000523912 AAASQ9NRG9 546 aa10□□□□□ -0.81
CTNNA1-240ENST00000523912 PCDHB7Q9Y5E2 793 aa10□□□□□ -0.81
CTNNA1-240ENST00000523912 XIRP2A4UGR9 3374 aa10□□□□□ -0.81
CTNNA1-240ENST00000523912 CCDC194A0A1B0GVG4 234 aa9.99□□□□□ -0.81
CTNNA1-240ENST00000523912 ZBTB42B2RXF5 422 aa9.99□□□□□ -0.81
CTNNA1-240ENST00000523912 HOXA2O43364 376 aa9.99□□□□□ -0.81
CTNNA1-240ENST00000523912 MMP1P03956 469 aa9.99□□□□□ -0.81
CTNNA1-240ENST00000523912 ANAPC15P60006 121 aa9.99□□□□□ -0.81
CTNNA1-240ENST00000523912 CDC42EP1Q00587 391 aa9.99□□□□□ -0.81
CTNNA1-240ENST00000523912 TBC1D8BQ0IIM8 1120 aa9.99□□□□□ -0.81
CTNNA1-240ENST00000523912 CSPP1Q1MSJ5 1256 aa9.99□□□□□ -0.81
CTNNA1-240ENST00000523912 PAN2Q504Q3 1202 aaKnown RBP9.99□□□□□ -0.81
CTNNA1-240ENST00000523912 SPOUT1Q5T280 376 aaKnown RBP9.99□□□□□ -0.81
CTNNA1-240ENST00000523912 ERICH6BQ5W0A0 696 aa9.99□□□□□ -0.81
CTNNA1-240ENST00000523912 SLC24A5Q71RS6 500 aa9.99□□□□□ -0.81
CTNNA1-240ENST00000523912 MIER3Q7Z3K6 550 aa9.99□□□□□ -0.81
CTNNA1-240ENST00000523912 P2RX5Q93086 422 aa9.99□□□□□ -0.81
CTNNA1-240ENST00000523912 ZNF689Q96CS4 500 aaPredicted RBP9.99□□□□□ -0.81
CTNNA1-240ENST00000523912 PPP1R16BQ96T49 567 aa9.99□□□□□ -0.81
CTNNA1-240ENST00000523912 OSMRQ99650 979 aa9.99□□□□□ -0.81
CTNNA1-240ENST00000523912 ATP6V0A4Q9HBG4 840 aa9.99□□□□□ -0.81
CTNNA1-240ENST00000523912 BRMS1Q9HCU9 246 aa9.99□□□□□ -0.81
CTNNA1-240ENST00000523912 PPP4R2Q9NY27 417 aa9.99□□□□□ -0.81
CTNNA1-240ENST00000523912 DDX25Q9UHL0 483 aaKnown RBP9.99□□□□□ -0.81
CTNNA1-240ENST00000523912 ST3GAL5Q9UNP4 418 aa9.99□□□□□ -0.81
CTNNA1-240ENST00000523912 NOC2LQ9Y3T9 749 aaKnown RBP9.99□□□□□ -0.81
CTNNA1-240ENST00000523912 MRPL42Q9Y6G3 142 aaKnown RBP9.99□□□□□ -0.81
CTNNA1-240ENST00000523912 STK36Q9NRP7 1315 aa9.99□□□□□ -0.81
CTNNA1-240ENST00000523912 MYO7AQ13402 2215 aa9.99□□□□□ -0.81
CTNNA1-240ENST00000523912 CYP3A7-CYP3A51PA0A087WV96 503 aa9.98□□□□□ -0.81
CTNNA1-240ENST00000523912 FSD2A1L4K1 749 aa9.98□□□□□ -0.81
CTNNA1-240ENST00000523912 C19orf67A6NJJ6 358 aa9.98□□□□□ -0.81
CTNNA1-240ENST00000523912 TBKBP1A7MCY6 615 aa9.98□□□□□ -0.81
CTNNA1-240ENST00000523912 DCXO43602 365 aa9.98□□□□□ -0.81
CTNNA1-240ENST00000523912 MARCH6O60337 910 aa9.98□□□□□ -0.81
CTNNA1-240ENST00000523912 DKC1O60832 514 aaKnown RBP eCLIP9.98□□□□□ -0.81
CTNNA1-240ENST00000523912 VTNP04004 478 aa9.98□□□□□ -0.81
CTNNA1-240ENST00000523912 IL9P15248 144 aa9.98□□□□□ -0.81
CTNNA1-240ENST00000523912 GCFC2P16383 781 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-240ENST00000523912 ZSCAN20P17040 1043 aaPredicted RBP9.98□□□□□ -0.81
CTNNA1-240ENST00000523912 ATP4AP20648 1035 aa9.98□□□□□ -0.81
CTNNA1-240ENST00000523912 CYP3A7P24462 503 aa9.98□□□□□ -0.81
CTNNA1-240ENST00000523912 SSTR3P32745 418 aaPredicted RBP9.98□□□□□ -0.81
CTNNA1-240ENST00000523912 DNM2P50570 870 aa9.98□□□□□ -0.81
CTNNA1-240ENST00000523912 CLCN3P51790 818 aa9.98□□□□□ -0.81
CTNNA1-240ENST00000523912 XKR3Q5GH77 459 aa9.98□□□□□ -0.81
CTNNA1-240ENST00000523912 EFCAB12Q6NXP0 572 aa9.98□□□□□ -0.81
CTNNA1-240ENST00000523912 ABI1Q8IZP0 508 aa9.98□□□□□ -0.81
CTNNA1-240ENST00000523912 NLRP7Q8WX94 980 aa9.98□□□□□ -0.81
CTNNA1-240ENST00000523912 ADAM2Q99965 735 aa9.98□□□□□ -0.81
CTNNA1-240ENST00000523912 JPH2Q9BR39 696 aaPredicted RBP9.98□□□□□ -0.81
CTNNA1-240ENST00000523912 TMX1Q9H3N1 280 aa9.98□□□□□ -0.81
CTNNA1-240ENST00000523912 UNC45AQ9H3U1 944 aa9.98□□□□□ -0.81
CTNNA1-240ENST00000523912 RGS18Q9NS28 235 aa9.98□□□□□ -0.81
CTNNA1-240ENST00000523912 CLDND1Q9NY35 253 aa9.98□□□□□ -0.81
CTNNA1-240ENST00000523912 SEPT9Q9UHD8 586 aaPredicted RBP9.98□□□□□ -0.81
CTNNA1-240ENST00000523912 PCDHB12Q9Y5F1 795 aa9.98□□□□□ -0.81
CTNNA1-240ENST00000523912 TTC3P53804 2025 aa9.98□□□□□ -0.81
CTNNA1-240ENST00000523912 FAM86C2PA6NEL3 165 aa9.97□□□□□ -0.81
CTNNA1-240ENST00000523912 H3BQ06 376 aaPredicted RBP9.97□□□□□ -0.81
CTNNA1-240ENST00000523912 ADAMTS3O15072 1205 aa9.97□□□□□ -0.81
CTNNA1-240ENST00000523912 GRM6O15303 877 aa9.97□□□□□ -0.81
CTNNA1-240ENST00000523912 CSPG5O95196 566 aa9.97□□□□□ -0.81
CTNNA1-240ENST00000523912 TDP2O95551 362 aa9.97□□□□□ -0.81
CTNNA1-240ENST00000523912 UBE3AQ05086 875 aa9.97□□□□□ -0.81
CTNNA1-240ENST00000523912 LETM2Q2VYF4 491 aa9.97□□□□□ -0.81
CTNNA1-240ENST00000523912 NEK8Q86SG6 692 aa9.97□□□□□ -0.81
CTNNA1-240ENST00000523912 RTN4RL1Q86UN2 441 aaPredicted RBP9.97□□□□□ -0.81
CTNNA1-240ENST00000523912 FAM228AQ86W67 206 aa9.97□□□□□ -0.81
CTNNA1-240ENST00000523912 ADHFE1Q8IWW8 467 aa9.97□□□□□ -0.81
CTNNA1-240ENST00000523912 TMEM40Q8WWA1 233 aa9.97□□□□□ -0.81
CTNNA1-240ENST00000523912 LARP6Q9BRS8 491 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-240ENST00000523912 ELAC1Q9H777 363 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-240ENST00000523912 TMEM161AQ9NX61 479 aa9.97□□□□□ -0.81
CTNNA1-240ENST00000523912 PLAGL2Q9UPG8 496 aa9.97□□□□□ -0.81
CTNNA1-240ENST00000523912 RBAK-RBAKDNI3L0D1 243 aa9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 ZNF862O60290 1169 aa9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 PFKFB2O60825 505 aa9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 GPR32O75388 356 aa9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 PSMD10O75832 226 aa9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 LINC00271P0C7V0 271 aa9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 SRGAP2BP0DMP2 458 aa9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 DARSP14868 501 aaKnown RBP9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 LAG3P18627 525 aa9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 SFPQP23246 707 aaKnown RBP eCLIP9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 EIF4BP23588 611 aaKnown RBP9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 PPM1AP35813 382 aa9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 GPC3P51654 580 aa9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 NLRP11P59045 1033 aaKnown RBP9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 PSMC5P62195 406 aa9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 ZP2Q05996 745 aa9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 SCRN1Q12765 414 aa9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 UGCGQ16739 394 aa9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 INF2Q27J81 1249 aa9.96□□□□□ -0.82
CTNNA1-240ENST00000523912 CTC1Q2NKJ3 1217 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms