RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 IQCA1LA6NCM1 817 aa6.08□□□□□ -1.44
NSMCE2-211ENST00000523549 FAM90A27PA6NNH2 459 aa6.08□□□□□ -1.44
NSMCE2-211ENST00000523549 WNT9AO14904 365 aa6.08□□□□□ -1.44
NSMCE2-211ENST00000523549 ACO1P21399 889 aaKnown RBP6.08□□□□□ -1.44
NSMCE2-211ENST00000523549 TGFB2P61812 414 aa6.08□□□□□ -1.44
NSMCE2-211ENST00000523549 ARID5AQ03989 594 aa6.08□□□□□ -1.44
NSMCE2-211ENST00000523549 GNL2Q13823 731 aaKnown RBP6.08□□□□□ -1.44
NSMCE2-211ENST00000523549 NFYCQ13952 458 aa6.08□□□□□ -1.44
NSMCE2-211ENST00000523549 NOLC1Q14978 699 aaKnown RBP eCLIP6.08□□□□□ -1.44
NSMCE2-211ENST00000523549 DPP8Q6V1X1 898 aaPredicted RBP6.08□□□□□ -1.44
NSMCE2-211ENST00000523549 AMER2Q8N7J2 671 aa6.08□□□□□ -1.44
NSMCE2-211ENST00000523549 DIP2AQ14689 1571 aa6.08□□□□□ -1.44
NSMCE2-211ENST00000523549 RTEL1-TNFRSF6BF6WH68 1400 aa6.08□□□□□ -1.44
NSMCE2-211ENST00000523549 CTTNBP2Q8WZ74 1663 aa6.07□□□□□ -1.44
NSMCE2-211ENST00000523549 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.07□□□□□ -1.44
NSMCE2-211ENST00000523549 PURAQ00577 322 aaKnown RBP6.07□□□□□ -1.44
NSMCE2-211ENST00000523549 TBR1Q16650 682 aa6.07□□□□□ -1.44
NSMCE2-211ENST00000523549 ZMAT1Q5H9K5 638 aa6.07□□□□□ -1.44
NSMCE2-211ENST00000523549 YOD1Q5VVQ6 348 aaPredicted RBP6.07□□□□□ -1.44
NSMCE2-211ENST00000523549 BTBD8Q5XKL5 378 aa6.07□□□□□ -1.44
NSMCE2-211ENST00000523549 ANKS3Q6ZW76 656 aa6.07□□□□□ -1.44
NSMCE2-211ENST00000523549 POLNQ7Z5Q5 900 aa6.07□□□□□ -1.44
NSMCE2-211ENST00000523549 ST13P5Q8NFI4 369 aaPredicted RBP6.07□□□□□ -1.44
NSMCE2-211ENST00000523549 SCYL1Q96KG9 808 aa6.07□□□□□ -1.44
NSMCE2-211ENST00000523549 C8orf37Q96NL8 207 aa6.07□□□□□ -1.44
NSMCE2-211ENST00000523549 ZDHHC5Q9C0B5 715 aa6.07□□□□□ -1.44
NSMCE2-211ENST00000523549 CARMIL1Q5VZK9 1371 aa6.06□□□□□ -1.44
NSMCE2-211ENST00000523549 KDM5DQ9BY66 1539 aa6.06□□□□□ -1.44
NSMCE2-211ENST00000523549 TRAV20A0A0B4J274 112 aa6.06□□□□□ -1.44
NSMCE2-211ENST00000523549 PTPN1P18031 435 aaKnown RBP6.06□□□□□ -1.44
NSMCE2-211ENST00000523549 ETV4P43268 484 aa6.06□□□□□ -1.44
NSMCE2-211ENST00000523549 DGCR2P98153 550 aa6.06□□□□□ -1.44
NSMCE2-211ENST00000523549 PTH1RQ03431 593 aa6.06□□□□□ -1.44
NSMCE2-211ENST00000523549 IFRD2Q12894 506 aaPredicted RBP6.06□□□□□ -1.44
NSMCE2-211ENST00000523549 NLGN4XQ8N0W4 816 aa6.06□□□□□ -1.44
NSMCE2-211ENST00000523549 CFHR4Q92496 578 aa6.06□□□□□ -1.44
NSMCE2-211ENST00000523549 GMLQ99445 158 aa6.06□□□□□ -1.44
NSMCE2-211ENST00000523549 DPYSL5Q9BPU6 564 aa6.06□□□□□ -1.44
NSMCE2-211ENST00000523549 SRPK3Q9UPE1 567 aa6.06□□□□□ -1.44
NSMCE2-211ENST00000523549 ZNF518AQ6AHZ1 1483 aa6.06□□□□□ -1.44
NSMCE2-211ENST00000523549 MYO5CQ9NQX4 1742 aa6.05□□□□□ -1.44
NSMCE2-211ENST00000523549 AMY2AP04746 511 aa6.05□□□□□ -1.44
NSMCE2-211ENST00000523549 TCF3P15923 654 aa6.05□□□□□ -1.44
NSMCE2-211ENST00000523549 AMY2BP19961 511 aa6.05□□□□□ -1.44
NSMCE2-211ENST00000523549 KRTAP1-1Q07627 177 aa6.05□□□□□ -1.44
NSMCE2-211ENST00000523549 STILQ15468 1287 aa6.05□□□□□ -1.44
NSMCE2-211ENST00000523549 GPR19Q15760 415 aa6.05□□□□□ -1.44
NSMCE2-211ENST00000523549 ZNF568Q3ZCX4 644 aa6.05□□□□□ -1.44
NSMCE2-211ENST00000523549 ARHGAP36Q6ZRI8 547 aa6.05□□□□□ -1.44
NSMCE2-211ENST00000523549 LARP4Q71RC2 724 aaKnown RBP eCLIP6.05□□□□□ -1.44
NSMCE2-211ENST00000523549 CXXC5Q7LFL8 322 aaKnown RBP6.05□□□□□ -1.44
NSMCE2-211ENST00000523549 IL17DQ8TAD2 202 aa6.05□□□□□ -1.44
NSMCE2-211ENST00000523549 CHFRQ96EP1 664 aa6.05□□□□□ -1.44
NSMCE2-211ENST00000523549 ALG1Q9BT22 464 aa6.05□□□□□ -1.44
NSMCE2-211ENST00000523549 R3HCC1Q9Y3T6 440 aaKnown RBP6.05□□□□□ -1.44
NSMCE2-211ENST00000523549 TRAF6Q9Y4K3 522 aa6.05□□□□□ -1.44
NSMCE2-211ENST00000523549 AHDC1Q5TGY3 1603 aaPredicted RBP6.05□□□□□ -1.44
NSMCE2-211ENST00000523549 KIDINS220Q9ULH0 1771 aa6.05□□□□□ -1.44
NSMCE2-211ENST00000523549 TIAM1Q13009 1591 aa6.05□□□□□ -1.44
NSMCE2-211ENST00000523549 TMEM94Q12767 1356 aa6.05□□□□□ -1.44
NSMCE2-211ENST00000523549 CDC14BO60729 498 aa6.04□□□□□ -1.44
NSMCE2-211ENST00000523549 ZNF202O95125 648 aa6.04□□□□□ -1.44
NSMCE2-211ENST00000523549 IL13RA1P78552 427 aa6.04□□□□□ -1.44
NSMCE2-211ENST00000523549 DPTQ07507 201 aa6.04□□□□□ -1.44
NSMCE2-211ENST00000523549 ABHD18Q0P651 414 aa6.04□□□□□ -1.44
NSMCE2-211ENST00000523549 EIF4HQ15056 248 aaKnown RBP6.04□□□□□ -1.44
NSMCE2-211ENST00000523549 LSM12Q3MHD2 195 aaKnown RBP6.04□□□□□ -1.44
NSMCE2-211ENST00000523549 TRIM68Q6AZZ1 485 aa6.04□□□□□ -1.44
NSMCE2-211ENST00000523549 DPH6Q7L8W6 267 aa6.04□□□□□ -1.44
NSMCE2-211ENST00000523549 LRRC47Q8N1G4 583 aaKnown RBP6.04□□□□□ -1.44
NSMCE2-211ENST00000523549 ZNF669Q96BR6 464 aaPredicted RBP6.04□□□□□ -1.44
NSMCE2-211ENST00000523549 WNK4Q96J92 1243 aa6.04□□□□□ -1.44
NSMCE2-211ENST00000523549 PLA2G12BQ9BX93 195 aa6.04□□□□□ -1.44
NSMCE2-211ENST00000523549 MSL2Q9HCI7 577 aa6.04□□□□□ -1.44
NSMCE2-211ENST00000523549 GALNT8Q9NY28 637 aa6.04□□□□□ -1.44
NSMCE2-211ENST00000523549 BTBD7Q9P203 1132 aa6.04□□□□□ -1.44
NSMCE2-211ENST00000523549 PCNTO95613 3336 aa6.04□□□□□ -1.44
NSMCE2-211ENST00000523549 MAN2B1O00754 1011 aa6.03□□□□□ -1.44
NSMCE2-211ENST00000523549 ARHGAP6O43182 974 aa6.03□□□□□ -1.44
NSMCE2-211ENST00000523549 C1SP09871 688 aa6.03□□□□□ -1.44
NSMCE2-211ENST00000523549 RRADP55042 308 aa6.03□□□□□ -1.44
NSMCE2-211ENST00000523549 PAK1Q13153 545 aa6.03□□□□□ -1.44
NSMCE2-211ENST00000523549 C1orf210Q8IVY1 113 aa6.03□□□□□ -1.44
NSMCE2-211ENST00000523549 AFAP1Q8N556 730 aa6.03□□□□□ -1.44
NSMCE2-211ENST00000523549 SLC43A3Q8NBI5 491 aa6.03□□□□□ -1.44
NSMCE2-211ENST00000523549 PCDH19Q8TAB3 1148 aa6.03□□□□□ -1.44
NSMCE2-211ENST00000523549 CACTINQ8WUQ7 758 aaKnown RBP6.03□□□□□ -1.44
NSMCE2-211ENST00000523549 RIC8BQ9NVN3 520 aa6.03□□□□□ -1.44
NSMCE2-211ENST00000523549 C11orf21Q9P2W6 132 aa6.03□□□□□ -1.44
NSMCE2-211ENST00000523549 NR2E1Q9Y466 385 aa6.03□□□□□ -1.44
NSMCE2-211ENST00000523549 ATP7AQ04656 1500 aa6.03□□□□□ -1.44
NSMCE2-211ENST00000523549 SHANK3Q9BYB0 1731 aa6.02□□□□□ -1.45
NSMCE2-211ENST00000523549 UNC13BO14795 1591 aa6.02□□□□□ -1.45
NSMCE2-211ENST00000523549 UGGT1Q9NYU2 1555 aa6.02□□□□□ -1.45
NSMCE2-211ENST00000523549 KDM5AP29375 1690 aaKnown RBP6.02□□□□□ -1.45
NSMCE2-211ENST00000523549 C4BPAP04003 597 aaKnown RBP6.02□□□□□ -1.45
NSMCE2-211ENST00000523549 PTGS1P23219 599 aa6.02□□□□□ -1.45
NSMCE2-211ENST00000523549 ACRV1P26436 265 aa6.02□□□□□ -1.45
NSMCE2-211ENST00000523549 RPS19P39019 145 aaKnown RBP6.02□□□□□ -1.45
NSMCE2-211ENST00000523549 FOXL1Q12952 345 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms